Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 26
Filter
Add more filters










Publication year range
1.
J Maxillofac Oral Surg ; 23(3): 531-533, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38911396

ABSTRACT

Background: Most maxillofacial fractures are reduced and fixed with the help of occlusion as a guide. To achieve the same, Maxillo-mandibular fixation (MMF) is one of the common modalities employed. Often placing MMF is cumbersome for both patients and operators. An atraumatic and less time-consuming method would always be gladly accepted by all. Objective: To present a novel modification of conventional MMF, to make the technique less cumbersome. Description: We present a novel technique of criss-cross direct wiring for intra-operative and is a quicker and has better patient compliance. Conclusion: The criss-cross wiring technique is found to be an effective MMF technique for maxillofacial fractures.

2.
Ann Maxillofac Surg ; 13(1): 105-107, 2023.
Article in English | MEDLINE | ID: mdl-37711541

ABSTRACT

Rationale: In Indian subcontinent, every adult may have suffered from chicken pox during their early childhood and harbour the virus, which eventually becomes inactive over years. These latent organisms can undergo sudden activation when triggered by injection of local anaesthesia in the oral cavity. Probably, some symptoms develop along the distribution of the nerve. Patient Concerns: Here, we present a case report of a 55-year-old male patient who reported to us with post-anaesthetic herpetic lesion involving the face unilaterally and also a lesion present in the intraoral cavity not crossing the midline. Diagnosis: The patient was diagnosed as post-anaesthetic herpetic lesion. Treatment: Symptomatic medical management was given. Outcomes: On two month follow-up, the lesion was completely resolved and replaced by healthy tissue. Take-Away Lesson: Medical history should also include a question about past experience with chicken pox before proceeding with extraction.

3.
Sci Rep ; 13(1): 12732, 2023 08 05.
Article in English | MEDLINE | ID: mdl-37543673

ABSTRACT

Chronic inflammation is integral to the development of esophageal adenocarcinoma (EAC) and esophageal squamous cell carcinoma (ESCC), although the latter has not been associated with reflux esophagitis. The L2-IL-1ß transgenic mice, expressing human interleukin (IL)-1ß in the oral, esophageal and forestomach squamous epithelia feature chronic inflammation and a stepwise development of Barrett's esophagus-like metaplasia, dysplasia and adenocarcinoma at the squamo-columnar junction. However, the functional consequences of IL-1ß-mediated chronic inflammation in the oral and esophageal squamous epithelia remain elusive. We report for the first time that in addition to the previously described Barrett's esophagus-like metaplasia, the L2-IL-1ß mice also develop squamous epithelial dysplasia with progression to squamous cell carcinoma (SCC) in the esophagus and the tongue. L2-IL-1ß showed age-dependent progression of squamous dysplasia to SCC with approximately 40% (n = 49) and 23.5% (n = 17) incidence rates for esophageal and tongue invasive SCC respectively, by 12-15 months of age. Interestingly, SCC development and progression in L2-IL-1ß was similar in both Germ Free (GF) and Specific Pathogen Free (SPF) conditions. Immunohistochemistry revealed a T cell predominant inflammatory profile with enhanced expression of Ki67, Sox2 and the DNA double-strand break marker, γ-H2AX, in the dysplastic squamous epithelia of L2-IL-1ß mice. Pro-inflammatory cytokines, immunomodulatory players, chemoattractants for inflammatory cells (T cells, neutrophils, eosinophils, and macrophages) and oxidative damage marker, iNOS, were significantly increased in the esophageal and tongue tissues of L2-IL-1ß mice. Our recent findings have expanded the translational utility of the IL-1ß mouse model to aid in further characterization of the key pathways of inflammation driven BE and EAC as well as ESCC and Oral SCC.


Subject(s)
Adenocarcinoma , Barrett Esophagus , Carcinoma, Squamous Cell , Esophageal Neoplasms , Esophageal Squamous Cell Carcinoma , Head and Neck Neoplasms , Mouth Neoplasms , Animals , Child, Preschool , Humans , Mice , Adenocarcinoma/pathology , Barrett Esophagus/pathology , Carcinoma, Squamous Cell/genetics , Carcinoma, Squamous Cell/complications , Esophageal Neoplasms/pathology , Esophageal Squamous Cell Carcinoma/genetics , Head and Neck Neoplasms/complications , Inflammation/genetics , Inflammation/complications , Metaplasia , Mice, Transgenic , Mouth Neoplasms/genetics , Mouth Neoplasms/complications , Squamous Cell Carcinoma of Head and Neck/complications
4.
PLoS One ; 18(3): e0282454, 2023.
Article in English | MEDLINE | ID: mdl-36867599

ABSTRACT

This study involves the in-vitro and in-vivo anti-TB potency and in-vivo safety of Transitmycin (TR) (PubChem CID:90659753)- identified to be a novel secondary metabolite derived from Streptomyces sp (R2). TR was tested in-vitro against drug resistant TB clinical isolates (n = 49). 94% of DR-TB strains (n = 49) were inhibited by TR at 10µg ml-1. In-vivo safety and efficacy studies showed that 0.005mg kg-1 of TR is toxic to mice, rats and guinea pigs, while 0.001mg kg-1 is safe, infection load did not reduce. TR is a potent DNA intercalator and also targets RecA and methionine aminopeptidases of Mycobacterium. Analogue 47 of TR was designed using in-silico based molecule detoxification approaches and SAR analysis. The multiple targeting nature of the TR brightens the chances of the analogues of TR to be a potent TB therapeutic molecule even though the parental compound is toxic. Analog 47 of TR is proposed to have non-DNA intercalating property and lesser in-vivo toxicity with high functional potency. This study attempts to develop a novel anti-TB molecule from microbial sources. Though the parental compound is toxic, its analogs are designed to be safe through in-silico approaches. However, further laboratory validations on this claim need to be carried out before labelling it as a promising anti-TB molecule.


Subject(s)
Mycobacterium tuberculosis , Streptomyces , Animals , Guinea Pigs , Mice , Rats , Intercalating Agents , Laboratories , Product Labeling , Research Design
5.
Natl J Maxillofac Surg ; 13(3): 491-494, 2022.
Article in English | MEDLINE | ID: mdl-36683926

ABSTRACT

Management of condylar fractures includes the closed and open methods. The closed method, although is conservative, has disadvantages such as inadequate reduction, disturbances in occlusion, and a decrease in ramal height. To overcome these disadvantages, surgeons prefer open reduction and internal fixation. One of the methods used is extracorpeal fixation of condyle fractures. This method has a limiting factor of excessive condylar resorption and avascular necrosis. We report a two-year follow-up of a patient with condylar head resorption and fractured implant.

6.
Sci Rep ; 11(1): 342, 2021 01 11.
Article in English | MEDLINE | ID: mdl-33431920

ABSTRACT

Establishing robust genome engineering methods in the malarial parasite, Plasmodium falciparum, has the potential to substantially improve the efficiency with which we gain understanding of this pathogen's biology to propel treatment and elimination efforts. Methods for manipulating gene expression and engineering the P. falciparum genome have been validated. However, a significant barrier to fully leveraging these advances is the difficulty associated with assembling the extremely high AT content DNA constructs required for modifying the P. falciparum genome. These are frequently unstable in commonly-used circular plasmids. We address this bottleneck by devising a DNA assembly framework leveraging the improved reliability with which large AT-rich regions can be efficiently manipulated in linear plasmids. This framework integrates several key functional genetics outcomes via CRISPR/Cas9 and other methods from a common, validated framework. Overall, this molecular toolkit enables P. falciparum genetics broadly and facilitates deeper interrogation of parasite genes involved in diverse biological processes.


Subject(s)
Genetic Engineering , Genome, Protozoan/genetics , Plasmodium falciparum/genetics , Transcriptome
7.
RSC Adv ; 11(33): 20006-20035, 2021 Jun 03.
Article in English | MEDLINE | ID: mdl-35479882

ABSTRACT

The unprecedented coronavirus disease 2019 (COVID-19) is triggered by a novel strain of coronavirus namely, Severe Acute Respiratory Syndrome-Coronavirus-2 (SARS-CoV-2). Researchers are working around the clock to control this pandemic and consequent waves of viral reproduction, through repurposing existing drugs as well as designing new vaccines. Several countries have hastened vaccine design and clinical trials to quickly address this outbreak. Currently, more than 250 aspirants against SARS-CoV-2 are in progress, including mRNA-replicating or non-replicating viral vectored-, DNA-, autologous dendritic cell-based-, and inactivated virus-vaccines. Vaccines work by prompting effector mechanisms such as cells/molecules, which target quickly replicating pathogens and neutralize their toxic constituents. Vaccine-stimulated immune effectors include adjuvant, affinity, avidity, affinity maturation, antibodies, antigen-presenting cells, B lymphocytes, carrier protein, CD4+ T-helper cells. In this review, we describe updated information on the various vaccines available over the last two decades, along with recent progress in the ongoing battle developing 63 diverse vaccines against SARS-CoV-2. The inspiration of our effort is to convey the current investigation focus on registered clinical trials (as of January 08, 2021) that satisfy the safety and efficacy criteria of international wide vaccine development.

8.
PLoS Pathog ; 16(2): e1008363, 2020 02.
Article in English | MEDLINE | ID: mdl-32069335

ABSTRACT

Malaria parasites activate a broad-selectivity ion channel on their host erythrocyte membrane to obtain essential nutrients from the bloodstream. This conserved channel, known as the plasmodial surface anion channel (PSAC), has been linked to parasite clag3 genes in P. falciparum, but epigenetic switching between the two copies of this gene hinders clear understanding of how the encoded protein determines PSAC activity. Here, we used linkage analysis in a P. falciparum cross where one parent carries a single clag3 gene to overcome the effects of switching and confirm a primary role of the clag3 product with high confidence. Despite Mendelian inheritance, CLAG3 conditional knockdown revealed remarkably preserved nutrient and solute uptake. Even more surprisingly, transport remained sensitive to a CLAG3 isoform-specific inhibitor despite quantitative knockdown, indicating that low doses of the CLAG3 transgene are sufficient to confer block. We then produced a complete CLAG3 knockout line and found it exhibits an incomplete loss of transport activity, in contrast to rhoph2 and rhoph3, two PSAC-associated genes that cannot be disrupted because nutrient uptake is abolished in their absence. Although the CLAG3 knockout did not incur a fitness cost under standard nutrient-rich culture conditions, this parasite could not be propagated in a modified medium that more closely resembles human plasma. These studies implicate oligomerization of CLAG paralogs encoded by various chromosomes in channel formation. They also reveal that CLAG3 is dispensable under standard in vitro conditions but required for propagation under physiological conditions.


Subject(s)
Cell Adhesion Molecules/genetics , Cell Adhesion Molecules/metabolism , Ion Channels/genetics , Protozoan Proteins/genetics , Protozoan Proteins/metabolism , Biological Transport , Crosses, Genetic , Erythrocytes/metabolism , Ion Channels/metabolism , Malaria, Falciparum/metabolism , Nutrients/metabolism , Nutrition Assessment , Phenotype , Plasmodium falciparum/genetics , Plasmodium falciparum/metabolism
9.
PLoS One ; 14(4): e0214023, 2019.
Article in English | MEDLINE | ID: mdl-30964863

ABSTRACT

The battle against malaria has been substantially impeded by the recurrence of drug resistance in Plasmodium falciparum, the deadliest human malaria parasite. To counter the problem, novel antimalarial drugs are urgently needed, especially those that target unique pathways of the parasite, since they are less likely to have side effects. The mitochondrial type II NADH dehydrogenase (NDH2) of P. falciparum, PfNDH2 (PF3D7_0915000), has been considered a good prospective antimalarial drug target for over a decade, since malaria parasites lack the conventional multi-subunit NADH dehydrogenase, or Complex I, present in the mammalian mitochondrial electron transport chain (mtETC). Instead, Plasmodium parasites contain a single subunit NDH2, which lacks proton pumping activity and is absent in humans. A significant amount of effort has been expended to develop PfNDH2 specific inhibitors, yet the essentiality of PfNDH2 has not been convincingly verified. Herein, we knocked out PfNDH2 in P. falciparum via a CRISPR/Cas9 mediated approach. Deletion of PfNDH2 does not alter the parasite's susceptibility to multiple mtETC inhibitors, including atovaquone and ELQ-300. We also show that the antimalarial activity of the fungal NDH2 inhibitor HDQ and its new derivative CK-2-68 is due to inhibition of the parasite cytochrome bc1 complex rather than PfNDH2. These compounds directly inhibit the ubiquinol-cytochrome c reductase activity of the malarial bc1 complex. Our results suggest that PfNDH2 is not likely a good antimalarial drug target.


Subject(s)
Antimalarials/pharmacology , Drug Resistance/genetics , NADH Dehydrogenase/genetics , Plasmodium falciparum/enzymology , Protozoan Proteins/metabolism , Animals , Antimalarials/therapeutic use , CRISPR-Cas Systems , Cells, Cultured , Electron Transport Complex I/antagonists & inhibitors , Electron Transport Complex III/antagonists & inhibitors , Erythrocytes/parasitology , Gene Knockout Techniques , Humans , Malaria, Falciparum/blood , Malaria, Falciparum/drug therapy , Malaria, Falciparum/parasitology , Mitochondria/drug effects , Mitochondria/enzymology , NADH Dehydrogenase/metabolism , Plasmodium falciparum/drug effects , Plasmodium falciparum/genetics , Protozoan Proteins/genetics , Quinolones/pharmacology , Quinolones/therapeutic use
10.
Elife ; 82019 03 19.
Article in English | MEDLINE | ID: mdl-30888318

ABSTRACT

Plasmodium parasites possess a protein with homology to Niemann-Pick Type C1 proteins (Niemann-Pick Type C1-Related protein, NCR1). We isolated parasites with resistance-conferring mutations in Plasmodium falciparum NCR1 (PfNCR1) during selections with three diverse small-molecule antimalarial compounds and show that the mutations are causative for compound resistance. PfNCR1 protein knockdown results in severely attenuated growth and confers hypersensitivity to the compounds. Compound treatment or protein knockdown leads to increased sensitivity of the parasite plasma membrane (PPM) to the amphipathic glycoside saponin and engenders digestive vacuoles (DVs) that are small and malformed. Immuno-electron microscopy and split-GFP experiments localize PfNCR1 to the PPM. Our experiments show that PfNCR1 activity is critically important for the composition of the PPM and is required for DV biogenesis, suggesting PfNCR1 as a novel antimalarial drug target. Editorial note: This article has been through an editorial process in which the authors decide how to respond to the issues raised during peer review. The Reviewing Editor's assessment is that all the issues have been addressed (see decision letter).


Subject(s)
Cell Membrane/metabolism , Niemann-Pick C1 Protein/metabolism , Plasmodium falciparum/enzymology , Plasmodium falciparum/growth & development , Protozoan Proteins/metabolism , Gene Knockdown Techniques , Homeostasis , Niemann-Pick C1 Protein/genetics , Protozoan Proteins/genetics
11.
mBio ; 9(1)2018 01 02.
Article in English | MEDLINE | ID: mdl-29295911

ABSTRACT

Plasmodium parasites and related pathogens contain an essential nonphotosynthetic plastid organelle, the apicoplast, derived from secondary endosymbiosis. Intriguingly, a highly conserved eukaryotic protein, autophagy-related protein 8 (ATG8), has an autophagy-independent function in the apicoplast. Little is known about the novel apicoplast function of ATG8 and its importance in blood-stage Plasmodium falciparum Using a P. falciparum strain in which ATG8 expression was conditionally regulated, we showed that P. falciparum ATG8 (PfATG8) is essential for parasite replication. Significantly, growth inhibition caused by the loss of PfATG8 was reversed by addition of isopentenyl pyrophosphate (IPP), which was previously shown to rescue apicoplast defects in P. falciparum Parasites deficient in PfATG8, but whose growth was rescued by IPP, had lost their apicoplast. We designed a suite of functional assays, including a new fluorescence in situ hybridization (FISH) method for detection of the low-copy-number apicoplast genome, to interrogate specific steps in apicoplast biogenesis and detect apicoplast defects which preceded the block in parasite replication. Though protein import and membrane expansion of the apicoplast were unaffected, the apicoplast was not inherited by daughter parasites. Our findings demonstrate that, though multiple autophagy-dependent and independent functions have been proposed for PfATG8, only its role in apicoplast biogenesis is essential in blood-stage parasites. We propose that PfATG8 is required for fission or segregation of the apicoplast during parasite replication.IMPORTANCEPlasmodium parasites, which cause malaria, and related apicomplexan parasites are important human and veterinary pathogens. They are evolutionarily distant from traditional model organisms and possess a unique plastid organelle, the apicoplast, acquired by an unusual eukaryote-eukaryote endosymbiosis which established novel protein/lipid import and organelle inheritance pathways in the parasite cell. Though the apicoplast is essential for parasite survival in all stages of its life cycle, little is known about these novel biogenesis pathways. We show that malaria parasites have adapted a highly conserved protein required for macroautophagy in yeast and mammals to function specifically in apicoplast inheritance. Our finding elucidates a novel mechanism of organelle biogenesis, essential for pathogenesis, in this divergent branch of pathogenic eukaryotes.


Subject(s)
Apicoplasts/metabolism , Autophagy-Related Protein 8 Family/metabolism , Organelle Biogenesis , Plasmodium falciparum/physiology , Protozoan Proteins/metabolism , Autophagy-Related Protein 8 Family/genetics , Erythrocytes/parasitology , Gene Deletion , Hemiterpenes/metabolism , Humans , Organophosphorus Compounds/metabolism , Plasmodium falciparum/genetics , Plasmodium falciparum/growth & development , Protozoan Proteins/genetics
12.
Elife ; 62017 08 18.
Article in English | MEDLINE | ID: mdl-28826494

ABSTRACT

The malaria parasite Plasmodium falciparum and related apicomplexan pathogens contain an essential plastid organelle, the apicoplast, which is a key anti-parasitic target. Derived from secondary endosymbiosis, the apicoplast depends on novel, but largely cryptic, mechanisms for protein/lipid import and organelle inheritance during parasite replication. These critical biogenesis pathways present untapped opportunities to discover new parasite-specific drug targets. We used an innovative screen to identify actinonin as having a novel mechanism-of-action inhibiting apicoplast biogenesis. Resistant mutation, chemical-genetic interaction, and biochemical inhibition demonstrate that the unexpected target of actinonin in P. falciparum and Toxoplasma gondii is FtsH1, a homolog of a bacterial membrane AAA+ metalloprotease. PfFtsH1 is the first novel factor required for apicoplast biogenesis identified in a phenotypic screen. Our findings demonstrate that FtsH1 is a novel and, importantly, druggable antimalarial target. Development of FtsH1 inhibitors will have significant advantages with improved drug kinetics and multistage efficacy against multiple human parasites.


Subject(s)
Antimalarials/pharmacology , Apicoplasts/drug effects , Membrane Proteins/genetics , Metalloproteases/genetics , Plasmodium falciparum/drug effects , Small Molecule Libraries/pharmacology , Toxoplasma/drug effects , Anti-Bacterial Agents/pharmacology , Apicoplasts/metabolism , Apicoplasts/ultrastructure , Drug Repositioning , Drug Resistance , Erythrocytes/parasitology , Fibroblasts/parasitology , Gene Expression , Gene Knockdown Techniques , High-Throughput Screening Assays , Humans , Hydroxamic Acids/pharmacology , Membrane Proteins/antagonists & inhibitors , Membrane Proteins/deficiency , Metalloproteases/antagonists & inhibitors , Metalloproteases/deficiency , Mutation , Parasitic Sensitivity Tests , Plasmodium falciparum/genetics , Plasmodium falciparum/growth & development , Plasmodium falciparum/metabolism , Protein Isoforms/antagonists & inhibitors , Protein Isoforms/deficiency , Protein Isoforms/genetics , Toxoplasma/genetics , Toxoplasma/growth & development , Toxoplasma/metabolism
13.
Proc Natl Acad Sci U S A ; 114(11): E2068-E2076, 2017 03 14.
Article in English | MEDLINE | ID: mdl-28242687

ABSTRACT

Heme is ubiquitous, yet relatively little is known about the maintenance of labile pools of this cofactor, which likely ensures its timely bioavailability for proper cellular function. Quantitative analysis of labile heme is of fundamental importance to understanding how nature preserves access to the diverse chemistry heme enables, while minimizing cellular damage caused by its redox activity. Here, we have developed and characterized a protein-based sensor that undergoes fluorescence quenching upon heme binding. By genetically encoding this sensor in the human malarial parasite, Plasmodium falciparum, we have quantified cytosolic labile heme levels in intact, blood-stage parasites. Our findings indicate that a labile heme pool (∼1.6 µM) is stably maintained throughout parasite development within red blood cells, even during a period coincident with extensive hemoglobin degradation by the parasite. We also find that the heme-binding antimalarial drug chloroquine specifically increases labile cytosolic heme, indicative of dysregulation of this homeostatic pool that may be a relevant component of the antimalarial activity of this compound class. We propose that use of this technology under various environmental perturbations in P. falciparum can yield quantitative insights into fundamental heme biology.


Subject(s)
Biosensing Techniques , Heme/metabolism , Plasmodium/metabolism , Animals , Biosensing Techniques/instrumentation , Biosensing Techniques/methods , Gene Expression , Genes, Reporter , Heme/chemistry , Heme/genetics , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Microscopy, Fluorescence , Plasmodium/genetics , Plasmodium falciparum/genetics , Plasmodium falciparum/metabolism , Protein Binding , Protein Interaction Domains and Motifs , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism
14.
Cell Microbiol ; 19(6)2017 06.
Article in English | MEDLINE | ID: mdl-28067475

ABSTRACT

The malaria parasite exports numerous proteins into its host red blood cell (RBC). The trafficking of these exported effectors is complex. Proteins are first routed through the secretory system, into the parasitophorous vacuole (PV), a membranous compartment enclosing the parasite. Proteins are then translocated across the PV membrane in a process requiring ATP and unfolding. Once in the RBC compartment the exported proteins are then refolded and further trafficked to their final localizations. Chaperones are important in the unfolding and refolding processes. Recently, it was suggested that the parasite TRiC chaperonin complex is exported, and that it is involved in trafficking of exported effectors. Using a parasite-specific antibody and epitope-tagged transgenic parasites we could observe no export of Plasmodium TRiC into the RBC. We tested the importance of the parasite TRiC by creating a regulatable knockdown line of the TRiC-θ subunit. Loss of the parasite TRiC-θ led to a severe growth defect in asexual development, but did not alter protein export into the RBC. These observations indicate that the TRiC proteins play a critical role in parasite biology, though their function, within the parasite, appears unrelated to protein trafficking in the RBC compartment.


Subject(s)
Chaperonins/metabolism , Cytosol/metabolism , Malaria, Falciparum/pathology , Multiprotein Complexes/metabolism , Plasmodium falciparum/pathogenicity , Cell Membrane/metabolism , Erythrocytes/parasitology , Gene Expression Regulation/genetics , Humans , Malaria, Falciparum/parasitology , Plasmodium falciparum/genetics , Plasmodium falciparum/metabolism , Protein Refolding , Protein Transport/physiology , Vacuoles/parasitology
15.
Natl J Maxillofac Surg ; 8(2): 170-171, 2017.
Article in English | MEDLINE | ID: mdl-29386824

ABSTRACT

Internal fixation is the routinely performed surgical procedure in craniomaxillofacial surgery. At present, available kit for internal fixation includes large number of armamentarium. To overcome and reduce this, we have modified orthopedic wire twister for fixing and removing screws. This single device can replace self-holding screwdrivers with different sizes.

16.
Cell ; 166(6): 1423-1435.e12, 2016 Sep 08.
Article in English | MEDLINE | ID: mdl-27594426

ABSTRACT

Apicomplexan parasites are leading causes of human and livestock diseases such as malaria and toxoplasmosis, yet most of their genes remain uncharacterized. Here, we present the first genome-wide genetic screen of an apicomplexan. We adapted CRISPR/Cas9 to assess the contribution of each gene from the parasite Toxoplasma gondii during infection of human fibroblasts. Our analysis defines ∼200 previously uncharacterized, fitness-conferring genes unique to the phylum, from which 16 were investigated, revealing essential functions during infection of human cells. Secondary screens identify as an invasion factor the claudin-like apicomplexan microneme protein (CLAMP), which resembles mammalian tight-junction proteins and localizes to secretory organelles, making it critical to the initiation of infection. CLAMP is present throughout sequenced apicomplexan genomes and is essential during the asexual stages of the malaria parasite Plasmodium falciparum. These results provide broad-based functional information on T. gondii genes and will facilitate future approaches to expand the horizon of antiparasitic interventions.


Subject(s)
Apicomplexa/genetics , Clustered Regularly Interspaced Short Palindromic Repeats , Genome-Wide Association Study , Host-Parasite Interactions , Protozoan Proteins/genetics , Protozoan Proteins/metabolism , Toxoplasma/genetics , Cells, Cultured , Claudins/genetics , Claudins/metabolism , Fibroblasts/parasitology , Genome, Protozoan/genetics , Humans , Malaria, Falciparum/parasitology , Malaria, Falciparum/physiopathology , Plasmodium falciparum/genetics , Toxoplasmosis/parasitology , Toxoplasmosis/physiopathology
17.
Nat Commun ; 7: 10727, 2016 Mar 01.
Article in English | MEDLINE | ID: mdl-26925876

ABSTRACT

Synthetic posttranscriptional regulation of gene expression is important for understanding fundamental biology and programming new cellular processes in synthetic biology. Previous strategies for regulating translation in eukaryotes have focused on disrupting individual steps in translation, including initiation and mRNA cleavage. In emphasizing modularity and cross-organism functionality, these systems are designed to operate orthogonally to native control mechanisms. Here we introduce a broadly applicable strategy for robustly controlling protein translation by integrating synthetic translational control via a small-molecule-regulated RNA-protein module with native mechanisms that simultaneously regulate multiple facets of cellular RNA fate. We demonstrate that this strategy reduces 'leakiness' to improve overall expression dynamic range, and can be implemented without sacrificing modularity and cross-organism functionality. We illustrate this in Saccharomyces cerevisae and the non-model human malarial parasite, Plasmodium falciparum. Given the limited functional genetics toolkit available for P. falciparum, we establish the utility of this strategy for defining essential genes.


Subject(s)
Gene Expression Regulation/physiology , Plasmodium falciparum/metabolism , Cloning, Molecular , Plasmodium falciparum/genetics , RNA Processing, Post-Transcriptional , Recombinant Proteins , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism
18.
Cell Rep ; 11(1): 164-74, 2015 Apr 07.
Article in English | MEDLINE | ID: mdl-25843709

ABSTRACT

New antimalarial drugs are urgently needed to control drug-resistant forms of the malaria parasite Plasmodium falciparum. Mitochondrial electron transport is the target of both existing and new antimalarials. Herein, we describe 11 genetic knockout (KO) lines that delete six of the eight mitochondrial tricarboxylic acid (TCA) cycle enzymes. Although all TCA KOs grew normally in asexual blood stages, these metabolic deficiencies halted life-cycle progression in later stages. Specifically, aconitase KO parasites arrested as late gametocytes, whereas α-ketoglutarate-dehydrogenase-deficient parasites failed to develop oocysts in the mosquitoes. Mass spectrometry analysis of (13)C-isotope-labeled TCA mutant parasites showed that P. falciparum has significant flexibility in TCA metabolism. This flexibility manifested itself through changes in pathway fluxes and through altered exchange of substrates between cytosolic and mitochondrial pools. Our findings suggest that mitochondrial metabolic plasticity is essential for parasite development.


Subject(s)
Enzymes/genetics , Malaria, Falciparum/genetics , Mitochondria/metabolism , Plasmodium falciparum/genetics , Tricarboxylic Acids/metabolism , Animals , Antimalarials/chemistry , Antimalarials/isolation & purification , Antimalarials/metabolism , Citric Acid Cycle/genetics , Enzymes/metabolism , Erythrocytes/metabolism , Gene Knockout Techniques , Humans , Life Cycle Stages , Malaria, Falciparum/drug therapy , Malaria, Falciparum/enzymology , Malaria, Falciparum/parasitology , Mitochondria/pathology , Plasmodium falciparum/enzymology , Plasmodium falciparum/growth & development , Plasmodium falciparum/pathogenicity
19.
Malar J ; 12: 373, 2013 Oct 26.
Article in English | MEDLINE | ID: mdl-24160265

ABSTRACT

BACKGROUND: The construction of plasmid vectors for transgene expression in the malaria parasite, Plasmodium falciparum, presents major technical hurdles. Traditional molecular cloning by restriction and ligation often yields deletions and re-arrangements when assembling low-complexity (A + T)-rich parasite DNA. Furthermore, the use of large 5'- and 3'- untranslated regions of DNA sequence (UTRs) to drive transgene transcription limits the number of expression cassettes that can be incorporated into plasmid vectors. METHODS: To address these challenges, two high fidelity cloning strategies, namely yeast homologous recombination and the Gibson assembly method, were evaluated for constructing P. falciparum vectors. Additionally, some general rules for reliably using the viral 2A-like peptide to express multiple proteins from a single expression cassette while preserving their proper trafficking to various subcellular compartments were assessed. RESULTS: Yeast homologous recombination and Gibson assembly were found to be effective strategies for successfully constructing P. falciparum plasmid vectors. Using these cloning methods, a validated family of expression vectors that provide a flexible starting point for user-specific applications was created. These vectors are also compatible with traditional cloning by restriction and ligation, and contain useful combinations of commonly used features for enhancing plasmid segregation and site-specific integration in P. falciparum. Additionally, application of a 2A-like peptide for the synthesis of multiple proteins from a single expression cassette, and some rules for combinatorially directing proteins to discrete subcellular compartments were established. CONCLUSIONS: A set of freely available, sequence-verified and functionally validated parts that offer greater flexibility for constructing P. falciparum vectors having expanded expression capacity is provided.


Subject(s)
Gene Expression , Genetic Vectors , Genetics, Microbial/methods , Molecular Biology/methods , Plasmodium falciparum/genetics , Transgenes , Plasmids
20.
J Nat Sci Biol Med ; 4(1): 245-9, 2013 Jan.
Article in English | MEDLINE | ID: mdl-23633875

ABSTRACT

Cleidocranial dysplasia is an inherited skeletal anomaly that affects primarily the skull, clavicle, and dentition, which can occur spontaneously, but most are inherited in autosomal dominant mode. The skull findings are brachycephaly, delayed or failed closure of the fontanelles, presence of open skull sutures and multiple wormian bones with pronounced frontal bossing. The syndrome is notable for aplasia or hypoplasia of the clavicles. The neck appears long and narrow and the shoulders markedly droop. Oral manifestations exhibit a hypoplastic maxilla with high-arched palate. Crowding of teeth is produced by retention of deciduous teeth, delayed eruption of permanent teeth, and the presence of a large number of unerupted supernumerary teeth. We report a case of CCD in a 12-year-old girl who presented with an unaesthetic facial appearance, unerupted permanent dentition with hearing loss.

SELECTION OF CITATIONS
SEARCH DETAIL
...