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1.
Anal Chem ; 87(15): 7738-45, 2015 Aug 04.
Article in English | MEDLINE | ID: mdl-26121008

ABSTRACT

The alarming rate at which antibiotic resistance is occurring in human pathogens causes a pressing need for improved diagnostic technologies aimed at rapid detection and point-of-care testing to support quick decision making regarding antibiotic therapy and patient management. Here, we report the successful development of an electrochemical biosensor to detect bla(NDM), the gene encoding the emerging New Delhi metallo-beta-lactamase, using label-free electrochemical impedance spectroscopy (EIS). The presence of this gene is of critical concern because organisms harboring bla(NDM) tend to be multiresistant, leaving very few treatment options. For the EIS assay, we used a bla(NDM)-specific PNA probe that was designed by applying a new approach that combines in silico probe design and fluorescence-based DNA microarray validation with electrochemical testing on gold screen-printed electrodes. The assay was successfully demonstrated for synthetic targets (LOD = 10 nM), PCR products (LOD = 100 pM), and direct, amplification-free detection from a bla(NDM)-harboring plasmid. The biosensor's specificity, preanalytical requirements, and performance under ambient conditions were demonstrated and successfully proved its suitability for further point-of-care test development.


Subject(s)
Bacterial Typing Techniques/methods , Electrochemical Techniques , Enterobacteriaceae Infections/microbiology , Enterobacteriaceae/enzymology , Enterobacteriaceae/genetics , beta-Lactamases/genetics , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Carbapenems/pharmacology , Drug Resistance, Multiple, Bacterial/genetics , Enterobacteriaceae/classification , Enterobacteriaceae/drug effects , Enterobacteriaceae Infections/drug therapy , Humans , Protein Array Analysis , Time Factors
2.
J Infect ; 69(2): 134-44, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24780765

ABSTRACT

OBJECTIVES: This prospective study was performed to determine the incidence, risk factors, severity and outcomes of community-associated Clostridium difficile infection (CA-CDI) in the SE of Scotland. METHODS: All patients (335) diagnosed with laboratory confirmed CDI in the city of Edinburgh, East Lothian and Midlothian regions of Scotland between August 2010 and July 2011 were followed up for one year after diagnosis. Clinical details and laboratory markers were recorded. Stool samples were tested for C. difficile, other bacterial pathogens and norovirus. Molecular epidemiology of C. difficile isolates was studied by PCR-ribotyping. RESULTS: Of the total 335 confirmed CDI cases, PCR-ribotype 001 was the commonest (14.1%), followed by PCR-ribotypes 078 (12.9%) and 015 (11.7%), respectively. CA-CDI represented 12.5% of the cases. In these, PCR-ribotype 078 was the commonest (19.0%), followed by PCR-ribotypes 014/020 (16.7%), PCR-ribotype 015 (14.3% and PCR-ribotype 001 (11.9%). A lower Charlson co-morbidity index and a lower age was observed in the CA-CDI group as was total number of different antibiotic classes whereas age >75 was more common in the HA-CDI group. On multivariable analysis presence of PCR-ribotype 078 was significantly associated with community acquisition (p = 0.006) whereas a greater proportion of immunosuppressed patients and those on antibiotics 8 weeks preceding diagnosis (p = 0.035 and p = 0.005 respectively) were found among HA-CDI cases. Charlson co-morbidity index, number of different antibiotics given in the eight weeks preceding onset, severity of infection and rural residence were not significantly different between the two groups. CONCLUSION: This study demonstrates that patients with CA-CDI may also present with severe infection, are less likely to receive antibiotics prior to CDI, more likely to be younger in age and have a greater proportion of PCR-ribotype 078 compared with CDI acquired in a hospital setting. Hence a high level of vigilance must be maintained to detect CDI cases which present in the community without the traditional predisposing factors.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Clostridioides difficile/isolation & purification , Clostridium Infections/epidemiology , Coinfection/epidemiology , Community-Acquired Infections/epidemiology , Adolescent , Adult , Aged , Child , Child, Preschool , Clostridioides difficile/drug effects , Clostridium Infections/drug therapy , Coinfection/drug therapy , Coinfection/microbiology , Community-Acquired Infections/drug therapy , Community-Acquired Infections/microbiology , Female , Humans , Incidence , Male , Middle Aged , Multivariate Analysis , Polymerase Chain Reaction , Prospective Studies , Ribotyping , Risk Factors , Scotland/epidemiology , Treatment Outcome , Young Adult
3.
Int Orthop ; 38(1): 163-7, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24013458

ABSTRACT

PURPOSE: Our unit has used a selective screening policy for methicillin-resistant Staphylococcus aureus (MRSA) colonisation using standard chromogenic growth media, based upon risk stratification. The aim of this study was to examine the effectiveness of this selective screening policy. METHODS: A cohort of 429 patients was assessed for their risk status for MRSA colonisation using both rapid polymerase chain reaction (PCR) swabs and traditional culture and sensitivity analysis. The sensitivity, specificity, positive predictive values and negative predictive values of the traditional selective approach were calculated compared to universal rapid screening. RESULTS: One hundred eighteen patients were considered high risk and would traditionally be further screened with standard culture of swabs. The prevalence of MRSA was 15/429 (3.5%). The sensitivity of selective screening was 53% identifying eight of 15 cases. The false-negative rate was therefore 47% and seven would have been missed. PCR results were available within four to six hours, whereas culture results were only available at 24 hours for the media showing no growth and not until 72 hours for positive MRSA cases. CONCLUSIONS: We now advocate universal screening prior to, or on admission, using this rapid PCR test, as we consider this identifies MRSA colonisation more effectively and facilitates "ring-fencing" of orthopaedic beds.


Subject(s)
Hospital Units , Mass Screening/methods , Mass Screening/standards , Methicillin-Resistant Staphylococcus aureus , Staphylococcal Infections/diagnosis , Cohort Studies , Cost-Benefit Analysis , DNA, Bacterial/genetics , False Negative Reactions , False Positive Reactions , Female , Humans , Male , Methicillin-Resistant Staphylococcus aureus/genetics , Methicillin-Resistant Staphylococcus aureus/isolation & purification , Microbiological Techniques/economics , Orthopedics , Polymerase Chain Reaction/economics , Prevalence , Sensitivity and Specificity , Staphylococcal Infections/epidemiology , Staphylococcal Infections/microbiology
6.
Telemed J E Health ; 17(8): 656-61, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21780941

ABSTRACT

Mobile communication technologies are employed in many diverse areas of healthcare delivery to provide improved quality and efficiency of communication and facilitate increased rapidity of data or information transfer. Mobile phones enable healthcare professionals to possess a portable platform from which to provide many healthcare-related applications and are a popular means to directly communicate with colleagues and patients. As involvement of mobile communication technology in healthcare delivery continues to rapidly expand, there are also important considerations of relevance to patient safety and security as a result. Here, we review the previous evidence of reported clinical risks associated with mobile communication technology, such as electromagnetic interference, confidentiality and data security, distraction/noise, infection control, and cross contamination. In conclusion, although mobile phones provide much putative potential improvement to healthcare delivery, further evaluation and research are required to both inform and protect health professionals and users of such technology in the healthcare environment and provide the evidence base to support the provision of clear and comprehensive guidelines.


Subject(s)
Cell Phone/standards , Confidentiality/standards , Cross Infection/etiology , Electromagnetic Fields/adverse effects , Telemedicine/standards , Cell Phone/trends , Cross Infection/prevention & control , Humans , Infection Control/methods , Infection Control/standards , Information Dissemination/methods , Noise/adverse effects , Patient Safety/standards , Physician-Patient Relations , Telemedicine/methods , Telemedicine/trends
10.
Ann R Coll Surg Engl ; 92(4): 311-5, 2010 May.
Article in English | MEDLINE | ID: mdl-20385046

ABSTRACT

INTRODUCTION: Methicillin-resistant Staphylococcus aureus (MRSA)-related hospital-acquired infection (HAI) in surgical patients is associated with high morbidity, mortality and financial cost. The identification and characterisation of populations of patients who are at high risk of developing MRSA infection or colonisation could inform the design of more effective strategies to prevent HAIs and reduce transmission of MRSA. PATIENTS AND METHODS: An analysis of historical discharge data for the whole of 2005 (7145 surgical in-patients) was performed, for all patients admitted to general surgery at the Royal Infirmary of Edinburgh. Analysis specifically focused on MRSA laboratory data and coding data for patient demographics, medical co-morbidities, and progress of in-patient stay. RESULTS: A total of 134 (1.88%) individual patients with colonisation or infection by MRSA were identified from indicated laboratory testing. Univariate analysis identified a significant association of concurrent MRSA-positive status with patients aged over 60 years (P < 0.01), a duration of inpatient stay > 7 days (P < 0.01), presence of a malignant neoplasm (P < 0.01), circulatory disease (P < 0.01), respiratory disease (P < 0.01), central nervous system disease (P < 0.01), renal failure (P < 0.01), and concurrent admission to ITU/HDU (P < 0.01). Multivariate analysis suggested MRSA colonisation or infection was strongest in those with co-morbid malignancy (P < 0.0001) or admission to ITU/HDU (P < 0.0001). CONCLUSIONS: This large observational study has identified cancer patients as a UK surgical patient subpopulation which is at significantly higher risk of colonisation by MRSA. These data could inform the development of focused hospital in-patient screening protocols and provide a means to stratify patient risk.


Subject(s)
Cross Infection/prevention & control , Methicillin-Resistant Staphylococcus aureus/isolation & purification , Staphylococcal Infections/prevention & control , Adolescent , Adult , Aged , Aged, 80 and over , Critical Care , Cross Infection/complications , Cross Infection/transmission , Epidemiologic Methods , Female , Humans , Length of Stay , Male , Mass Screening/organization & administration , Middle Aged , Neoplasms/complications , Patient Selection , Staphylococcal Infections/complications , Staphylococcal Infections/transmission , Young Adult
12.
J Med Microbiol ; 50(12): 1030-1038, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11761186

ABSTRACT

Yersinia enterocolitica is a bacterium capable of growth at 4 degrees C in donated blood and has been responsible for many deaths following transfusion. Interaction of Y. enterocolitica with blood cells is of interest in understanding the mechanisms of survival and growth in blood. The closely related organism Y. pseudotuberculosis is known to invade platelets and cause platelet aggregation by a mechanism that involves expression of the chromosomal inv gene. Yersinia isolates were made to express green fluorescent protein (GFP) and their interaction with platelets was studied by flow cytometry, enterocolitica did not cause platelet aggregation or activation, not even when grown at 22 degrees C to maximise inv expression. Attachment of Y. enterocolitica O:9 to platelets occurred with virulence plasmid-bearing (pYV+) strains grown at 37 degrees C but not with pYV- strains nor with strains grown at 22 degrees C. Y. pseudotuberculosis containing inv did cause platelet activation and aggregation when grown at 22 degrees C, as has been shown before, but also showed enhanced attachment to platelets when grown at 37 degrees C. Electron microscopy studies confirmed that inv-expressing Y. pseudotuberculosis invaded platelets but Y. enterocolitica attached only to the outer surface of platelets. Interaction of Y. enterocolitica O:9 with platelets provided a modest protection against bacterial killing by human serum. Interaction of Y. enterocolitica O:9 with platelets does not lead to platelet invasion or activation, and is mediated through plasmid-coded factors, not inv.


Subject(s)
Adhesins, Bacterial , Blood Platelets/microbiology , Yersinia enterocolitica/physiology , Yersinia enterocolitica/pathogenicity , Yersinia pseudotuberculosis/physiology , Bacterial Adhesion , Bacterial Proteins/genetics , Blood Donors , Blood Platelets/ultrastructure , Cells, Cultured , Flow Cytometry , Fluorescence , Humans , Microscopy, Electron , Plasmids , Platelet Aggregation , Platelet Membrane Glycoproteins/metabolism , Temperature , Virulence , Yersinia Infections , Yersinia enterocolitica/ultrastructure
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