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1.
Molecules ; 27(10)2022 May 15.
Article in English | MEDLINE | ID: mdl-35630637

ABSTRACT

The tight binding of Cu and Zn ions to superoxide dismutase 1 (SOD1) maintains the protein stability, associated with amyotrophic lateral sclerosis (ALS). Yet, the quantitative studies remain to be explored for the metal-binding affinity of wild-type SOD1 and its mutants. We have investigated the demetallation of Cu,Zn-SOD1 and its ALS-related G93A mutant in the presence of different standard metal ion chelators at varying temperatures by using an LC-ICP MS-based approach and fast size-exclusion chromatography. Our results showed that from the slow first-order kinetics both metal ions Zn2+ and Cu2+ were released simultaneously from the protein at elevated temperatures. The rate of the release depends on the concentration of chelating ligands but is almost independent of their metal-binding affinities. Similar studies with the G93A mutant of Cu,Zn-SOD1 revealed slightly faster metal-release. The demetallation of Cu,Zn-SOD1 comes always to completion, which hindered the calculation of the KD values. From the Arrhenius plots of the demetallation in the absence of chelators ΔH‡ = 173 kJ/mol for wt and 191 kJ/mol for G93A mutant Cu,Zn-SOD1 was estimated. Obtained high ΔH values are indicative of the occurrence of protein conformational changes before demetallation and we concluded that Cu,Zn-SOD1 complex is in native conditions kinetically inert. The fibrillization of both forms of SOD1 was similar.


Subject(s)
Amyotrophic Lateral Sclerosis , Amyotrophic Lateral Sclerosis/genetics , Chelating Agents , Copper/chemistry , Humans , Ions , Superoxide Dismutase/metabolism , Superoxide Dismutase-1/genetics , Zinc/metabolism
2.
Methods ; 87: 46-58, 2015 Oct 01.
Article in English | MEDLINE | ID: mdl-26044649

ABSTRACT

Clinical implementation of exosome based diagnostic and therapeutic applications is still limited by the lack of standardized technologies that integrate efficient isolation of exosomes with comprehensive detection of relevant biomarkers. Conventional methods for exosome isolation based on their physical properties such as size and density (filtration, ultracentrifugation or density gradient), or relying on their differential solubility (chemical precipitation) are established primarily for processing of cell supernatants and later adjusted to complex biological samples such as plasma. Though still representing gold standard in the field, these methods are clearly suboptimal for processing of routine clinical samples and have intrinsic limits that impair their use in biomarker discovery and development of novel diagnostics. Immunoisolation (IA) offers unique advantages for the recovery of exosomes from complex and viscous fluids, in terms of increased efficiency and specificity of exosome capture, integrity and selective origin of isolated vesicles. We have evaluated several commercially available solutions for immunoplate- and immunobead-based affinity isolation and have further optimized protocols to decrease non-specific binding due to exosomes complexity and matrix contaminants. In order to identify best molecular targets for total exosome capture from diverse biological sources, as well as for selective enrichment in populations of interest (e.g. tumor derived exosomes) several exosome displayed proteins and respective antibodies have been evaluated for plate and bead functionalisation. Moreover, we have optimized and directly implemented downstream steps allowing on-line quantification and characterization of bound exosome markers, namely proteins and RNAs. Thus assembled assays enabled rapid overall quantification and validation of specific exosome associated targets in/on plasma exosomes, with multifold increased yield and enrichment ratio over benchmarking technologies. Assays directly coupling selective immobilization of exosomes to a solid phase and their immune- and or molecular profiling through conventional ELISA and PCR analysis, resulted in easy-to-elaborate, quantitative readouts, with high low-end sensitivity and dynamic range, low costs and hands-on time, minimal sample handling and downscaling of a working plasma volumes to as few as 100 µl.


Subject(s)
Biomarkers, Tumor/isolation & purification , Colonic Neoplasms/blood , Exosomes/chemistry , Neoplasm Proteins/isolation & purification , Prostatic Neoplasms/blood , RNA, Neoplasm/isolation & purification , Biological Transport , Biomarkers, Tumor/blood , Biomarkers, Tumor/genetics , Cell Fractionation/methods , Cell Line, Tumor , Colonic Neoplasms/diagnosis , Colonic Neoplasms/genetics , Colonic Neoplasms/pathology , Enzyme-Linked Immunosorbent Assay/methods , Humans , Male , Neoplasm Proteins/genetics , Neoplastic Cells, Circulating , Polymerase Chain Reaction , Prostatic Neoplasms/diagnosis , Prostatic Neoplasms/genetics , Prostatic Neoplasms/pathology , RNA, Neoplasm/blood , RNA, Neoplasm/genetics , Ultracentrifugation
3.
Metallomics ; 6(7): 1296-300, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24889871

ABSTRACT

Zinc is an essential trace element involved in the correct packing and storage of insulin. Total zinc content in the pancreatic ß-cells is among the highest in the body and changes in the Zn(2+) levels have been found to be associated with diabetes. The most common form of the Zn-insulin complex is a hexamer containing two zinc ions. However, zinc can also form other complexes with insulin, whereas dissociation constants of these complexes are not known. We have determined that the dissociation constant value of the monomeric 1 : 1 Zn-insulin complex is equal to 0.40 µM. The apparent binding affinity decreases drastically at higher insulin concentrations where the peptide forms dimers. Cu(2+) ions also bind to monomeric insulin, whereas the apparent Cu(2+)-binding affinity depends on HEPES concentration. The conditional dissociation constant of the Cu(2+)-insulin complex is equal to 0.025 µM. The analysis demonstrates that insulin cannot form complexes with zinc ions in circulation due to the low concentration of free Zn(2+) in this environment.


Subject(s)
Copper/chemistry , Insulin/metabolism , Zinc/chemistry , Cations, Divalent/chemistry , HEPES/administration & dosage , Insulin/chemistry , Kinetics , Protein Binding/drug effects , Protein Structure, Quaternary , Spectrometry, Fluorescence
4.
Biochem J ; 430(3): 511-8, 2010 Sep 15.
Article in English | MEDLINE | ID: mdl-20632994

ABSTRACT

Insulin, a 51-residue peptide hormone, is an intrinsically amyloidogenic peptide, forming amyloid fibrils in vitro. In the secretory granules, insulin is densely packed together with Zn(II) into crystals of Zn(2)Insulin(6) hexamer, which assures osmotic stability of vesicles and prevents fibrillation of the peptide. However, after release from the pancreatic beta-cells, insulin dissociates into active monomers, which tend to fibrillize not only at acidic, but also at physiological, pH values. The effect of co-secreted Zn(II) ions on the fibrillation of monomeric insulin is unknown, however, it might prevent insulin fibrillation. We showed that Zn(II) inhibits fibrillation of monomeric insulin at physiological pH values by forming a soluble Zn(II)-insulin complex. The inhibitory effect of Zn(II) ions is very strong at pH 7.3 (IC(50)=3.5 microM), whereas at pH 5.5 it progressively weakens, pointing towards participation of the histidine residue(s) in complex formation. The results obtained indicate that Zn(II) ions might suppress fibrillation of insulin at its release sites and in circulation. It is hypothesized that misfolded oligomeric intermediates occurring in the insulin fibrillation pathway, especially in zinc-deficient conditions, might induce autoantibodies against insulin, which leads to beta-cell damage and autoimmune Type 1 diabetes.


Subject(s)
Amyloid/chemistry , Insulin/chemistry , Organometallic Compounds/chemistry , Zinc/chemistry , Algorithms , Amyloid/metabolism , Amyloid/ultrastructure , Hydrogen-Ion Concentration , Insulin/metabolism , Ions , Kinetics , Microscopy, Electron, Transmission , Organometallic Compounds/metabolism , Protein Binding , Protein Multimerization , Spectrometry, Mass, Electrospray Ionization , Temperature , Zinc/metabolism
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