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1.
Sci Rep ; 9(1): 18236, 2019 12 03.
Article in English | MEDLINE | ID: mdl-31796828

ABSTRACT

Sodium valproate/valproic acid (VPA), a histone deacetylase inhibitor, and 5-aza-2-deoxycytidine (5-aza-CdR), a DNA methyltransferase 1 (DNMT1) inhibitor, induce DNA demethylation in several cell types. In HeLa cells, although VPA leads to decreased DNA 5-methylcytosine (5mC) levels, the demethylation pathway involved in this effect is not fully understood. We investigated this process using flow cytometry, ELISA, immunocytochemistry, Western blotting and RT-qPCR in G1 phase-arrested and proliferative HeLa cells compared to the presumably passive demethylation promoted by 5-aza-CdR. The results revealed that VPA acts predominantly on active DNA demethylation because it induced TET2 gene and protein overexpression, decreased 5mC abundance, and increased 5-hydroxy-methylcytosine (5hmC) abundance, in both G1-arrested and proliferative cells. However, because VPA caused decreased DNMT1 gene expression levels, it may also act on the passive demethylation pathway. 5-aza-CdR attenuated DNMT1 gene expression levels but increased TET2 and 5hmC abundance in replicating cells, although it did not affect the gene expression of TETs at any stage of the cell cycle. Therefore, 5-aza-CdR may also function in the active pathway. Because VPA reduces DNA methylation levels in non-replicating HeLa cells, it could be tested as a candidate for the therapeutic reversal of DNA methylation in cells in which cell division is arrested.


Subject(s)
Cell Proliferation/drug effects , DNA Demethylation/drug effects , Decitabine/pharmacology , G1 Phase/drug effects , HeLa Cells/drug effects , Valproic Acid/pharmacology , Blotting, Western , Enzyme-Linked Immunosorbent Assay , Flow Cytometry , Humans , Real-Time Polymerase Chain Reaction
2.
Virol J ; 16(1): 75, 2019 06 03.
Article in English | MEDLINE | ID: mdl-31159841

ABSTRACT

Porcine parvovirus (PPV) is a DNA virus that causes reproductive failure in gilts and sows, resulting in embryonic and fetal losses worldwide. Epitope mapping of PPV is important for developing new vaccines. In this study, we used spot synthesis analysis for epitope mapping of the capsid proteins of PPV (NADL-2 strain) and correlated the findings with predictive data from immunoinformatics. The virus was exposed to three conditions prior to inoculation in pigs: native (untreated), high hydrostatic pressure (350 MPa for 1 h) at room temperature and high hydrostatic pressure (350 MPa for 1 h) at - 18 °C, and was compared with a commercial vaccine produced using inactivated PPV. The screening of serum samples detected 44 positive spots corresponding to 20 antigenic sites. Each type of inoculated antigen elicited a distinct epitope set. In silico prediction located linear and discontinuous epitopes in B cells that coincided with several epitopes detected in spot synthesis of sera from pigs that received different preparations of inoculum. The conditions tested elicited antibodies against the VP1/VP2 antigen that differed in relation to the response time and the profile of structurally available regions that were recognized.


Subject(s)
Antibodies, Viral/blood , Antigens, Viral/immunology , Capsid Proteins/immunology , Epitopes/immunology , Parvovirus, Porcine/immunology , Animals , Antigens, Viral/chemistry , Epitope Mapping , Epitopes/chemistry , Male , Neutralization Tests , Peptides/genetics , Peptides/immunology , Swine
3.
Biotechnol Appl Biochem ; 65(3): 381-389, 2018 May.
Article in English | MEDLINE | ID: mdl-29205941

ABSTRACT

Viral vectors are important in medical approaches, such as disease prevention and gene therapy, and their production depends on efficient prepurification steps. In the present study, an aqueous two-phase micellar system (ATPMS) was evaluated to extract human adenovirus type 5 particles from a cell lysate. Adenovirus was cultured in human embryonic kidney 293 (HEK-293) cells to a concentration of 1.4 × 1010 particles/mL. Cells were lysed, and the system formed by direct addition of Triton X-114 in a 23 full factorial design with center points. The systems were formed with Triton X-114 at a final concentration of 1.0, 6.0, and 11.0% (w/w), cell lysate pH of 6.0, 6.5, and 7.0, and incubation temperatures at 33, 35, and 37 °C. Adenovirus particles recovered from partition phases were measured by qPCR. The best system condition was with 11.0% (w/w) of Triton X-114, a cell lysate pH of 7.0, and an incubation temperature at 33 °C, yielding 3.51 × 1010 adenovirus particles/mL, which increased the initial adenovirus particles concentration by 2.3-fold, purifying it by 2.2-fold from the cell lysate, and removing cell debris. In conclusion, these results demonstrated that the use of an aqueous two-phase micellar system in the early steps of downstream processing could improve viral particle extraction from cultured cells while integrating clarification, concentration, and prepurification steps.


Subject(s)
Adenoviridae/isolation & purification , Cell Extracts/chemistry , Micelles , Water/chemistry , Cells, Cultured , Genetic Vectors/isolation & purification , HEK293 Cells , Humans
4.
Biotechnol Appl Biochem ; 65(3): 381-389, 2018. ilus, tab
Article in English | Sec. Est. Saúde SP, SESSP-IDPCPROD, Sec. Est. Saúde SP | ID: biblio-1060882

ABSTRACT

Viral vectors are important in medical approaches, such as disease prevention and gene therapy, and their production depends on efficient prepurification steps. In the present study, an aqueous two-phase micellar system (ATPMS) was evaluated to extract human adenovirus type 5 particles from a cell lysate. Adenovirus was cultured in human embryonic kidney 293 (HEK-293) cells to a concentration of 1.4 × 1010 particles/mL. Cells were lysed, and the system formed by direct addition of Triton X-114 in a 23 full factorial design with center points. The systems were formed with Triton X-114 at a final concentration of 1.0, 6.0, and 11.0% (w/w), cell lysate pH of 6.0, 6.5, and 7.0, and incubation temperatures at 33, 35, and 37 °C. Adenovirus particles recovered from partition phases were measured by qPCR. The best system condition was with 11.0% (w/w) of Triton X-114, a cell lysate pH of 7.0, and an incubation temperature at 33 °C, yielding 3.51 × 1010 adenovirus particles/mL, which increased the initial adenovirus particles concentration by 2.3-fold, purifying it by 2.2-fold from the cell lysate, and removing cell debris. In conclusion, these results demonstrated that the use of an aqueous two-phase micellar system in the early steps of downstream processing could improve viral particle extraction from cultured cells while integrating clarification, concentration, and prepurification steps.


Subject(s)
Humans , Genetic Vectors/isolation & purification , Water/chemistry
5.
Braz. j. infect. dis ; 20(6): 546-555, Nov.-Dec. 2016. tab, graf
Article in English | LILACS | ID: biblio-828157

ABSTRACT

ABSTRACT Plesiomonas shigelloides isolated from water in Brazil was previously described as a hemorrhagic heat-labile cytotoxic-enterotoxin producer. We purified this toxin from culture supernatants using ion metallic affinity chromatography (IMAC) followed by molecular exclusion chromatography. The pure toxin presented molecular mass of 50 kDa and isoelectric point (pI) around 6.9 by 2D electrophoresis. When injected intravenously, the purified cytotoxic-enterotoxin induced also severe spasms followed by sudden death of mice. Hence, we entitled it as lethal cytotoxic-enterotoxin (LCE). The presence of membrane vesicles (MVs) on cell surfaces of P. shigelloides was observed by scan electron microscopy (SEM). From these MVs the LCE toxin was extracted and confirmed by biological and serological assays. These data suggest that P. shigelloides also exports this cytotoxic-enterotoxin by membrane vesicles, a different mechanism of delivering extra cellular virulence factors, so far not described in this bacterium.


Subject(s)
Animals , Male , Rats , Cell Survival/drug effects , Plesiomonas/metabolism , Cytoplasmic Vesicles , Virulence Factors , Rivers/microbiology , Enterotoxins/pharmacology , Vero Cells , Neutralization Tests , Microscopy, Electron, Scanning , Chlorocebus aethiops , Plesiomonas/pathogenicity , Plesiomonas/ultrastructure , Lethal Dose 50
6.
Braz J Infect Dis ; 20(6): 546-555, 2016.
Article in English | MEDLINE | ID: mdl-27770615

ABSTRACT

Plesiomonas shigelloides isolated from water in Brazil was previously described as a hemorrhagic heat-labile cytotoxic-enterotoxin producer. We purified this toxin from culture supernatants using ion metallic affinity chromatography (IMAC) followed by molecular exclusion chromatography. The pure toxin presented molecular mass of 50kDa and isoelectric point (pI) around 6.9 by 2D electrophoresis. When injected intravenously, the purified cytotoxic-enterotoxin induced also severe spasms followed by sudden death of mice. Hence, we entitled it as lethal cytotoxic-enterotoxin (LCE). The presence of membrane vesicles (MVs) on cell surfaces of P. shigelloides was observed by scan electron microscopy (SEM). From these MVs the LCE toxin was extracted and confirmed by biological and serological assays. These data suggest that P. shigelloides also exports this cytotoxic-enterotoxin by membrane vesicles, a different mechanism of delivering extra cellular virulence factors, so far not described in this bacterium.


Subject(s)
Cell Survival/drug effects , Cytoplasmic Vesicles , Enterotoxins/pharmacology , Plesiomonas/metabolism , Rivers/microbiology , Virulence Factors , Animals , Chlorocebus aethiops , Lethal Dose 50 , Male , Microscopy, Electron, Scanning , Neutralization Tests , Plesiomonas/pathogenicity , Plesiomonas/ultrastructure , Rabbits , Vero Cells
7.
J Virol Methods ; 234: 156-9, 2016 08.
Article in English | MEDLINE | ID: mdl-27131514

ABSTRACT

Rapid, sensitive and specific methods are necessary to detect and quantify infectious viruses. Cultivating and detecting enteric viruses in cell culture are difficult, thus impairing the advancement of knowledge regarding virus-induced diarrhea. Rotavirus (RV) detection has been conducted by serological or molecular biology methods, which do not provide information regarding viral infectivity. Molecular beacons (MBs) have demonstrated efficacy for viral detection in cell culture. We propose a MB assay to detect human rotavirus group A (HuRVA) in cell culture. MA104 cells were mock-infected or infected with HuRVA strains (RotaTeq(®) vaccine and K8 strains), and a specific MB for the HuRVA VP6 gene was used for virus detection. Mock-infected cells showed basal fluorescence, while infected cells exhibited increased fluorescence emission. MB hybridization to the viral mRNA target of HuRVA was confirmed. Fluorescence increased according to the increase in the number of infectious viral particles per cell (MOI 0.5-MOI 1). This technique provides quick and efficient HuRVA detection in cell culture without a need for viral culture for several days or many times until cytopathic effects are visualized. This methodology could be applied in the selection of samples for developing RV vaccines.


Subject(s)
Molecular Probe Techniques , Rotavirus Infections/diagnosis , Rotavirus/isolation & purification , Capsid Proteins/genetics , Cell Culture Techniques/methods , Cell Line , Humans , Rotavirus/genetics , Rotavirus/physiology , Rotavirus Infections/virology , Virus Replication
8.
J Cell Physiol ; 231(10): 2257-65, 2016 10.
Article in English | MEDLINE | ID: mdl-26888775

ABSTRACT

Diabetes is a complex multifactorial disorder characterized by chronic hyperglycemia due to impaired insulin secretion. Recent observations suggest that the complexity of the disease cannot be entirely accounted for genetic predisposition and a compelling argument for an epigenetic component is rapidly emerging. The use of histone deacetylase inhibitor (HDACi) in clinical setting is an emerging area of investigation. In this study, we have aimed to understand and compare the response of hepatocyte chromatin to valproic acid (VPA) and trichostatin A (TSA) treatments under normoglycemic or hyperglycemic conditions to expand our knowledge about the consequences of HDACi treatment in a diabetes cell model. Under normoglycemic conditions, these treatments promoted chromatin remodeling, as assessed by image analysis and H3K9ac and H3K9me2 abundance. Simultaneously, H3K9ac marks shifted to the nuclear periphery accompanied by HP1 dissociation from the heterochromatin and a G1 cell cycle arrest. More striking changes in the cell cycle progression and mitotic ratios required drastic treatment. Under hyperglycemic conditions, high glucose per se promoted chromatin changes similar to those promoted by VPA and TSA. Nonetheless, these results were not intensified in cells treated with HDACis under hyperglycemic conditions. Despite the absence of morphological changes being promoted, HDACi treatment seems to confer a physiological meaning, ameliorating the cellular hyperglycemic state through reduction of glucose production. These observations allow us to conclude that the glucose level to which the hepatocytes are subjected affects how chromatin responds to HDACi and their action under high-glucose environment might not reflect on chromatin remodeling. J. Cell. Physiol. 231: 2257-2265, 2016. © 2016 Wiley Periodicals, Inc.


Subject(s)
Cell Proliferation/drug effects , Chromatin/metabolism , Glucose/metabolism , Hepatocytes/drug effects , Histone Deacetylase Inhibitors/pharmacology , Cell Nucleus/drug effects , Chromatin Assembly and Disassembly , Humans , Hydroxamic Acids/pharmacology , Valproic Acid/pharmacology
9.
Mem Inst Oswaldo Cruz ; 110(6): 786-92, 2015 Sep.
Article in English | MEDLINE | ID: mdl-26517658

ABSTRACT

Group A human rotaviruses (HuRVA) are causative agents of acute gastroenteritis. Six viral structural proteins (VPs) and six nonstructural proteins (NSPs) are produced in RV-infected cells. NSP4 is a diarrhoea-inducing viral enterotoxin and NSP4 gene analysis revealed at least 15 (E1-E15) genotypes. This study analysed the NSP4 genetic diversity of HuRVA G2P[4] strains collected in the state of São Paulo (SP) from 1994 and 2006-2010 using reverse transcription-polymerase chain reaction, sequencing and phylogenetic analysis. Forty (97.6%) G2P[4] strains displayed genotype E2; one strain (2.4%) displayed genotype E1. These results are consistent with the proposed linkage between VP4/VP7 (G2P[4]) and the NSP4 (E2) genotype of HuRVA. NSP4 phylogenetic analysis showed distinct clusters, with grouping of most strains by their genotype and collection year, and most strains from SP were clustered together with strains from other Brazilian states. A deduced amino acid sequence alignment for E2 showed many variations in the C-terminal region, including the VP4-binding domain. Considering the ability of NSP4 to generate host immunity, monitoring NSP4 variations, along with those in the VP4 or VP7 protein, is important for evaluating the circulation and pathogenesis of RV. Finally, the presence of one G2P[4]E1 strain reinforces the idea that new genotype combinations emerge through reassortment and independent segregation.


Subject(s)
Antigens, Viral/isolation & purification , Glycoproteins/genetics , RNA, Viral/genetics , Rotavirus/genetics , Toxins, Biological/genetics , Viral Nonstructural Proteins/genetics , Adult , Amino Acid Sequence , Base Sequence , Brazil , Child , Feces/virology , Genetic Linkage/genetics , Genetic Variation , Genotype , Humans , Immunoenzyme Techniques , Molecular Sequence Data , Phylogeny , RNA, Viral/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction , Rotavirus/classification , Rotavirus/immunology , Sequence Alignment
10.
Rev Inst Med Trop Sao Paulo ; 57(4): 349-51, 2015.
Article in English | MEDLINE | ID: mdl-26422161

ABSTRACT

In the present study enterotoxic and cytotoxic activities of twenty Aeromonas caviae strains were examined. They originated from fecal specimens of patients with acute diarrhea during an outbreak in Brazil in 2004. Culture supernatants of fourteen strains (70%) caused fluid accumulation in rabbit ileal intestinal loops and in suckling mice assays, and also showed a cytotoxic activity in Vero and Caco-2 cells. The enterotoxic and cytotoxic factors were heat-stable after culture supernatants treatment at 100 ºC. The results revealed that A. caviae strains produce a putative diarrheagenic virulence factor, a heat-stable cytotoxic enterotoxin that could be linked to the diarrhea outbreak that took place in Brazil.


Subject(s)
Aeromonas caviae/pathogenicity , Enterotoxins/biosynthesis , Virulence Factors/biosynthesis , Animals , Brazil , Cell Line , Diarrhea/microbiology , Disease Outbreaks , Humans , Mice , Mice, Inbred BALB C , Rabbits
11.
Mem. Inst. Oswaldo Cruz ; 110(6): 786-792, Sept. 2015. tab, graf
Article in English | LILACS | ID: lil-763094

ABSTRACT

Group A human rotaviruses (HuRVA) are causative agents of acute gastroenteritis. Six viral structural proteins (VPs) and six nonstructural proteins (NSPs) are produced in RV-infected cells. NSP4 is a diarrhoea-inducing viral enterotoxin and NSP4 gene analysis revealed at least 15 (E1-E15) genotypes. This study analysed the NSP4 genetic diversity of HuRVA G2P[4] strains collected in the state of São Paulo (SP) from 1994 and 2006-2010 using reverse transcription-polymerase chain reaction, sequencing and phylogenetic analysis. Forty (97.6%) G2P[4] strains displayed genotype E2; one strain (2.4%) displayed genotype E1. These results are consistent with the proposed linkage between VP4/VP7 (G2P[4]) and the NSP4 (E2) genotype of HuRVA. NSP4 phylogenetic analysis showed distinct clusters, with grouping of most strains by their genotype and collection year, and most strains from SP were clustered together with strains from other Brazilian states. A deduced amino acid sequence alignment for E2 showed many variations in the C-terminal region, including the VP4-binding domain. Considering the ability of NSP4 to generate host immunity, monitoring NSP4 variations, along with those in the VP4 or VP7 protein, is important for evaluating the circulation and pathogenesis of RV. Finally, the presence of one G2P[4]E1 strain reinforces the idea that new genotype combinations emerge through reassortment and independent segregation.


Subject(s)
Adult , Child , Humans , Antigens, Viral/isolation & purification , Glycoproteins/genetics , RNA, Viral/genetics , Rotavirus/genetics , Toxins, Biological/genetics , Viral Nonstructural Proteins/genetics , Amino Acid Sequence , Base Sequence , Brazil , Feces/virology , Genetic Variation , Genotype , Genetic Linkage/genetics , Immunoenzyme Techniques , Molecular Sequence Data , Phylogeny , Reverse Transcriptase Polymerase Chain Reaction , RNA, Viral/isolation & purification , Rotavirus/classification , Rotavirus/immunology , Sequence Alignment
12.
Rev. Inst. Med. Trop. Säo Paulo ; 57(4): 349-351, July-Aug. 2015. ilus
Article in English | LILACS | ID: lil-761159

ABSTRACT

SUMMARYIn the present study enterotoxic and cytotoxic activities of twenty Aeromonas caviaestrains were examined. They originated from fecal specimens of patients with acute diarrhea during an outbreak in Brazil in 2004. Culture supernatants of fourteen strains (70%) caused fluid accumulation in rabbit ileal intestinal loops and in suckling mice assays, and also showed a cytotoxic activity in Vero and Caco-2 cells. The enterotoxic and cytotoxic factors were heat-stable after culture supernatants treatment at 100 ºC. The results revealed that A. caviaestrains produce a putative diarrheagenic virulence factor, a heat-stable cytotoxic enterotoxin that could be linked to the diarrhea outbreak that took place in Brazil.


RESUMOEm 2004 ocorreu um surto de diarreia aguda no Estado de Pernambuco, Brasil. Setenta por cento (14 dos 20) dos sobrenadantes de cultura de Aeromonas caviae,isoladas neste episódio induziram acúmulo de líquido em testes de alça ligada de intestino de coelhos, assim como em teste em camundongos recém-nascidos. Os mesmos sobrenadantes mostraram também atividade citotóxica em células de Vero e Caco-2, mas não em células HeLa e HEp2. As atividades enterotóxicas e citotóxicas mantiveram-se mesmo após o aquecimento a 100 ºC dos sobrenadantes de cultura. Este trabalho revela a expressão de um provável fator diarreiogênico: uma enterotoxina-citotóxica termo-estável, produzida por A. caviaeque pode ser associada ao surto de diarreia ocorrido no Brasil. Atualmente estamos purificando esta enterotoxina termo-estável, com o objetivo de elucidar seu papel como fator de virulência na diarreia causada por A. caviae.


Subject(s)
Humans , Animals , Mice , Rabbits , Aeromonas caviae/pathogenicity , Enterotoxins/biosynthesis , Virulence Factors/biosynthesis , Brazil , Cell Line , Diarrhea/microbiology , Disease Outbreaks , Mice, Inbred BALB C
13.
J Cell Biochem ; 115(11): 1937-47, 2014 Nov.
Article in English | MEDLINE | ID: mdl-24913611

ABSTRACT

Valproic acid (VPA) and trichostatin A (TSA) are known histone deacetylase inhibitors (HDACIs) with epigenetic activity that affect chromatin supra-organization, nuclear architecture, and cellular proliferation, particularly in tumor cells. In this study, chromatin remodeling with effects extending to heterochromatic areas was investigated by image analysis in non-transformed NIH 3T3 cells treated for different periods with different doses of VPA and TSA under conditions that indicated no loss of cell viability. Image analysis revealed chromatin decondensation that affected not only euchromatin but also heterochromatin, concomitant with a decreased activity of histone deacetylases and a general increase in histone H3 acetylation. Heterochromatin protein 1-α (HP1-α), identified immunocytochemically, was depleted from the pericentromeric heterochromatin following exposure to both HDACIs. Drastic changes affecting cell proliferation and micronucleation but not alteration in CCND2 expression and in ratios of Bcl-2/Bax expression and cell death occurred following a 48-h exposure of the NIH 3T3 cells particularly in response to higher doses of VPA. Our results demonstrated that even low doses of VPA (0.05 mM) and TSA (10 ng/ml) treatments for 1 h can affect chromatin structure, including that of the heterochromatin areas, in non-transformed cells. HP1-α depletion, probably related to histone demethylation at H3K9me3, in addition to the effect of VPA and TSA on histone H3 acetylation, is induced on NIH 3T3 cells. Despite these facts, alterations in cell proliferation and micronucleation, possibly depending on mitotic spindle defects, require a longer exposure to higher doses of VPA and TSA.


Subject(s)
Chromatin/drug effects , Histone Deacetylase Inhibitors/pharmacology , Hydroxamic Acids/pharmacology , Valproic Acid/pharmacology , Animals , Cell Proliferation/drug effects , Chromobox Protein Homolog 5 , Chromosomal Proteins, Non-Histone/genetics , Chromosomal Proteins, Non-Histone/metabolism , Gene Expression Regulation/drug effects , Mice , NIH 3T3 Cells
14.
Foodborne Pathog Dis ; 11(6): 484-9, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24673684

ABSTRACT

Avian pathogenic Escherichia coli (APEC) strains harbor a number of virulence genes and cause extraintestinal diseases, such as septicemia, swollen-head syndrome, salpingitis, and omphalitis in poultry. APEC strains are not known to cause intestinal diseases. Herein, for the first time, it is reported that APEC strains were able to induce an enterotoxigenic-like effect in rabbit ligated ileal loops. Strain SEPT362 caused cell detachment of the intestinal villi, which also showed a flattened and wilted appearance, but the integrity of the tight junctions was maintained. Additionally, this strain did not adhere to enterocytes in vivo, although adhesin encoding genes ( fimH, csgA, lpfA2-3, and ECP) were present while other lpfA types, sfa, afa, papC, and ral genes were not. This enterotoxigenic-like activity was conserved after thermal treatment of the supernatant at 65°C but not at 100°C. Moreover, experiments based on filtering with different molecular weight cut-off (MWCO) pore sizes demonstrated that the component associated with the observed biological effect has a molecular weight >100 kDa. Blast search and polymerase chain reaction assays for known E. coli virulence factors showed that strain SEPT362 harbors the gene encoding for the toxin EAST-1 and the serine protease autotransporter (SPATE) Tsh, but is negative for genes encoding for the toxins LT-I, STh, STp, Stx1, Stx2, CNF-1, CNF-2, CDT and the SPATEs Sat, Pic, Vat, SigA, SepA, EatA, EspP, or EspC. A cloned copy of the tsh gene in E. coli K-12 was also tested and was shown to have an enterotoxic effect. These results suggest that APEC might induce fluid accumulation in the rabbit gut. The Tsh autotransporter seems to be one of the factors associated with this phenotype.


Subject(s)
Adhesins, Escherichia coli/metabolism , Enteritis/microbiology , Enterotoxigenic Escherichia coli/metabolism , Enterotoxins/metabolism , Escherichia coli Infections/microbiology , Ileum/microbiology , Intestinal Mucosa/microbiology , Adhesins, Escherichia coli/genetics , Adhesins, Escherichia coli/toxicity , Animals , Bacterial Adhesion , Chickens/microbiology , Enteritis/pathology , Enteritis/physiopathology , Enterotoxigenic Escherichia coli/growth & development , Enterotoxigenic Escherichia coli/isolation & purification , Enterotoxins/genetics , Enterotoxins/toxicity , Escherichia coli Infections/pathology , Escherichia coli Infections/physiopathology , Escherichia coli Infections/veterinary , Hot Temperature , Ileum/metabolism , Ileum/ultrastructure , In Vitro Techniques , Intestinal Mucosa/metabolism , Intestinal Mucosa/ultrastructure , Liver/microbiology , Male , Poultry Diseases/microbiology , Rabbits , Recombinant Proteins/metabolism , Recombinant Proteins/toxicity , Sepsis/microbiology , Sepsis/veterinary , Virulence Factors/genetics , Virulence Factors/metabolism , Virulence Factors/toxicity , Water-Electrolyte Imbalance/etiology
15.
Biotechnol Prog ; 29(6): 1343-53, 2013.
Article in English | MEDLINE | ID: mdl-23925947

ABSTRACT

Upstream improvements have led to significant advances in the productivity of biomolecules and bioparticles. Today, downstream processes are the bottleneck in the production of some biopharmaceuticals, a change from previous years. Current purification platforms will reach their physical limits at some point, indicating the need for new approaches. This article reviews an alternative method to extract and purify biomolecules/bioparticles named aqueous two-phase system (ATPS). Biocompatibility and readiness to scale up are some of the ATPS characteristics. We also discuss some of ATPS applications in the biotechnology field.


Subject(s)
Biotechnology , Proteins/isolation & purification , Water/chemistry , Biopharmaceutics , Humans , Proteins/chemistry
16.
J Infect Dev Ctries ; 6(2): 176-80, 2012 Feb 13.
Article in English | MEDLINE | ID: mdl-22337847

ABSTRACT

INTRODUCTION: The diarrhea associated with gastroenteritis is a major cause of morbidity and mortality worldwide, affecting mainly infants. The characterization of both viral and bacterial agents associated with gastroenteritis can establish policies for surveillance, prevention and treatment of infections. Group A rotaviruses are the major infectious agent associated with dehydration in children, followed by pathotypes of Escherichia coli. There are three main types of clinical infections caused by E. coli strains that have acquired virulence genes: (i) enteric and diarrheal diseases, (ii) urinary tract infections, and (iii) sepsis and meningitis. METHODOLOGY: In this study, the objective was to identify the presence of rotavirus and diarrhogenic E. coli in the feces of children 4 to 14 months of age who displayed no gastroenteritis symptoms and stayed all day in a day-care center. We analyzed 188 samples using PAGE and PCR to identify rotaviruses and E. coli virulence genes, respectively. RESULTS: Thirty-six samples (19.1%) were positive for at least one pathotype of E. coli. Nineteen were identified to be of the EPEC group and fifteen of the EAEC group. Rotaviruses were not identified. CONCLUSIONS: As EPEC and EAEC are potential pathogens for children less than one year of age or immunocompromised individuals, our results show the importance of appropriate monitoring by public health agencies. In the situation that we have studied, children can be considered asymptomatic carriers of these pathogens and can transmit them to other susceptible children.


Subject(s)
Carrier State/epidemiology , Carrier State/microbiology , Escherichia coli/isolation & purification , Feces/microbiology , Rotavirus/isolation & purification , Brazil , Child Day Care Centers , Female , Humans , Infant , Male , Prevalence
17.
Arch Virol ; 154(12): 1953-4, 2009.
Article in English | MEDLINE | ID: mdl-19882102

ABSTRACT

Picobirnaviruses have been identified in the feces of a broad range of hosts by several international research groups. Because there is no standard nomenclature for these viruses, we propose a clear and unique name for each strain.


Subject(s)
Picobirnavirus/classification , Terminology as Topic , Animals , DNA Primers , Feces/virology , Host-Pathogen Interactions , Humans , Picobirnavirus/genetics , RNA Virus Infections/veterinary , RNA Virus Infections/virology , Rabbits , Species Specificity
18.
Virus Res ; 143(1): 134-6, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19463731

ABSTRACT

Picobirnaviruses (PBVs) have recently been classified into the Picobirnaviridae family. They are small, non-enveloped viruses with bisegmented, double-stranded (ds) RNA genomes. Although they are found in the feces of a broad range of hosts, information regarding their genomes is limited to viruses detected from humans, rabbits, and porcine. Identification of PBVs has been done using PAGE and reverse transcription PCR (RT-PCR). In this study, we present a phylogenetic analysis of PBVs detected in the feces of dogs, snakes, and rats. In addition, we compare these strains to those from human and porcine hosts. To do so, 487 fecal specimens from dogs, snakes and rats were analyzed by PAGE. The positive specimens for PBV were tested by RT-PCR using primers for genogroup I of the PBVs. From the 11 genogroup I PBV samples, at least one from each host was sequenced and submitted for phylogenetic analysis. All of the sequences showed high homology with the human and porcine genogroup I PBV sequences. In this study we report the first detection of PBVs in snakes (8.5%). We also report a phylogenetic analysis that goes beyond humans and pigs to include dogs, rats, and snakes. However, more hosts must be included in the analysis so that we may reach better conclusions regarding the spread of these viruses.


Subject(s)
Dogs/virology , Picobirnavirus/genetics , RNA Virus Infections/veterinary , Rats/virology , Snakes/virology , Swine/virology , Animals , Electrophoresis, Gel, Two-Dimensional , Feces/virology , Humans , Molecular Sequence Data , Phylogeny , Picobirnavirus/isolation & purification , RNA Virus Infections/virology , RNA, Viral/analysis , RNA, Viral/genetics , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, DNA , Sequence Homology, Nucleic Acid
19.
J Clin Virol ; 43(2): 244-6, 2008 Oct.
Article in English | MEDLINE | ID: mdl-18693133

ABSTRACT

BACKGROUND: Rotavirus serotypes G1-G4 and G9 are the most important agents of severe diarrhea in children worldwide. OBJECTIVE: To characterize rotavirus serotypes/genotypes causing two large outbreaks of diarrhea in Campinas, São Paulo, during 2003-2004. STUDY: Rotavirus infection was investigated in 328 stool specimens collected from children and adults with diarrhea by PAGE and RT-PCR and further characterized by semi-nested PCR-typing assays. RESULTS: G3P[8] (26.1%), G9P[8] (18.7%) and G1P[8] (17.9%) were the most frequently detected serotypes/genotypes. G1P[8] was predominant in 2003, but significantly decreased the following year when G3P[8] and G9P[8] prevailed. G5P[8] was identified in about 9% of the typed specimens from each year consistent with its endemic nature in Brazil for over two decades. The other globally common serotypes (G4P[8] and G2P[4]), uncommon G-P combinations, and multiple G serotypes were also found. Rarely found in humans, and not previously reported in Brazil, serotype G6 was identified in three specimens obtained from children in 2004. CONCLUSION: Multiple rotavirus serotypes were observed co-circulating in the city with serotype predominance changing between the two-year study. This study provides pre-vaccine baseline information on locally endemic strains that might help analysis of post-vaccine data.


Subject(s)
Disease Outbreaks , Gastroenteritis/epidemiology , Rotavirus Infections/epidemiology , Rotavirus/classification , Rotavirus/genetics , Adult , Brazil/epidemiology , Child , Child, Preschool , Electrophoresis, Polyacrylamide Gel , Gastroenteritis/virology , Genotype , Humans , Reverse Transcriptase Polymerase Chain Reaction , Rotavirus/isolation & purification , Rotavirus Infections/virology , Serotyping
20.
Comp Med ; 55(5): 459-64, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16270903

ABSTRACT

Theiler's murine encephalomyelitis virus (TMEV), a member of the genus Cardiovirus, is an enteric pathogen of mice that causes acute encephalomyelitis followed by persistent central nervous system infection with chronic inflammation and demyelination after intracerebral inoculation. Although TMEV is a mouse pathogen, antibodies against TMEV strain GDVII have been detected in conventional rat colonies. Natural infection of rats by Cardiovirus has not yet been described. The purpose of this study was to demonstrate TMEV infection of rat colonies by using serologic assays, reverse transcription-polymerase chain reaction (RT-PCR) analysis, and clinical characterization. Indirect immunofluorescence assay of rat serum samples demonstrated antibodies against TMEV-GDVII in 86.3% of samples analyzed, and 77.2% of the antibody-positive samples had neutralizing antibodies. To determine whether rats can be infected experimentally with TMEV-GDVII, specific pathogen-free newborn mice and rats were inoculated intracerebrally with intestinal suspensions from seropositive rats. Both species showed the typical clinical signs of TMEV infection in mice, which is characterized by flaccid hindlimb paralysis and tremor. RT-PCR in brain tissue of experimentally infected animals detected RNA sequences corresponding to the 5' noncoding region of Cardiovirus known as the 'internal ribosome entry site.' These results suggest that rats can be naturally infected with TMEV and related Cardiovirus. Therefore, continued health monitoring for TMEV infection should be included in rat colonies mainly because these animals are used for various experimental purposes.


Subject(s)
Rats, Wistar/virology , Theilovirus/isolation & purification , Animals , Base Sequence , Cell Line , Cricetinae , DNA Primers , Mice , Mice, Inbred BALB C , Rats , Reverse Transcriptase Polymerase Chain Reaction , Theilovirus/genetics
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