Laboratory confirmation of C60(+) as the carrier of two diffuse interstellar bands.

The diffuse interstellar bands are absorption lines seen towards reddened stars. None of the molecules responsible for these bands have been conclusively identified. Two bands at 9,632 ångströms and 9,577 ångströms were reported in 1994, and were suggested to arise from C60(+) molecules (ref. 3), on the basis of the proximity of these wavelengths to the absorption bands of C60(+) measured in a neon matrix. Confirmation of this assignment requires the gas-phase spectrum of C60(+). Here we report laboratory spectroscopy of C60(+) in the gas phase, cooled to 5.8 kelvin. The absorption spectrum has maxima at 9,632.7 ± 0.1 ångströms and 9,577.5 ± 0.1 ångströms, and the full widths at half-maximum of these bands are 2.2 ± 0.2 ångströms and 2.5 ± 0.2 ångströms, respectively. We conclude that we have positively identified the diffuse interstellar bands at 9,632 ångströms and 9,577 ångströms as arising from C60(+) in the interstellar medium.

Interaction of O(-) and H2 at low temperatures.

Reactive collisions between O(-) and H2 have been studied experimentally at temperatures ranging from 10 K to 300 K using a cryogenic radiofrequency 22-pole ion trap. The rate coefficients for associative detachment, leading to H2O + e(-), increase with decreasing temperature and reach a flat maximum of 1.8 × 10(-9) cm(3) s(-1) at temperatures between 20 K and 80 K. There, the overall reaction probability is in good agreement with a capture model indicating efficient non-adiabatic couplings between the entrance potential energy surfaces. Classical trajectory calculations on newly calculated potential energy surfaces as well as the topology of the conical intersection seam leading to the neutral surface corroborate this. The formation of OH(-) + H via hydrogen transfer, although occurring with a probability of a few percent only (about 5 × 10(-11) cm(3) s(-1) at temperatures 10-300 K), indicates that there are reaction paths, where electron detachment is avoided.

Esperanto for histones: CENP-A, not CenH3, is the centromeric histone H3 variant.

The first centromeric protein identified in any species was CENP-A, a divergent member of the histone H3 family that was recognised by autoantibodies from patients with scleroderma-spectrum disease. It has recently been suggested to rename this protein CenH3. Here, we argue that the original name should be maintained both because it is the basis of a long established nomenclature for centromere proteins and because it avoids confusion due to the presence of canonical histone H3 at centromeres.

State specific stabilization of H+ + H2(j) collision complexes.

Stabilization of H3(+) collision complexes has been studied at nominal temperatures between 11 and 33 K using a 22-pole radio frequency (rf) ion trap. Apparent binary rate coefficients, k(*) = kr + k3[H2], have been measured for para- and normal-hydrogen at number densities between some 10(11) and 10(14) cm(-3). The state specific rate coefficients extracted for radiative stabilization, kr(T;j), are all below 2 × 10(-16) cm(3) s(-1). There is a slight tendency to decrease with increasing temperature. In contrast to simple expectations, kr(11 K;j) is for j = 0 a factor of 2 smaller than for j = 1. The ternary rate coefficients for p-H2 show a rather steep T-dependence; however, they are increasing with temperature. The state specific ternary rate coefficients, k3(T;j), measured for j = 0 and derived for j = 1 from measurements with n-H2, differ by an order of magnitude. Most of these surprising observations are in disagreement with predictions from standard association models, which are based on statistical assumptions and the separation of complex formation and competition between stabilization and decay. Most probably, the unexpected collision dynamics are due to the fact that, at the low translational energies of the present experiment, only a small number of partial waves participate. This should make exact quantum mechanical calculations of kr feasible. More complex is three-body stabilization, because it occurs on the H5(+) potential energy surface.

Dynamics of the D+ + H2 and H+ + D2 reactions: a detailed comparison between theory and experiment.

An extensive set of experimental measurements on the dynamics of the H(+) + D(2) and D(+) + H(2) ion-molecule reactions is compared with the results of quantum mechanical (QM), quasiclassical trajectory (QCT), and statistical quasiclassical trajectory (SQCT) calculations. The dynamical observables considered include specific rate coefficients as a function of the translational energy, E(T), thermal rate coefficients in the 100-500 K temperature range. In addition, kinetic energy spectra (KES) of the D(+) ions reactively scattered in H(+) + D(2) collisions are also presented for translational energies between 0.4 eV and 2.0 eV. For the two reactions, the best global agreement between experiment and theory over the whole energy range corresponds to the QCT calculations using a gaussian binning (GB) procedure, which gives more weight to trajectories whose product vibrational action is closer to the actual integer QM values. The QM calculations also perform well, although somewhat worse over the more limited range of translational energies where they are available (E(T) < 0.6 eV and E(T) < 0.2 eV for the H(+) + D(2) and D(+) + H(2) reactions, respectively). The worst agreement is obtained with the SQCT method, which is only adequate for low translational energies. The comparison between theory and experiment also suggests that the most reliable rate coefficient measurements are those obtained with the merged beams technique. It is worth noting that none of the theoretical approaches can account satisfactorily for the experimental specific rate coefficients of H(+) + D(2) for E(T)≤ 0.2 eV although there is a considerable scatter in the existing measurements. On the whole, the best agreement with the experimental laboratory KES is obtained with the simulations carried out using the state resolved differential cross sections (DCSs) calculated with the QCT-GB method, which seems to account for most of the observed features. In contrast, the simulations with the SQCT data predict kinetic energy spectra (KES) considerably cooler than those experimentally determined.

Nuclear spin effect on recombination of H3⁺ ions with electrons at 77 K.

Utilizing different ratios of para to ortho H2 in normal and para enriched hydrogen, we varied the population of para-H3⁺ in an H3⁺ dominated plasma at 77 K. Absorption spectroscopy was used to measure the densities of the two lowest rotational states of H3⁺. Monitoring plasma decays at different populations of para-H3⁺ allowed us to determine the rate coefficients for binary recombination of para-H3⁺ and ortho-H3⁺ ions: (p)α(bin)(77 K) = (1.9 ± 0.4) × 10⁻7 cm³ s⁻¹ and (o)α(bin)(77 K) = (0.2 ± 0.2) × 10⁻7 cm³ s⁻¹.

Buffer gas cooling of polyatomic ions in rf multi-electrode traps.

Cooling all degrees of freedom of a molecule, a cluster, or even a nanoparticle which is suspended in a vacuum, is an experimental challenge. Without suitable schemes, cold or ultracold chemical reactions are not feasible. Methods such as laser based preparation of very slow atoms, decelerating molecules to low velocities with electric fields or freezing molecular ions into Coulomb crystals, are generally not suitable to cool the vibrational or rotational motion of molecules. This contribution describes a new method in which a beam of slow atoms or molecules (H, He, H2, or D2) is used for cooling charged particles confined in a multi-electrode rf trap. For reaching sub-K temperatures, the fast part of a cold effusive beam is removed with a shutter before the slow remaining neutrals interact with the ion cloud. The development of a pulsed cold beam source is discussed as well as suitable methods for determining the ion temperature. A challenging application is to prepare internally cold CH5+ for spectroscopy or chemistry. New experimental results for hydrogen abstraction in collisions with slow H atoms are reported at energies of a few meV. For evaluating these measurements and for predicting effective rate coefficients at lower energies, the kinematic conditions of the slow neutral beam-ion trap arrangement have been analyzed in detail. The potential of cooling ions such as protonated methane or H3+ with slow energy selected H atoms is briefly mentioned. An interesting process is the formation of weakly bound ions such as H4+ or CH6+ via radiative or ternary association. Such ions are ideal candidates for preparing the corresponding collision complexes very close (microeV) to the dissociation continuum using infrared transitions.

Effects of molecular rotation in low-energy electron collisions of H3+.

Measurements on the energetic structure of the dissociative recombination rate coefficient in the millielectronvolt range are described for H3+ ions produced in the lowest rotational levels by collisional cooling and stored as a fast beam in the magnetic storage ring TSR (Test Storage Ring). The observed resonant structure is consistent with that found previously at the storage ring facility CRYRING in Stockholm, Sweden; theoretical predictions yield good agreement on the overall size of the rate coefficient, but do not reproduce the detailed structure. First studies on the nuclear spin symmetry influencing the lowest level populations show a small effect different from the theoretical predictions. Heating processes in the residual gas and by collisions with energetic electrons, as well as cooling owing to interaction with cold electrons, were observed in long-time storage experiments, using the low-energy dissociative recombination rate coefficient as a probe, and their consistency with the recent cold H3+ measurements is discussed.

Action spectroscopy of H3+ and D2H+ using overtone excitation.

The H3+ ion and its deuterated isotopologues H2D+, D2H+ and D3+ play an important role in astrophysical and laboratory plasmas. The main challenge for understanding these ions and their interaction at low temperatures are state-specific experiments. This requires manipulation and a simple but efficient in situ characterization of their low-lying rotational states. In this contribution we report measurements of near infrared (NIR) absorption spectra. Required high sensitivity is achieved by combining liquid nitrogen cooled plasma with the technique of NIR cavity ringdown absorption spectroscopy. The measured transition frequencies are then used for exciting cold ions stored in a low-temperature 22-pole radiofrequency ion trap. Absorption of a photon by the stored ion is detected by using the laser-induced reactions technique. As a monitor reaction, the endothermic proton (or deuteron) transfer to Ar is used in our studies. Since the formed ArH+ (or ArD+) ions are detected with near unit efficiency, the stored ions can be characterized very efficiently, even if there are just a few of them.

Dynamical constraints and nuclear spin caused restrictions in HmD+ collision systems.

This contribution summarizes a variety of results and ongoing activities, which contribute to our understanding of inelastic and reactive collisions involving hydrogen ions. In an overview of our present theoretical knowledge of various HmD+ collision systems (m + n < or = 5), it is emphasized that although the required potential energy surfaces are well characterized, no detailed treatments of the collision dynamics are available to date, especially at the low energies required for astrochemistry. Instead of treating state-to-state dynamics with state of the art methods, predictions are still based on: (i) simple thermodynamical arguments, (ii) crude reaction models such as H atom exchange or proton jump, or (iii) statistical considerations used for describing processes proceeding via long-lived or strongly interacting collision complexes. A central problem is to properly account for the consequences of the fact that H and D are fermions and bosons, respectively. In the experimental and results sections, it is emphasized that although a variety of innovative techniques are available and have been used for measuring rate coefficients, cross-sections or state-to-state transition probabilities, the definitive experiments are still pending. In the centre of this contribution are our activities on various m + n = 5 systems. We report a few selected additional results for collisions of hydrogen ions with p-H2, o-H2, HD, D2 or well-defined mixtures of these neutrals. Most of the recent experiments are based on temperature variable multipole ion traps and their combination with pulsed gas inlets, molecular beams, laser probing or electron beams. Based on the state-specific model calculations, it is concluded that for completely understanding the gas phase formation and destruction of HmDn+ in a trap, an in situ characterization of all the experimental parameters is required with unprecedented accuracy. Finally, the need to understand the hydrogen chemistry relevant for dense pre-stellar cores is discussed.

Charging mechanisms of trapped element-selectively excited nanoparticles exposed to soft x rays.

Charging mechanisms of trapped, element-selectively excited free SiO2 nanoparticles by soft x rays are reported. The absolute charge state of the particles is measured and the electron emission probability is derived. Changes in electron emission processes as a function of photon energy and particle charge are obtained from the charging current. This allows us to distinguish contributions from primary photoelectrons, Auger electrons, and secondary electrons. Processes leading to no change in charge state after absorption of x-ray photons are identified. O 1s-excited SiO2 particles of low charge state indicate that the charging current follows the inner-shell absorption. In contrast, highly charged SiO2 nanoparticles are efficiently charged by resonant Auger processes, whereas direct photoemission and normal Auger processes do not contribute to changes in particle charge. These results are discussed in terms of an electrostatic model.

High-resolution dissociative recombination of cold H3+and first evidence for nuclear spin effects.

The energy-resolved rate coefficient for the dissociative recombination (DR) of H(3)(+) with slow electrons has been measured by the storage-ring method using an ion beam produced from a radiofrequency multipole ion trap, employing buffer-gas cooling at 13 K. The electron energy spread of the merged-beams measurement is reduced to 500 microeV by using a cryogenic GaAs photocathode. This and a previous cold- measurement jointly confirm the capability of ion storage rings, with suitable ion sources, to store and investigate H(3)(+) in the two lowest, (J,G) = (1,1) and (1,0) rotational states prevailing also in cold interstellar matter. The use of para-H(2) in the ion source, expected to enhance para-H(3)(+) in the stored ion beam, is found to increase the DR rate coefficient at meV electron energies.

Probing the structure of CH5+ ions and deuterated variants via collisions.

Numerous recent calculations have provided a rather detailed picture how the protonated methane, CHS+, really may look like at very low temperatures; however, there is not yet any experiment, providing information on the correlation of a structure of this fluxional ion with a state to state transition induced by a photon or a collision. Various efforts in spectroscopy and mass spectrometry have contributed important pieces to the puzzle but there are no real final conclusions, e.g. infrared spectra in the region of the C-H stretching vibration are waiting for assignment since several years. This contribution reviews and discusses the potential and the limitations of a variety of detailed collision experiments for learning more about protonated methane and deuterated variants, either via creation, modification or destruction of CH5+. There has been a controversial discussion about an experiment which seemed to indicate that deuteron transfer from CD4+ to CH4 can create stable isotopomers with chemically distinguishable hydrogen atoms, CH3-HD+. Detailed integral and differential cross sections measured with sophisticated ion beam techniques revealed interesting dynamics; but, unfortunately, CH5+ formation is certainly more complicated than just a simple proton transfer into a stable isomer. In collisions of CH4+ with CH4 or CD4, there is significant scrambling and one would need to use differential scattering selection for getting ions produced exclusively via a specific mechanism. There have been several low temperature ion trap studies leading to CH5+, e.g., simply via radiative association of CH3+ with H2 or via hydrogen abstraction in CH4(+) + H2 collisions. Very interesting and in some cases unforeseen observations have been made by using deuterated variants in low temperature collisions. A general conclusion is that H-D exchange is not only influenced by the differences in zero point energies but that symmetry selection rules can significantly restrict the scrambling. For example, conservation of nuclear spin may allow one to synthesize specific CD3H2+ ions with a local ortho hydrogen rotator via radiative association. Cold trapped CH5+ ions have been probed by collisions with HD. Despite the high sensitivity of the trapping technique, no H-D exchange could be observed at all while a few isotopic equivalents of CH7+ grow via radiative association. Finally, our most recent activities are briefly mentioned, probing cold CHR+ ions via collisions with slow H or D atoms. This survey ends with a conclusion and an outlook. It is very sure that all traditional methods of collisional probing are unable to provide evidence for different CH5+ isomers. If, however, spectroscopy, low temperature collision dynamics, multi-electrode traps and supersonic or effusive beams are combined in a suitable way, one may succeed in probing single states of unperturbed cold ions at low temperatures.

Temperature variable ion trap studies of C3Hn+ with H2 and HD.

Hydrogenation and deuteration of C3+, C3H+, C3H2+ in collisions with H2 and HD has been studied from room temperature down to 10 K using a 22-pole ion trap. Although exothermic, hydrogenation of C3+ is rather slow at room temperature but becomes faster with decreasing temperature. In addition to the increasing lifetime of the collision complex this behavior may be caused by the floppy structure of C3+ and the freezing of soft bending modes below 50 K. For C3(+) + HD it has been shown that production of C3D+ is slightly favored over C3H+ formation. The controversy over which products are really formed in C3H(+) + H2 collisions and deuterated variants has a long history. Previous and new ion trap results prove that formation of C3H2(+) + H is not endothermic but rather fast, in contradiction to erroneous conclusions from flow tube experiments and ab initio calculations. In addition the reaction shows a complicated isotope dependence, most probably caused by the influence of zero point energies in entrance and exit transition states. For example hydrogen abstraction with HD is faster than with H2 while radiative association is slower. The most surprising result has been obtained for C3H(+) + HD. Here C3HD+ formation is over one hundred times faster than C3H2+. In addition to the details of the potential energy surface it may be that in this case an H-HD exchange reaction takes place via an open-chain propargyl cation intermediate (H2CCCH+). Reactions of C3H2+ and C3H3+ with H2 are very slow but, due to the unique sensitivity of the trapping technique, significant rate coefficients have been determined. The presented results are of fundamental importance for understanding the energetics, structures and reaction dynamics of the deuterated variant of the C3Hn+ collision system. They indicate that the previous quantum chemical calculations are not accurate enough for understanding the low energy behavior of the Cn,Hm+ reaction systems. The laboratory experiments are of essential relevance for the carbon chemistry of dense interstellar clouds, both for formation of small hydrocarbons and deuterium fractionation.

Action spectroscopy and temperature diagnostics of H+ 3 by chemical probing.

Infrared absorption spectroscopy of few hundred H+(3) ions trapped in a 22-pole ion trap is presented using chemical probing as a sensitive detection technique down to the single ion level. By exciting selected overtone transitions of the (v(1)=0,v(2) (l)=3(1))<--(0,0(0)) vibrational band using an external cavity diode laser an accurate diagnostics measurement of the effective translational and rotational temperatures of the trapped ions was performed. The absolute accuracy of the measured transition frequencies was improved by a factor of four compared to previous plasma spectroscopy measurements using velocity modulation [Ventrudo et al., J. Chem. Phys. 100, 6263 (1994)]. The observed buffer gas cooling conditions in the ion trap indicate how to cool trapped H+(3) ions into the lowest ortho and para rotational states. Future experiments will utilize such an internally cold ion ensemble for state-selected dissociative recombination experiments at the heavy ion storage ring Test Storage Ring (TSR).

Four-dimensional imaging and quantitative reconstruction to analyse complex spatiotemporal processes in live cells.

Live-cell imaging technology using fluorescent proteins (green fluorescent protein and its homologues) has revolutionized the study of cellular dynamics. But tools that can quantitatively analyse complex spatiotemporal processes in live cells remain lacking. Here we describe a new technique--fast multi-colour four-dimensional imaging combined with automated and quantitative time-space reconstruction--to fill this gap. As a proof of principle, we apply this method to study the re-formation of the nuclear envelope in live cells. Four-dimensional imaging of three spectrally distinct fluorescent proteins is used to simultaneously visualize three different cellular compartments at high speed and with high spatial resolution. The highly complex data, comprising several thousand images from a single cell, were quantitatively reconstructed in time-space by software developed in-house. This analysis reveals quantitative and qualitative insights into the highly ordered topology of nuclear envelope formation, in correlation with chromatin expansion - results that would have been impossible to achieve by manual inspection alone. Our new technique will greatly facilitate study of the highly ordered dynamic architecture of eukaryotic cells.

Analysis of fast dynamic processes in living cells: high-resolution and high-speed dual-color imaging combined with automated image analysis.

The generation of spectral mutants of the green fluorescent protein (GFP) set the stage for multiple-color imaging in living cells. However, the use of this technique has been limited by a spectral overlap of the available GFP mutants and/or by insufficient resolution in both time and space. Using a new setup for dual-color imaging, we demonstrate here the visualization of small, fast moving vesicular structures with a high time resolution. Two GFP-fusion proteins were generated: human chromogranin B, a secretory granule matrix protein, and phogrin, a secretory granule membrane protein. They were tagged with enhanced yellow fluorescent protein (EYFP) and enhanced cyan fluorescent protein (ECFP), respectively. Both fusion proteins were cotransfected in Vero cells, a cell line from green monkey kidney. EYFP and ECFP were excited sequentially at high time rates using a monochromator. Charged coupled device (CCD)-based image acquisition resulted in 5-8 dual-color images per second, with a resolution sufficient to detect transport vesicles in mammalian cells. Under these conditions, a fully automated time-resolved analysis of the movement of color-coded objects was achieved. The development of specialized software permitted the analysis of the extent of colocalization between the two differentially labeled sets of cellular structures over time. This technical advance will provide an important tool to study the dynamic interactions of subcellular structures in living cells.

Equivalence of the fly orthodenticle gene and the human OTX genes in embryonic brain development of Drosophila.

Members of the orthodenticle gene family are essential for embryonic brain development in animals as diverse as insects and mammals. In Drosophila, mutational inactivation of the orthodenticle gene results in deletions in anterior parts of the embryonic brain and in defects in the ventral nerve cord. In the mouse, targeted elimination of the homologous Otx2 or Otx1 genes causes defects in forebrain and/or midbrain development. To determine the morphogenetic properties and the extent of evolutionary conservation of the orthodenticle gene family in embryonic brain development, genetic rescue experiments were carried out in Drosophila. Ubiquitous overexpression of the orthodenticle gene rescues both the brain defects and the ventral nerve cord defects in orthodenticle mutant embryos; morphology and nervous system-specific gene expression are restored. Two different time windows exist for the rescue of the brain versus the ventral nerve cord. Ubiquitous overexpression of the human OTX1 or OTX2 genes also rescues the brain and ventral nerve cord phenotypes in orthodenticle mutant embryos; in the brain, the efficiency of morphological rescue is lower than that obtained with overexpression of orthodenticle. Overexpression of either orthodenticle or the human OTX gene homologs in the wild-type embryo results in ectopic neural structures. The rescue of highly complex brain structures in Drosophila by either fly or human orthodenticle gene homologs indicates that these genes are interchangeable between vertebrates and invertebrates and provides further evidence for an evolutionarily conserved role of the orthodenticle gene family in brain development.