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1.
Chem Commun (Camb) ; 50(29): 3859-61, 2014 Apr 14.
Article in English | MEDLINE | ID: mdl-24589884

ABSTRACT

The optical response, binding parameters, and duplex DNA binding mode of water-soluble kinetically inert tetranuclear metallomacrocycles can all be controlled by judicious selection of ancillary ligands.


Subject(s)
DNA/chemistry , Ligands , Macrocyclic Compounds/chemistry , Metals/chemistry , DNA/metabolism , Spectrometry, Fluorescence , Viscosity , Water/chemistry
2.
Chem Commun (Camb) ; (20): 2947-9, 2009 May 28.
Article in English | MEDLINE | ID: mdl-19436919

ABSTRACT

A self-assembled, kinetically locked, tetranuclear metallomacrocycle interacts with duplex DNA with an affinity that is several orders of magnitude higher than its mononuclear building blocks, producing large-scale bending of the duplex structure.


Subject(s)
DNA/metabolism , Macrocyclic Compounds/metabolism , Metals/metabolism , Binding Sites , DNA/chemistry , Luminescence , Macrocyclic Compounds/chemistry , Metals/chemistry , Nucleic Acid Conformation
3.
Inorg Chem ; 43(19): 6015-23, 2004 Sep 20.
Article in English | MEDLINE | ID: mdl-15360251

ABSTRACT

Heterobinuclear copper(II)-zinc(II) complexes and their homobinuclear dicopper(II) counterparts (1-4) of two asymmetric ligands (H2L1 and H2L2), based on 2-aminocyclopent-1-ene-1-dithiocarboxylate, are reported. The ligands are capable of providing both donor set and coordination number asymmetry in tandem. Metal centers in these complexes are connected by a micro-alkoxo and a bridging pyrazolate moiety, as confirmed by X-ray structure analyses of 1, 3, and 4. The Cu(1) site in the dicopper complex (1) is square planar and so are the copper sites in the Cu-Zn complexes 3 and 4. The pentacoordinated Zn sites in the latter complexes have distorted TBP geometry (tau = 0.74), while the corresponding Cu site in 1 has a highly distorted square pyramidal structure (tau = 0.54). The Cu...Zn separations in 3 and 4 are 3.3782 and 3.3403 angstroms, respectively, while the Cu...Cu distance in 1 is 3.3687 angstroms. The dicopper complexes are EPR silent at 77 K, in which the copper(II) centers are coupled by strong antiferromagnetic coupling (J = ca. -290 cm(-1)) as confirmed by variable-temperature (4-300 K) magnetic measurements. These compounds (1 and 2) undergo two one-electron reductions and a single step two-electron oxidation at ca. -0.26, -1.40, and 1.0 V vs Ag/AgCl reference, respectively, as indicated by cyclic and differential pulse voltammetry done at subambient temperatures. EPR spectra of 3 and 4 display axial anisotropy at 77 K with the gperpendicular region being split into multiple lines due to N-superhyperfine coupling (AN = 15.3 x 10(-4) cm(-1)). The observed trend in the spin-Hamiltonian parameters, gparallel > gperpendicular > 2.04 and |Aperpendicular| << |Aparallel| approximately (120-150) x 10(-4) cm(-1), indicates a d(x2-y2)-based ground state with tetragonal site symmetry for the Cu(II) center in these molecules.

4.
Inorg Chem ; 42(25): 8439-45, 2003 Dec 15.
Article in English | MEDLINE | ID: mdl-14658897

ABSTRACT

Three new flexidentate 5-substituted salicylaldimino Schiff base ligands (L1-OH-L3-OH) based on 1-(2-aminoethyl)piperazine (X=H, L1-OH; X=NO2, L2-OH; and X=Br, L3-OH) and their nickel(II) complexes (1a, 1b, 2, and 3) have been reported. The piperazinyl arm of these ligands can in principle have both boat and chair conformations that allow the ligands to bind the Ni(II) center in an ambidentate manner, forming square-planar and/or octahedral complexes. The nature of substitution in the salicylaldehyde aromatic ring and the type of associated anion in the complexes have profound influences on the coordination geometry of the isolated products. With the parent ligand L1-OH, the product obtained is either a planar red compound [Ni(L1-O)]+, isolated as tetraphenylborate salt (1a), or an octahedral green compound [Ni(L1-NH)(H2O)3](2+), isolated with sulfate anion (1b); both have been crystallographically characterized. In aqueous solution, both these planar (S=0) and octahedral (S=1) forms are in equilibrium that has been followed in the temperature range 298-338 K by 1H NMR technique using the protocol of Evans's method. The large exothermicity of the equilibrium process [Ni(L1-O)]+ + 3H2O + H+<=>[Ni(L1-NH)(H2O)3](2+) (DeltaH degrees=-46 +/- 0.2 kJ mol(-1) and DeltaS degrees=-133 +/- 5 J K(-1) mol(-1)) reflects formation of three new Ni-OH2 bonds in going from planar to the octahedral species. With the 5-nitro derivative ligand L2-OH, the sole product is an octahedral compound 2, isolated as a sulfate salt while with the bromo derivative ligand L3-OH, the exclusive product is a planar molecule 3 with associated tetraphenylborate anion. Both 2 and 3 have been structurally characterized by X-ray diffraction analysis.

5.
Inorg Chem ; 42(22): 7189-99, 2003 Nov 03.
Article in English | MEDLINE | ID: mdl-14577788

ABSTRACT

Nickel(II) complexes of three new heterodonor ligands (HL(1), H(2)L(2), and H(3)L(3)) based on 2-aminocyclopent-1-ene-1-dithiocarboxylate have been synthesized, and their crystallographic characterizations are reported. With the pentacoordinating ligands HL(1) and H(3)L(3), the products obtained (1 and 2) are both mononuclear square planar compounds in which one of the pyrazolyl arms of ligand HL(1) and the bridgehead alkoxy oxygen of H(3)L(3) are staying away from coordination in 1 and 2, respectively. The saturated three carbon alkanyl chain in the ligand H(3)L(3) provides enough flexibility to generate tetrahedral distortion (dihedral angle, 22.7 degrees ) in the planarity of 2. Compound 1 displays paramagnetic line-broadening in its (1)H NMR spectrum due to oligomerization in solution. With the unsymmetrical binucleating ligand H(2)L(2), two mixed-spin homodinuclear complexes (3 and 4) have been synthesized using pyrazole and 2-mercaptopyridine as ancillary mu(2)-bridging ligands. Both these complexes have square planar low-spin and spin-triplet nickel(II) centers which display both coordination number and donor set asymmetry in tandem. The compounds have been characterized by (1)H NMR, electronic spectroscopy, and electrochemical studies.

6.
Inorg Chem ; 42(5): 1508-17, 2003 Mar 10.
Article in English | MEDLINE | ID: mdl-12611517

ABSTRACT

The tridentate dithiocarbazate-based Schiff base ligands H(2)L (S-methyl-3-((5-R-2-hydroxyphenyl)methyl)dithiocarbazate, R = NO(2), L = L(2); R = Br, L = L(3)) react with [VO(acac)(2)] in the presence of imidazole derivatives as coligands to form oxovanadium(IV) and cis-dioxovanadium(V) complexes. With benzimidazole and N-methylimidazole, the products are oxovanadium(IV) complexes, viz. [VOL(3)(BzIm)].0.5CH(3)CN (1a) and [VOL(N-MeIm)(2)] (L = L(3), 1b; L = L(2), 1c), respectively. In both 1a,b, the O and S donor atoms of the tridentate ligand are cis to the terminal oxo group (in the "equatorial" plane) and mutually trans, but the N donor atom is respectively cis and trans to the oxo atom, as revealed from X-ray crystallography. When imidazole or 4-methylimidazole is used as the ancillary ligand, the products obtained are water-soluble cis-dioxovanadium(V) complexes [VO(2)L(R'-ImH)] (L = L(3) and L(2), R' = H and Me, 2a-d). These compounds have zigzag chain structures in the solid state as confirmed by X-ray crystallographic investigations of 2a,d, involving an alternating array of LVO(2)(-) species and the imidazolium counterions held together by Coulombic interactions and strong hydrogen bonding. Complexes 2a-d are stable in water or methanol. In aprotic solvents, viz. CH(3)CN, DMF, or DMSO, however, they undergo photochemical transformation when exposed to visible light. The putative product is a mixed-oxidation divanadium(IV/V) species obtained by photoinduced reduction as established by EPR, electronic spectroscopy, and dynamic (1)H NMR experiments.

7.
Inorg Chem ; 41(21): 5555-60, 2002 Oct 21.
Article in English | MEDLINE | ID: mdl-12377053

ABSTRACT

S-Methyl 3-((2-hydroxyphenyl)methyl)dithiocarbazate (H(2)L(1)) and its bromo derivative (H(2)L(2)), which are traditionally biprotic tridentate (ONS) ligands, behave in an unprecedented manner when allowed to react with [VO(acac)(2)] under an oxidative environment in acetonitrile-water medium containing a catalytic amount of alkali metal ion. The products obtained are oxovanadium(V) compounds [VOL(L(cyclic))] (L = L(1), 1a, and L(2), 1b) that contain one molecule of ligand which undergoes metal-induced cyclization to form a thiadiazole ring. Compound 1a crystallizes in the triclinic space group P(-)1 with a = 9.1830(9) A, b = 9.4165(12) A, c = 12.700(2) A, alpha = 100.988(8)(o), beta = 100.195(7)(o), gamma = 78.774(8)(o), V = 1046.3(2) A(3), and Z = 2. With cobalt(III), however, the products [CoL(HL)].H(2)O (L = L(1), 2a, and L(2), 2b) have hydrogen-bonded dimeric structures with each ligand virtually carrying 1.5 units of negative charge as confirmed by X-ray crystal structure analysis of 2a. It also crystallizes in triclinic space group P(-)1 with a = 12.0842(8) A, b = 13.5251(9) A, c = 14.1960(10) A, alpha = 78.122(6)(o), beta = 73.888(6)(o), gamma = 78.255(6)(o), V = 2154.7(3) A(3), and Z = 4. In solution, 2a is a symmetric molecule as indicated by (1)H NMR, involving a characteristic hydrogen-bonded O-H-O broad feature in the downfield (at 14.5 ppm) connecting both monoprotonated (LH(-)) and deprotonated (L(2-)) forms of the ligand--a situation somewhat analogous to the classic H-F-H case as observed in bifluoride ion.

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