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1.
Mol Cell ; 60(5): 808-815, 2015 Dec 03.
Article in English | MEDLINE | ID: mdl-26638174

ABSTRACT

The rapidly evolving internal transcribed spacer 2 (ITS2) in the pre-ribosomal RNA is one of the most commonly applied phylogenetic markers at species and genus level. Yet, during ribosome biogenesis ITS2 is removed in all eukaryotes by a common, but still unknown, mechanism. Here we describe the existence of an RNA processome, assembled from four conserved subunits, Las1-Grc3-Rat1-Rai1, that carries all the necessary RNA processing enzymes to mediate coordinated ITS2 rRNA removal. Las1 is the long-sought-after endonuclease cleaving 27SB pre-rRNA at site C2 to yield a 5'-OH end at the 26S pre-rRNA and 2',3' cyclic phosphate at the 3' end of 7S pre-rRNA. Subsequently, polynucleotide kinase Grc3 catalyzes ATP-dependent 5'-OH phosphorylation of 26S pre-rRNA, which in turn enables Rat1-Rai1 exonuclease to generate 25S' pre-rRNA. ITS2 processing is reminiscent of tRNA splicing, but instead of subsequent tRNA ligation, the Las1 complex carries along an exonuclease tool to degrade the ITS2 rRNA.


Subject(s)
DNA, Ribosomal Spacer/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/genetics , Exoribonucleases/metabolism , Multiprotein Complexes/metabolism , Nuclear Proteins/metabolism , RNA, Fungal/metabolism , RNA, Ribosomal/metabolism , RNA-Binding Proteins , Saccharomyces cerevisiae/enzymology
2.
Exp Diabetes Res ; 2011: 692536, 2011.
Article in English | MEDLINE | ID: mdl-21331343

ABSTRACT

Muscle lipid oxidation is stimulated by peroxisome proliferator-activated receptor (PPAR) δ or adiponectin receptor signalling. We studied human myocyte expression of the PPARδ and adiponectin receptor genes and their relationship to lipid parameters of the donors. The mRNA levels of the three adiponectin receptors, AdipoR1, AdipoR2, and T-cadherin, were highly interrelated (r ≥ 0.91). However, they were not associated with GPBAR1, an unrelated membrane receptor. In addition, the adiponectin receptors were positively associated with PPARδ expression (r ≥ 0.75). However, they were not associated with PPARα. Using stepwise multiple linear regression analysis, PPARδ was a significant determinant of T-cadherin (P = .0002). However, pharmacological PPARδ activation did not increase T-cadherin expression. The myocyte expression levels of AdipoR1 and T-cadherin were inversely associated with the donors' fasting plasma triglycerides (P < .03). In conclusion, myocyte expression of PPARδ and the adiponectin receptors are highly coordinated, and this might be of relevance for human lipid metabolism in vivo.


Subject(s)
Lipid Metabolism , Muscle Cells/metabolism , PPAR delta/genetics , Receptors, Adiponectin/genetics , Adult , Cadherins/genetics , Cells, Cultured , Female , Gene Expression , Glucose Clamp Technique , Glucose Tolerance Test , Humans , Linear Models , Male , Muscle Cells/chemistry , Polymorphism, Single Nucleotide , RNA, Messenger/analysis , Reverse Transcriptase Polymerase Chain Reaction , Signal Transduction , Triglycerides/blood
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