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1.
Article in English | MEDLINE | ID: mdl-37623176

ABSTRACT

Resilient stormwater infrastructure is one of the fundamental components of resilient and sustainable cities. For this, the resilience assessment of stormwater infrastructure against earthquake hazards is crucial for municipal authorities. The objective of this study is to develop a resilience assessment framework for stormwater pipe infrastructure against seismic hazards. A Bayesian belief network (BBN)-based stormwater infrastructure resilience model is constructed based on the published literature and expert knowledge. The developed framework is implemented in the city of Regina, Canada, to assess the city's stormwater pipe infrastructure resilience. The outcome of the model indicates that proposed BBN-based stormwater infrastructure resilience model can effectively quantify uncertainties and handle the nonlinear relationships between several reliability and recovery factors. The model is also capable of identifying the most sensitive and vulnerable stormwater pipes within the network.


Subject(s)
Biological Products , Bayes Theorem , Reproducibility of Results , Canada , Cities
2.
Article in English | MEDLINE | ID: mdl-33628312

ABSTRACT

Thymus (Lamiaceae) is famous for its pharmacological properties. Thymus daenensis Celak (Avishan-e-denaee in Persian) is an endemic Thymus species in Iran and is traditionally used for its digestive, carminative, antitussive, antispasmodic, and expectorant attributes in folk medicine. Ecotypic oils were extracted and analyzed with the GC-MS. Their biological properties in terms of antimicrobial, antioxidant, and antigenotoxic activities were evaluated using the minimal inhibitory concentration, minimal bactericidal concentration, and DPPH, ß-carotene, and comet assays. The GC-MS results for Thymus daenensis Celak oils revealed thymol (73.86%) and carvacrol (51.89%) as the most abundant components. Due to the results, reasonable bactericidal activity values range from 0.14 to 5.00 mg/ml, and fungicidal activity ranges from 0.17 to 0.58 mg/ml. The necessary oil free radical scavenging capacity (0.41-1.79 mg/ml), bleaching inhibitory activity (0.01-1.06 mg/ml), and genoprotective potential (1.04-7.78 mg/ml) indicated the dose-dependent activity. The results suggest that Thymus daenensis is an important antibacterial and antifungal bioresource. Additionally, the antioxidant and radical scavenging capacity suggests this species has a role as a natural preservative in oxidative diseases and in the prevention of food spoilage.

3.
Braz J Microbiol ; 45(2): 533-8, 2014.
Article in English | MEDLINE | ID: mdl-25242938

ABSTRACT

Brucella is an intracellular pathogen capable of infecting animals and humans. The aim of this study was to identify Brucella spp in sera of high risk individuals by a polymerase chain reaction (PCR)-based method. A total of 180 patients suspected to have Brucellosis were examined by serological tests. To establish a PCR protocol for diagnosis of active brucellosis, DNA was extracted from the serum samples by using a commercial kit. PCR amplification was done for detection of Brocella DNA using BCSP31 target gene and IS711 locus. The PCR assay showed that an amplicon of 223 bp was obtained in 73.8% (133/180) of the tested sera using primers (B4/B5) derived from a gene encoding the 31-kDa Brucella abortus antigen. In another PCR, an amplicon of 498 bp was obtained in 63.8% (115/180) of the samples using Brucella abortus-specific primers derived from a locus adjacent to the 3'-end of IS711, and also an amplicon of 731 bp was produced in 4.4% (8/180) of the tested samples using Brucella melitensis-specific primers. When the Wright method was used as a gold standard, the sensitivity and specificity of the PCR technique for genus identification were found to be 96 and 80.7%, respectively. However, the sensitivity value obtained with the species-specific PCR method was 82%, and specificity was similar to that previous reported. This is the first report of a high frequency of Brucella abortus in patients suspicious of Brucellosis from the Zanjan province.


Subject(s)
Brucella abortus/isolation & purification , Brucella melitensis/isolation & purification , Brucellosis/diagnosis , Molecular Diagnostic Techniques/methods , Polymerase Chain Reaction/methods , Serum/microbiology , Adolescent , Adult , Aged , Animals , Antigens, Bacterial/genetics , Bacterial Proteins/genetics , Brucella abortus/genetics , Brucella melitensis/genetics , DNA Transposable Elements , DNA, Bacterial/genetics , DNA, Bacterial/isolation & purification , Female , Humans , Iran , Male , Middle Aged , Sensitivity and Specificity , Young Adult
4.
Braz. j. microbiol ; 45(2): 533-538, Apr.-June 2014. ilus, tab
Article in English | LILACS | ID: lil-723114

ABSTRACT

Brucella is an intracellular pathogen capable of infecting animals and humans. The aim of this study was to identify Brucella spp in sera of high risk individuals by a polymerase chain reaction (PCR)-based method. A total of 180 patients suspected to have Brucellosis were examined by serological tests. To establish a PCR protocol for diagnosis of active brucellosis, DNA was extracted from the serum samples by using a commercial kit. PCR amplification was done for detection of Brocella DNA using BCSP31 target gene and IS711 locus. The PCR assay showed that an amplicon of 223 bp was obtained in 73.8% (133/180) of the tested sera using primers (B4/B5) derived from a gene encoding the 31-kDa Brucella abortus antigen. In another PCR, an amplicon of 498 bp was obtained in 63.8% (115/180) of the samples using Brucella abortus-specific primers derived from a locus adjacent to the 3'-end of IS711, and also an amplicon of 731 bp was produced in 4.4% (8/180) of the tested samples using Brucella melitensis-specific primers. When the Wright method was used as a gold standard, the sensitivity and specificity of the PCR technique for genus identification were found to be 96 and 80.7%, respectively. However, the sensitivity value obtained with the species-specific PCR method was 82%, and specificity was similar to that previous reported. This is the first report of a high frequency of Brucella abortus in patients suspicious of Brucellosis from the Zanjan province.


Subject(s)
Adolescent , Adult , Aged , Animals , Female , Humans , Male , Middle Aged , Young Adult , Brucella abortus/isolation & purification , Brucella melitensis/isolation & purification , Brucellosis/diagnosis , Molecular Diagnostic Techniques/methods , Polymerase Chain Reaction/methods , Serum/microbiology , Antigens, Bacterial/genetics , Bacterial Proteins/genetics , Brucella abortus/genetics , Brucella melitensis/genetics , DNA Transposable Elements , DNA, Bacterial/genetics , DNA, Bacterial/isolation & purification , Iran , Sensitivity and Specificity
5.
Iran Biomed J ; 17(3): 129-33, 2013.
Article in English | MEDLINE | ID: mdl-23748890

ABSTRACT

BACKGROUND: Infectious by Pseudomonas aeruginosa has spread worldwide and metallo-beta-lactamases (MBL) are being reported with increasing frequency. The aim of this study was to investigate the antibiotic susceptibility and distribution of blaVIM and blaIMP genes in P. aeruginosa isolates from Zanjan Province of Iran. METHODS: A total of 70 P. aeruginosa isolates were identified from patients admitted at intensive care units. The antimicrobial susceptibility was tested by disk diffusion (Kirby-Bauer) method and for production of MBL using double-disk synergy test (DDST). After DNA extraction, the presence of blaVIM and blaIMP genes and class 1 integron were detected by PCR. RESULTS: Most of the isolates were resistant to meropenem, cefotaxime and imipenem (IPM). Also, 44/70 (62.85%) IPM resistant isolates were confirmed by DDST. Of the 44 clinical isolates, 41 (93%) isolates showed MIC≥4 µg/ml for IPM. Based on the DDST results, 36 (87.8%) were confirmed to be MBL producers. PCR amplification showed that 23/41 (56%) carried blaVIM and 10/41 (24.3%) possessed blaIMP gene. Also, 31/44 (70.5%) isolates contained class 1 integron gene. CONCLUSION: Our results highlight that the genes for Verona integron-encoded metallo-ß-lactamase, IPM ß-lactamases and class 1 integrons were predominantly present among the IPM-resistant P. aeruginosa tested in our province and also the frequency of blaVIM type is higher than blaIMP. This is the first report of P. aeruginosa strains producing blaIMP with high frequency from Zanjan province of Iran.


Subject(s)
Hospitals, University , Pseudomonas aeruginosa/enzymology , Pseudomonas aeruginosa/isolation & purification , beta-Lactamases/metabolism , Electrophoresis, Agar Gel , Genes, Bacterial/genetics , Humans , Iran , Polymerase Chain Reaction , Pseudomonas aeruginosa/genetics , beta-Lactamases/genetics
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