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1.
Biochemistry ; 51(46): 9384-93, 2012 Nov 20.
Article in English | MEDLINE | ID: mdl-23121397

ABSTRACT

The factor H binding protein (fHbp) is a key virulence factor of Neisseria meningitidis that confers to the bacterium the ability to resist killing by human serum. The determination of its three-dimensional structure revealed that the carboxyl terminus of the protein folds into an eight-stranded ß barrel. The structural similarity of this part of the protein to lipocalins provided the rationale for exploring the ability of fHbp to bind siderophores. We found that fHbp was able to bind in vitro siderophores belonging to the cathecolate family and mapped the interaction site by nuclear magnetic resonance. Our results indicated that the enterobactin binding site was distinct from the site involved in binding to human factor H and stimulates new hypotheses about possible multiple activities of fHbp.


Subject(s)
Bacterial Proteins/metabolism , Complement Factor H/metabolism , Neisseria meningitidis/metabolism , Siderophores/metabolism , Electrophoresis, Polyacrylamide Gel , Nuclear Magnetic Resonance, Biomolecular , Protein Binding , Surface Plasmon Resonance
2.
PLoS One ; 7(1): e29076, 2012.
Article in English | MEDLINE | ID: mdl-22253705

ABSTRACT

Three-dimensional domain swapping is a common phenomenon in pancreatic-like ribonucleases. In the aggregated state, these proteins acquire new biological functions, including selective cytotoxicity against tumour cells. RNase A is able to dislocate both N- and C-termini, but usually this process requires denaturing conditions. In contrast, bovine seminal ribonuclease (BS-RNase), which is a homo-dimeric protein sharing 80% of sequence identity with RNase A, occurs natively as a mixture of swapped and unswapped isoforms. The presence of two disulfides bridging the subunits, indeed, ensures a dimeric structure also to the unswapped molecule. In vitro, the two BS-RNase isoforms interconvert under physiological conditions. Since the tendency to swap is often related to the instability of the monomeric proteins, in these paper we have analysed in detail the stability in solution of the monomeric derivative of BS-RNase (mBS) by a combination of NMR studies and Molecular Dynamics Simulations. The refinement of NMR structure and relaxation data indicate a close similarity with RNase A, without any evidence of aggregation or partial opening. The high compactness of mBS structure is confirmed also by H/D exchange, urea denaturation, and TEMPOL mapping of the protein surface. The present extensive structural and dynamic investigation of (monomeric) mBS did not show any experimental evidence that could explain the known differences in swapping between BS-RNase and RNase A. Hence, we conclude that the swapping in BS-RNase must be influenced by the distinct features of the dimers, suggesting a prominent role for the interchain disulfide bridges.


Subject(s)
Endoribonucleases/chemistry , Endoribonucleases/metabolism , Magnetic Resonance Spectroscopy/methods , Animals , Cattle , Cyclic N-Oxides/pharmacology , Deuterium Exchange Measurement , Molecular Dynamics Simulation , Protein Structure, Tertiary , Protein Unfolding/drug effects , Spin Labels , Surface Properties/drug effects , Thermodynamics , Urea/pharmacology
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