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1.
Annu Int Conf IEEE Eng Med Biol Soc ; 2016: 211-214, 2016 Aug.
Article in English | MEDLINE | ID: mdl-28268314

ABSTRACT

Rate responsive pacemakers (PM) use different strategies to adapt the patient paced rate, with the aim of having the best hemodynamic performance in response to internal or external conditions. Closed-loop stimulation (CLS) uses intracardiac impedance as a sensor principle. The evaluation of impact of different pacing modalities and technologies on the blood pressure (BP) profiles is mainly investigated in short-term laboratory settings, mainly due to the need of reliable daily-based BP values. The impact of CLS pacing on systemic blood pressure (BP) has been studied on short term basis, but data on long term effects are scarse. This study present a telemedicine platform designed for evaluating the effect of the rate responsive technology on daily systolic and diastolic BP data. BP and pacemaker data were collected daily from fourteen patients during a 3 month period. The total number of monitoring days was 1277 (91 day/patient), for a total number of 4455 BP measures. On average 3.5 measure/day/patient were received). The analysis of the BP data showed that CLS pacing results in diastolic pressure closer to the normal values than accelerometer-based pacing, which were associated to lower diastolic pressures.


Subject(s)
Blood Pressure Determination/methods , Blood Pressure/physiology , Monitoring, Physiologic/methods , Pacemaker, Artificial , Telemetry/methods , Adult , Aged , Female , Heart Rate/physiology , Humans , Male , Systole/physiology
2.
Pacing Clin Electrophysiol ; 24(12): 1732-8, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11817806

ABSTRACT

The "EGM width criterion" is a discrimination algorithm that was available in the last generation ICDs. It improved ventricular tachycardia detection by withholding inappropriate therapy deliveries in the presence of narrow QRS tachycardias. The accuracy of the algorithm depends on the optimal settings of the intracardiac EGM source, the "slew thresholds," and the "width threshold." The possible dependence of these parameters on body position may affect the detection efficacy. Whether these effects can be minimized by a proper choice of the electrode configuration used for signal analysis is still to be investigated. This study aimed to evaluate the stability of the slew threshold and width threshold obtained in the supine and orthostatic positions detected by the tip-to-ventricular coil and can-to-ventricular coil electrode configurations. Their time dependence was also evaluated at the 6-month follow-up. Fifty-eight patients who were recipients of an ICD (model Medtronic 7223cx and 7227cx) were included in the study. Changing from supine to orthostatic position caused a marked variation of slew and width thresholds (21.0 +/- 13.9 V/s and 10.1 +/- 9.6 ms, respectively) in 36% of patients with tip-to-ventricular coil and in 44% of patients with can-to-defibrillating coil (the mean slew threshold variation was in this case 17.6 +/- 15.8 V/s, while the mean width threshold variation was 18.8 +/- 21.0 ms). Width threshold variation was statistically significant (P < 0.02) with the latter electrode configuration. Slew thresholds settings changed between the 1- and 6-month follow-ups in the 75% of patients with can-to-defibrillating coil configuration and in 50% with tip-to-defibrillating coil. These time related variations were significantly larger with the tip-to-defibrillating coil configuration (P < 0.01). In conclusion, EGM width parameters may change between supine and orthostatic position and over time with tip-to-defibrillating coil configuration and can-to-defibrillating coil configuration. The former configuration was less sensitive to body position changes, but more sensitive to time related variations. These findings may be useful for optimal programming of the EGM width criterion, but if parameter programming based on these results can improve the discrimination specificity still needs to be investigated.


Subject(s)
Defibrillators, Implantable , Posture , Aged , Algorithms , Electrocardiography , Electrodes, Implanted , Female , Humans , Male , Prospective Studies , Time Factors
3.
Protein Sci ; 8(3): 467-81, 1999 Mar.
Article in English | MEDLINE | ID: mdl-10091649

ABSTRACT

We have determined the three-dimensional solution structure of the complex of Lactobacillus casei dihydrofolate reductase and the anticancer drug trimetrexate. Two thousand seventy distance, 345 dihedral angle, and 144 hydrogen bond restraints were obtained from analysis of multidimensional NMR spectra recorded for complexes containing 15N-labeled protein. Simulated annealing calculations produced a family of 22 structures fully consistent with the constraints. Several intermolecular protein-ligand NOEs were obtained by using a novel approach monitoring temperature effects of NOE signals resulting from dynamic processes in the bound ligand. At low temperature (5 degrees C) the trimethoxy ring of bound trimetrexate is flipping sufficiently slowly to give narrow signals in slow exchange, which give good NOE cross peaks. At higher temperature these broaden and their NOE cross peaks disappear thus allowing the signals in the lower-temperature spectrum to be identified as NOEs involving ligand protons. The binding site for trimetrexate is well defined and this was compared with the binding sites in related complexes formed with methotrexate and trimethoprim. No major conformational differences were detected between the different complexes. The 2,4-diaminopyrimidine-containing moieties in the three drugs bind essentially in the same binding pocket and the remaining parts of their molecules adapt their conformations such that they can make effective van der Waals interactions with essentially the same set of hydrophobic amino acids, the side-chain orientations and local conformations of which are not greatly changed in the different complexes (similar chi1 and chi2 values).


Subject(s)
Folic Acid Antagonists/chemistry , Lacticaseibacillus casei/enzymology , Tetrahydrofolate Dehydrogenase/chemistry , Trimetrexate/chemistry , Ligands , Magnetic Resonance Spectroscopy , Molecular Structure
4.
Biochemistry ; 38(7): 2127-34, 1999 Feb 16.
Article in English | MEDLINE | ID: mdl-10026296

ABSTRACT

1H and 15N NMR studies have been undertaken on complexes of Lactobacillus casei dihydrofolate reductase (DHFR) formed with analogues of the antibacterial drug brodimoprim (2,4-diamino-5-(3', 5'-dimethoxy-4'-bromobenzyl)pyrimidine) in order to monitor interactions between carboxylate groups on the ligands and basic residues in the protein. These analogues had been designed by computer modeling with carboxylated alkyl chains introduced at the 3'-O position in order to improve their binding properties by making additional interactions with basic groups in the protein. Specific interactions between ligand carboxylate groups and the conserved Arg57 residue have been detected in studies of 1H/15N HSQC spectra of complexes of DHFR with both the 4-carboxylate and the 4, 6-dicarboxylate brodimoprim analogues. The spectra from both complexes showed four resolved signals for the four NHeta protons of the guanidino group of Arg57, and this is consistent with hindered rotation in the guanidino group resulting from interactions with the 4-carboxylate group in each analogue. In the spectra of each complex, one of the protons from each of the two NH2 groups and both nitrogens are considerably deshielded compared to the shielding values normally observed for such nuclei. This pattern of deshielding is that expected for a symmetrical end-on interaction of the carboxylate oxygens with the NHeta12 and NHeta22 guanidino protons. The differences in the degree of deshielding between the complexes of the two structurally similar brodimoprim analogues and the methotrexate indicates that the shielding is very sensitive to geometry, most probably to hydrogen bond lengths. The 1H/15N HSQC spectrum of the DHFR complex with the brodimoprim-6-carboxylate analogue does not feature any deshielded Arg NHeta protons and this argues against a similar interaction with the Arg57 in this case. It has not proved possible to determine whether the 6-carboxylate in this analogue is interacting directly with any residue in the protein. 1H/15N HSQC spectra have been fully assigned for the complexes with the three brodimoprim analogues and chemical shift mapping used to explore interactions in the binding site. The 1H signals of the bound ligands for all three brodimoprim analogues have been assigned. Their 1H chemical shifts were found to be fairly similar in the different complexes indicating that the 2, 4-diaminopyrimidine and the benzyl ring are binding in essentially the same binding sites and with the same overall conformation in the different complexes. The rotation rate about the NepsilonCzeta bond in the brodimoprim-4,6-dicarboxylate complex with DHFR has been determined from a zz-HSQC exchange experiment, and its value is quite similar to that observed in the DHFR.methotrexate complex (24 +/- 10 s-1 at 8 degrees C and 50 +/- 10 s-1 at 15 degrees C, respectively). The 1H and 15N chemical shift differences of selected amide and guanidino NH groups, measured between the DHFR complexes, provided further evidence about the interactions involving Arg57 with the 4-carboxylate and 4,6-dicarboxylate brodimoprim analogues.


Subject(s)
Arginine/chemistry , Carboxylic Acids/chemistry , Lacticaseibacillus casei/enzymology , Tetrahydrofolate Dehydrogenase/chemistry , Trimethoprim/analogs & derivatives , Crystallography, X-Ray , Enzyme Inhibitors/chemistry , Folic Acid Antagonists/chemistry , Ligands , Macromolecular Substances , Nitrogen Isotopes , Nuclear Magnetic Resonance, Biomolecular/methods , Protons , Trimethoprim/chemistry
5.
Magn Reson Imaging ; 16(4): 435-40, 1998 May.
Article in English | MEDLINE | ID: mdl-9665554

ABSTRACT

An extension of the solid-state nuclear magnetic resonance (NMR) imaging based on magic angle in the rotating frame (MARF) line narrowing approach is presented. The modified magic angle in the rotating frame imaging sequence is able to yield T1rho maps of large band polymers with remarkable contrast sensitivity and without contrast parameter alteration referable to the narrowing procedure. This last feature is examined closely in order to outline the actual effectiveness of the method. Further experimental details, especially regarding probe coil design, recently improved, are discussed and some new results are presented.


Subject(s)
Magnetic Resonance Spectroscopy , Models, Structural , Polymers/chemistry , Radio Waves , Image Processing, Computer-Assisted , Phantoms, Imaging , Polyethylenes/chemistry , Polymethyl Methacrylate/chemistry , Polyurethanes/chemistry , Reproducibility of Results , Sensitivity and Specificity
6.
J Mol Biol ; 277(1): 119-34, 1998 Mar 20.
Article in English | MEDLINE | ID: mdl-9514736

ABSTRACT

We have determined the three-dimensional solution structure of the complex of Lactobacillus casei dihydrofolate reductase (18.3 kDa, 162 amino acid residues) formed with the anticancer drug methotrexate using 2531 distance, 361 dihedral angle and 48 hydrogen bond restraints obtained from analysis of multidimensional NMR spectra. Simulated annealing calculations produced a family of 21 structures fully consistent with the constraints. The structure has four alpha-helices and eight beta-strands with two other regions, comprising residues 11 to 14 and 126 to 127, also interacting with each other in a beta-sheet manner. The methotrexate binding site is very well defined and the structure around its glutamate moiety was improved by including restraints reflecting the previously determined specific interactions between the glutamate alpha-carboxylate group with Arg57 and the gamma-carboxylate group with His28. The overall fold of the binary complex in solution is very similar to that observed in the X-ray studies of the ternary complex of L. casei dihydrofolate reductase formed with methotrexate and NADPH (the structures of the binary and ternary complexes have a root-mean-square difference over the backbone atoms of 0.97 A). Thus no major conformational change takes place when NADPH binds to the binary complex. In the binary complex, the loop comprising residues 9 to 23 which forms part of the active site has been shown to be in the "closed" conformation as defined by M. R. Sawaya & J. Kraut, who considered the corresponding loops in crystal structures of complexes of dihydrofolate reductases from several organisms. Thus the absence of the NADPH does not result in the "occluded" form of the loop as seen in crystal studies of some other dihydrofolate reductases in the absence of coenzyme. Some regions of the structure in the binary complex which form interaction sites for NADPH are less well defined than other regions. However, in general terms, the NADPH binding site appears to be essentially pre-formed in the binary complex. This may contribute to the tighter binding of coenzyme in the presence of methotrexate.


Subject(s)
Lacticaseibacillus casei/enzymology , Methotrexate/chemistry , Tetrahydrofolate Dehydrogenase/chemistry , Binding Sites , Crystallography, X-Ray , Hydrogen Bonding , Magnetic Resonance Spectroscopy , Molecular Structure , Thermodynamics
7.
FEBS Lett ; 405(1): 16-20, 1997 Mar 17.
Article in English | MEDLINE | ID: mdl-9094416

ABSTRACT

The 1H/15N HSQC NMR spectra of complexes of Lactobacillus casei dihydrofolate reductase containing methotrexate recorded at 1 degree C show four resolved signals for the four NH(eta) protons of the Arg57 residue. This is consistent with hindered rotation in the guanidino group resulting from interactions with the alpha-carboxylate of methotrexate. Increasing the temperature causes exchange line-broadening and coalescence of signals. Rotation rates for the N(epsilon)C(zeta) and C(zeta)N(eta) bonds have been calculated from lineshape analysis and from zz-HSQC exchange experiments. The interactions between the methotrexate alpha-carboxylate group and the Arg57 guanidino group decrease the rotation rates for the N(epsilon)C(zeta) bond by about a factor of 10 and those for the C(zeta)N(eta) bonds by more than a factor of 100 with respect to their values in free arginine. Furthermore, the relative rates of rotation about these two bonds are reversed in the protein complexes compared with their values in free arginine indicating that there are concerted rotations about the N(epsilon)C(zeta) bond of the Arg57 guanidino group and the C'C(alpha) bond of the glutamate alpha-carboxylate group of methotrexate.


Subject(s)
Arginine/chemistry , Methotrexate/chemistry , Tetrahydrofolate Dehydrogenase/chemistry , Arginine/metabolism , Carboxylic Acids/chemistry , Lacticaseibacillus casei/enzymology , Ligands , Methotrexate/metabolism , Molecular Structure , NADP/chemistry , NADP/metabolism , Optical Rotation , Tetrahydrofolate Dehydrogenase/metabolism
8.
J Mol Biol ; 267(2): 418-32, 1997 Mar 28.
Article in English | MEDLINE | ID: mdl-9096235

ABSTRACT

pNR-2/pS2 is a 60 residue extracellular protein, which was originally discovered in human breast cancer cells, and subsequently found in other tumours and normal gastric epithelial cells. We have determined the three-dimensional solution structure of a C58S mutant of human pNR-2/pS2 using 639 distance and 137 torsion angle constraints obtained from analysis of multidimensional NMR spectra. A series of simulated annealing calculations resulted in the unambiguous determination of the protein's disulphide bonding pattern and produced a family of 19 structures consistent with the constraints. The peptide contains a single "trefoil" sequence motif, a region of about 40 residues with a characteristic sequence pattern, which has been found, either singly or as a repeat, in about a dozen extracellular proteins. The trefoil domain contains three disulphide bonds, whose 1-5, 2-4 and 3-6 cysteine pairings form the structure into three closely packed loops with only a small amount of secondary structure, which consists of a short alpha-helix packed against a two-stranded antiparallel beta-sheet. The structure of the domain is very similar to those of the two trefoil domains that occur in porcine spasmolytic polypeptide (PSP), the only member of the trefoil family whose three-dimensional structure has been previously determined. Outside the trefoil domain, which forms the compact "head" of the molecule, the N and C-terminal strands are closely associated, forming an extended "tail", which has some beta-sheet character for part of its length and which becomes more disordered towards the termini as indicated by (15)N{(1)H} NOEs. We have considered the structural implications of the possible formation of a native C58-C58 disulphide-bonded homodimer. Comparison of the surface features of pNR-2/pS2 and PSP, and consideration of the sequences of the other human trefoil domains in the light of these structures, illuminates the possible role of specific residues in ligand/receptor binding.


Subject(s)
Neoplasm Proteins/chemistry , Protein Conformation , Proteins , Amino Acid Sequence , Binding Sites , Dimerization , Disulfides/chemistry , Humans , Magnetic Resonance Spectroscopy , Models, Molecular , Molecular Sequence Data , Protein Structure, Secondary , Sequence Alignment , Trefoil Factor-1 , Tumor Suppressor Proteins
9.
Eur J Biochem ; 238(2): 435-9, 1996 Jun 01.
Article in English | MEDLINE | ID: mdl-8681955

ABSTRACT

1H-NMR and 15N-NMR signal assignments have been made for the eight arginine residues in Lactobacillus casei dihydrofolate reductase in its binary complex with methotrexate and in its ternary complex with methotrexate and NADPH. 1H-NMR chemical shifts for the guanidino groups of two of the arginines (Arg57 and Arg43) were sensitive to different modes of binding of the guanidino groups with charged oxygen atoms of the ligands. In the complexes formed with methotrexate, Arg57 showed four non-equivalent NH eta proton signals indicating hindered rotation about the N epsilon-C zeta and C zeta-N eta bonds. The NH eta 12 and NH eta 22 protons showed large downfield shifts, which would be expected for a symmetric end-on interaction of these protons with the charged oxygen atoms of a carboxylate group in methotrexate. These effects were not observed for the complex formed with trimethoprim, which does not contain any carboxylate groups. In the complex formed with NADPH present, Arg43 showed a large downfield chemical shift for its NH epsilon proton and a retardation of its rate of exchange with water. This pattern of deshielding contrasts with that detected for Arg57 and is that expected for a side-on interaction of the guanidino group protons with charged oxygen atoms of the ribose 2'-phosphate group of NADPH.


Subject(s)
Arginine/metabolism , Lacticaseibacillus casei/enzymology , Tetrahydrofolate Dehydrogenase/chemistry , Tetrahydrofolate Dehydrogenase/metabolism , Binding Sites , Ligands , Magnetic Resonance Spectroscopy , Molecular Structure , NADP/metabolism , Protein Binding
10.
Eur J Biochem ; 221(1): 445-54, 1994 Apr 01.
Article in English | MEDLINE | ID: mdl-8168533

ABSTRACT

We have studied the structures of synthetic peptides which correspond to the proposed first and second membrane-spanning segments of the human red cell anion transporter (band 3). The peptides, which were acetylated at their N-termini and amidated at the C-termini, comprise the 20 amino acids of residues 405-424 and 21 amino acids of residues 436-456 of the human band 3 sequence. The solution structures of the peptides in trifluoroethanol were studied by two-dimensional NMR spectroscopy. Characteristic NOEs were observed indicating that the peptides adopted a predominantly alpha-helical structure in trifluoroethanol solution. Dynamical simulated annealing using the program XPLOR was employed for the structure calculations. The amide exchange rates in trifluoroethanol have also been measured and are consistent with an alpha-helical structure for the peptides.


Subject(s)
Anion Exchange Protein 1, Erythrocyte/chemistry , Erythrocyte Membrane/chemistry , Acetylation , Amino Acid Sequence , Circular Dichroism , Humans , Magnetic Resonance Spectroscopy , Molecular Sequence Data , Molecular Structure , Protein Structure, Secondary , Software , Solutions , Trifluoroethanol
11.
Carbohydr Res ; 210: 39-49, 1991 Mar 20.
Article in English | MEDLINE | ID: mdl-1878886

ABSTRACT

Vibrational Raman optical activity (R.o.a.) spectra of a range of carbohydrates in aqueous solution, measured in back-scattering between 700 and 1500 cm-1, are presented. Features were revealed that appear to be characteristic of details of the stereochemistry. Effects associated with the glycosidic linkage in di- and oligo-saccharides are prominent.


Subject(s)
Carbohydrates/chemistry , alpha-Cyclodextrins , Arabinose/chemistry , Carbohydrate Conformation , Carbohydrate Sequence , Cellobiose/chemistry , Cyclodextrins/chemistry , Glucose/analogs & derivatives , Glucose/chemistry , Maltose/chemistry , Molecular Sequence Data , Pentoses/chemistry , Spectrum Analysis, Raman , Trisaccharides/chemistry , Vibration , Xylose/chemistry
12.
Pediatr Med Chir ; 4(4): 379-86, 1982.
Article in Italian | MEDLINE | ID: mdl-6820497

ABSTRACT

In the Neonatal Pathology Center of Pontecorvo Hospital the Authors have made use of A.E.C. (continuous enteral alimentation) or transpyloric technique according Cheek, Staub and Minoli, in order to control its advantages published in literature. Eight newborn infants (six males and two females), hospitalized from may the 1st/1979 to april 30/1980, have been studied: their middle weight at the birth was ounces 66,62, the middle G.A. 32,62 weeks; five newborn infants of them were affected by R.D.S., two of them by M.I.P. and only one was affected by microcephaly with convulsive syndrome. No decease and no stressing complication happened; only in three of them (37,75%) the Authors decided to stop the feeding for 24 hours, because they had biliary vomitings. It's very necessary to feed them with human milk or, at least, with modified milk at low osmolarity; the feeding characteristics are suggested and particular cares must be taken as said in the instructions. Finally, in consideration of the good results obtained, the Authors affirme that even in the suburban hospitals the A.E.C. can be utilized recommending its use.


Subject(s)
Enteral Nutrition/methods , Infant, Newborn, Diseases/therapy , Infant, Small for Gestational Age , Body Weight , Energy Intake , Female , Humans , Infant, Newborn , Male
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