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1.
J Chem Phys ; 160(3)2024 Jan 21.
Article in English | MEDLINE | ID: mdl-38226824

ABSTRACT

Under decompression, disordered solids undergo an unjamming transition where they become under-coordinated and lose their structural rigidity. The mechanical and vibrational properties of these materials have been an object of theoretical, numerical, and experimental research for decades. In the study of low-coordination solids, understanding the behavior and physical interpretation of observables that diverge near the transition is of particular importance. Several such quantities are length scales (ξ or l) that characterize the size of excitations, the decay of spatial correlations, the response to perturbations, or the effect of physical constraints in the boundary or bulk of the material. Additionally, the spatial and sample-to-sample fluctuations of macroscopic observables such as contact statistics or elastic moduli diverge approaching unjamming. Here, we discuss important connections between all of these quantities and present numerical results that characterize the scaling properties of sample-to-sample contact and shear modulus fluctuations in ensembles of low-coordination disordered sphere packings and spring networks. Overall, we highlight three distinct scaling regimes and two crossovers in the disorder quantifiers χz and χµ as functions of system size N and proximity to unjamming δz. As we discuss, χX relates to the standard deviation σX of the sample-to-sample distribution of the quantity X (e.g., excess coordination δz or shear modulus µ) for an ensemble of systems. Importantly, χµ has been linked to experimentally accessible quantities that pertain to sound attenuation and the density of vibrational states in glasses. We investigate similarities and differences in the behaviors of χz and χµ near the transition and discuss the implications of our findings on current literature, unifying findings in previous studies.

2.
Soft Matter ; 18(7): 1540-1553, 2022 Feb 16.
Article in English | MEDLINE | ID: mdl-35107478

ABSTRACT

In amorphous solids subject to shear or thermal excitation, so-called structural indicators have been developed that predict locations of future plasticity or particle rearrangements. An open question is whether similar tools can be used in dense active materials, but a challenge is that under most circumstances, active systems do not possess well-defined solid reference configurations. We develop a computational model for a dense active crowd attracted to a point of interest, which does permit a mechanically stable reference state in the limit of infinitely persistent motion. Previous work on a similar system suggested that the collective motion of crowds could be predicted by inverting a matrix of time-averaged two-particle correlation functions. Seeking a first-principles understanding of this result, we demonstrate that this active matter system maps directly onto a granular packing in the presence of an external potential, and extend an existing structural indicator based on linear response to predict plasticity in the presence of noisy dynamics. We find that the strong pressure gradient necessitated by the directed activity, as well as a self-generated free boundary, strongly impact the linear response of the system. In low-pressure regions the linear-response-based indicator is predictive, but it does not work well in the high-pressure interior of our active packings. Our findings motivate and inform future work that could better formulate structure-dynamics predictions in systems with strong pressure gradients.

3.
Phys Rev E ; 104(4-1): 044905, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34781437

ABSTRACT

The origin of several emergent mechanical and dynamical properties of structural glasses is often attributed to populations of localized structural instabilities, coined quasilocalized modes (QLMs). Under a restricted set of circumstances, glassy QLMs can be revealed by analyzing computer glasses' vibrational spectra in the harmonic approximation. However, this analysis has limitations due to system-size effects and hybridization processes with low-energy phononic excitations (plane waves) that are omnipresent in elastic solids. Here we overcome these limitations by exploring the spectrum of a linear operator defined on the space of particle interactions (bonds) in a disordered material. We find that this bond-force-response operator offers a different interpretation of QLMs in glasses and cleanly recovers some of their important statistical and structural features. The analysis presented here reveals the dependence of the number density (per frequency) and spatial extent of QLMs on material preparation protocol (annealing). Finally, we discuss future research directions and possible extensions of this work.

4.
Phys Rev Lett ; 126(1): 015501, 2021 Jan 08.
Article in English | MEDLINE | ID: mdl-33480780

ABSTRACT

Plastic deformation in amorphous solids is known to be carried by stress-induced localized rearrangements of a few tens of particles, accompanied by the conversion of elastic energy to heat. Despite their central role in determining how glasses yield and break, the search for a simple and generally applicable definition of the precursors of those plastic rearrangements-the so-called shear transformation zones (STZs)-is still ongoing. Here we present a simple definition of STZs-based solely on the harmonic approximation of a glass's energy. We explain why and demonstrate directly that our proposed definition of plasticity carriers in amorphous solids is more broadly applicable compared to anharmonic definitions put forward previously. Finally, we offer an open-source library that analyzes low-lying STZs in computer glasses and in laboratory materials such as dense colloidal suspensions for which the harmonic approximation is accessible. Our results constitute a physically motivated methodological advancement towards characterizing mechanical disorder in glasses, and understanding how they yield.

5.
Phys Rev E ; 101(6-1): 062605, 2020 Jun.
Article in English | MEDLINE | ID: mdl-32688602

ABSTRACT

Collective behaviors displayed by groups of social animals are observed frequently in nature. Understanding and predicting the behavior of complex biological systems is dependent on developing effective descriptions and models. While collective animal systems are characteristically nonequilibrium, we can employ concepts from equilibrium statistical mechanics to motivate the measurement of material-like properties in laboratory animal aggregates. Here, we present results from a new set of experiments that utilize high speed footage of two-dimensional schooling events, particle tracking, and projected static and dynamic light fields to observe and control the behavior of negatively phototaxic fish schools (Hemigrammus bleheri). First, we use static light fields consisting of dark circular regions to produce visual stimuli that confine the schools to a range of areas. We find that schools have a maximum density which is independent of group size, and that a swim pressurelike quantity, Π increases linearly with number density, suggesting that unperturbed schools exist on an isotherm. Next, we use dynamic light fields where the radius of the dark region shrinks linearly with time to compress the schools. We find that an effective temperature parameter depends on the compression time and our results are thus consistent with the school having a constant heat flux. These findings further evidence the utility of effective thermodynamic descriptions of nonequilibrium systems in collective animal behavior.


Subject(s)
Behavior, Animal , Characiformes , Laboratories , Animals , Hot Temperature , Swimming , Thermodynamics
6.
Sci Rep ; 8(1): 7587, 2018 05 15.
Article in English | MEDLINE | ID: mdl-29765115

ABSTRACT

Throughout the animal kingdom, animals frequently benefit from living in groups. Models of collective behaviour show that simple local interactions are sufficient to generate group morphologies found in nature (swarms, flocks and mills). However, individuals also interact with the complex noisy environment in which they live. In this work, we experimentally investigate the group performance in navigating a noisy light gradient of two unrelated freshwater species: golden shiners (Notemigonuscrysoleucas) and rummy nose tetra (Hemigrammus bleheri). We find that tetras outperform shiners due to their innate individual ability to sense the environmental gradient. Using numerical simulations, we examine how group performance depends on the relative weight of social and environmental information. Our results highlight the importance of balancing of social and environmental information to promote optimal group morphologies and performance.


Subject(s)
Characidae/physiology , Cyprinidae/physiology , Animals , Behavior, Animal , Models, Biological , Social Behavior
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