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1.
ACS Omega ; 7(19): 16689-16704, 2022 May 17.
Article in English | MEDLINE | ID: mdl-35601332

ABSTRACT

UV-vis electronic absorption spectroscopy was used to investigate the new molecular charge transfer complex (CTC) interaction between electron donor O-phenylenediamine (OPD) and electron acceptor 2,3-dichloro-5,6-dicyano-p-benzoquinone (DDQ). The CTC solution state analysis was carried out by two different polarities. The stoichiometry of the prepared CTC was determined by using Job's, photometric, and conductometric titration methods and was detemined to be 1:1 in both solvents (at 298 K). The formation constant and molar extinction coefficient were determined by applying the modified (1:1) Benesi-Hildebrand equation. The thermodynamic parameter ΔG° result indicated that the charge transfer reaction was spontaneous.The stability of the synthesized CTC was evaluated by using different spectroscopic parameters like the energy, ionization potential, oscillator strength, resonance energy, dissociation energy, and transition dipole moment. The synthesized solid CTC was characterized by using different analytical methods, including elemental analysis, Fourier transform infrared, nuclear magnetic resonance, TGA-DTA, and powder X-ray diffraction. The biological evolution of the charge transfer (CT) complex was studied by using DNA binding and antibacterial analysis. The CT complex binding with calf thymus DNA through an intercalative mode was observed from UV-vis spectral study. The CT complex produced a good binding constant value (6.0 × 105 L.mol-1). The antibacterial activity of the CT complex shows notable activity compared to the standard drug, tetracycline. These results reveal that the CT complex may in future be used as a bioactive drug. The hypothetical DFT estimations of the CT complex supported the experimental studies.

2.
ACS Omega ; 7(1): 810-822, 2022 Jan 11.
Article in English | MEDLINE | ID: mdl-35036748

ABSTRACT

A combined experimental and theoretical study of the electron donor 4-dimethylaminopyridine (4-DMAP) with the electron acceptor 2, 3-dichloro-5, 6-dicyano-p-benzoquinone (DDQ) has been made in acetonitrile (ACN) and methanol (MeOH) media at room temperature. The stoichiometry proportion of the charge transfer (CT) complex was determined using Job's and photometric titration methods and found to be 1:1. The association constant (K CT), molar absorptivity (ε), and spectroscopic physical parameters were used to know the stability of the CT complex. The CT complex shows maximum stability in a high-polar solvent (ACN) compared to a less-polar solvent (MeOH). The prepared complex was characterized by Fourier transform infrared, NMR, powder X-ray diffraction, and scanning electron microscopy-energy-dispersive X-ray analysis. The nature of DNA binding ability of the complex was probed using UV-visible spectroscopy, and the binding mode of the CT complex is intercalative. The intrinsic binding constant (K b) value is 1.8 × 106 M-1. It reveals a primary indication for developing a pharmaceutical drug in the future due to its high binding affinity with the CT complex. The theoretical study was carried out by density functional theory (DFT), and the basis set is wB97XD/6-31G(d,p), with gas-phase and PCM analysis, which supports experimental results. Natural atomic charges, state dipole moments, electron density difference maps, reactivity parameters, and FMO surfaces were also evaluated. The MEP maps indicate the electrophilic nature of DDQ and the nucleophilic nature of 4-DMAP. The electronic spectrum computed using time-dependent DFT (TD-DFT) via a polarizable continuum salvation approach, PCM/TD-DFT, along with natural transition orbital analysis is fully correlated with the experimental outcomes.

3.
J Recept Signal Transduct Res ; 39(4): 312-320, 2019 Aug.
Article in English | MEDLINE | ID: mdl-31658859

ABSTRACT

Isoniazid, also known as isonicotinyl hydrazide (INH), was used as a frontline drug to treat Mycobacterium tuberculosis. The in silico virtual screening is used to identify the effective inhibitor for CYP 121 of M. tuberculosis. Nearly, 10,000 triazole compounds from various databases have been virtually screened against CYP121 by using the module Glide. A total of 15 molecules with a better docking score compared to marketed drugs and cocrystal ligand were chosen for the MM/GBSA study to recheck the binding affinity. A total of five hit molecules which show significant binding-free energies were chosen for QikProp studies. The triazole molecules which contain 3-benzaimidine moiety interact with a heme cofactor and active site residues of CYP121. These protein-ligand complexes were taken to calculate the potential binding region of the ligand in the receptor using the solvent accessible surface area (SASA). The amino residues Phe168, Val228, Gln385, Trp182, Asp185, Val83, and heme 401 cofactor of the target protein are the important binding residues with the ligands. The in silico ADME studies for the ligand dataset are calculated to determine the druggability of the molecules.


Subject(s)
Anti-Bacterial Agents/pharmacology , Cytochrome P-450 Enzyme System/chemistry , Cytochrome P-450 Enzyme System/metabolism , High-Throughput Screening Assays/methods , Mycobacterium tuberculosis/drug effects , Triazoles/pharmacology , Anti-Bacterial Agents/chemistry , Catalytic Domain , Ligands , Molecular Docking Simulation , Molecular Dynamics Simulation , Molecular Structure , Mycobacterium tuberculosis/growth & development , Mycobacterium tuberculosis/metabolism , Protein Binding , Protein Conformation , Triazoles/chemistry
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