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1.
J Chem Theory Comput ; 20(14): 5820-5828, 2024 Jul 23.
Article in English | MEDLINE | ID: mdl-38984946

ABSTRACT

Energy transfer processes among units of light-harvesting homo-oligomers impact the efficiency of these materials as components in organic optoelectronic devices such as solar cells. Perylene diimide (PDI), a prototypical dye, features exceptional light absorption and highly tunable optical and electronic properties. These properties can be modulated by varying the number of PDI units and linkers between them. Herein, atomistic nonadiabatic excited state molecular dynamics is used to explore the energy transfer during the internal conversion of acetylene and diacetylene bridged dimeric and trimeric PDIs. Our simulations reveal a significant impact of the bridge type on the transient exciton localization/delocalization between units of PDI dimers. After electronic relaxation, larger exciton delocalization occurs in the PDI dimer connected by the diacetylene bridge with respect to the one connected by the shorter acetylene bridge. These changes can be rationalized by the Frenkel exciton model. We outline a technique for deriving parameters for this model using inputs provided by nonadiabatic dynamics simulations. Frenkel exciton description reveals an interplay between the relative strengths of the diagonal and off-diagonal disorders. Moreover, atomistic simulations and the Frenkel exciton model of the PDI trimer systems corroborate in detail the localization properties of the exciton on the molecular units during the internal conversion to the lowest-energy excited state when the units become effectively decoupled. Overall, atomistic nonadiabatic simulations in combination with the Frenkel exciton model can serve as a predictive framework for analyzing and predicting desired exciton traps in PDI-based oligomers designed for organic electronics and photonic devices.

2.
J Chem Phys ; 160(19)2024 May 21.
Article in English | MEDLINE | ID: mdl-38767255

ABSTRACT

The time-periodic modulation of a temperature gradient can alter the heat transport properties of a physical system. Oscillating thermal gradients give rise to behaviors such as modified thermal conductivity and controllable time-delayed energy storage that are not present in a system with static temperatures. Here, we examine how the heat transport properties of a molecular lattice model are affected by an oscillating temperature gradient. We use analytical analysis and molecular dynamics simulations to investigate the vibrational heat flow in a molecular lattice system consisting of a chain of particles connected to two heat baths at different temperatures, where the temperature difference between baths is oscillating in time. We derive expressions for heat currents in this system using a stochastic energetics framework and a nonequilibrium Green's function approach that is modified to treat the nonstationary average energy fluxes. We find that emergent energy storage, energy release, and thermal conductance mechanisms induced by the temperature oscillations can be controlled by varying the frequency, waveform, and amplitude of the oscillating gradient. The developed theoretical approach provides a general framework to describe how vibrational heat transmission through a molecular lattice is affected by temperature gradient oscillations.

3.
Phys Rev E ; 108(2-1): 024148, 2023 Aug.
Article in English | MEDLINE | ID: mdl-37723696

ABSTRACT

Energy transport is a fundamental physical process that plays a prominent role in the function and performance of myriad systems and technologies. Recent experimental measurements have shown that subjecting a macroscale system to a time-periodic temperature gradient can increase thermal conductivity in comparison to a static temperature gradient. Here, we theoretically examine this mechanism in a nanoscale model by applying a stochastic Langevin framework to describe the energy transport properties of a particle connecting two heat baths with different temperatures, where the temperature difference between baths is oscillating in time. Analytical expressions for the energy flux of each heat bath and for the system itself are derived for the case of a free particle and a particle in a harmonic potential. We find that dynamical effects in the energy flux induced by temperature oscillations give rise to complex energy transport hysteresis effects. The presented results suggest that applying time-periodic temperature modulations is a potential route to control energy storage and release in molecular devices and nanosystems.

4.
J Chem Theory Comput ; 19(16): 5356-5368, 2023 Aug 22.
Article in English | MEDLINE | ID: mdl-37506288

ABSTRACT

We present NEXMD version 2.0, the second release of the NEXMD (Nonadiabatic EXcited-state Molecular Dynamics) software package. Across a variety of new features, NEXMD v2.0 incorporates new implementations of two hybrid quantum-classical dynamics methods, namely, Ehrenfest dynamics (EHR) and the Ab-Initio Multiple Cloning sampling technique for Multiconfigurational Ehrenfest quantum dynamics (MCE-AIMC or simply AIMC), which are alternative options to the previously implemented trajectory surface hopping (TSH) method. To illustrate these methodologies, we outline a direct comparison of these three hybrid quantum-classical dynamics methods as implemented in the same NEXMD framework, discussing their weaknesses and strengths, using the modeled photodynamics of a polyphenylene ethylene dendrimer building block as a representative example. We also describe the expanded normal-mode analysis and constraints for both the ground and excited states, newly implemented in the NEXMD v2.0 framework, which allow for a deeper analysis of the main vibrational motions involved in vibronic dynamics. Overall, NEXMD v2.0 expands the range of applications of NEXMD to a larger variety of multichromophore organic molecules and photophysical processes involving quantum coherences and persistent couplings between electronic excited states and nuclear velocity.

5.
J Phys Chem Lett ; 14(26): 6001-6008, 2023 Jul 06.
Article in English | MEDLINE | ID: mdl-37347959

ABSTRACT

Dinoflagellate luciferin bioluminescence is unique since it does not rely on decarboxylation but is poorly understood compared to that of firefly, bacteria, and coelenterata luciferins. Here we computationally investigate possible protonation states, stereoisomers, a chemical mechanism, and the dynamics of the bioluminescence intermediate that is responsible for chemiexcitation. Using semiempirical dynamics, time-dependent density functional theory static calculations, and a correlation diagram, we find that the intermediate's functional group that is likely responsible for chemiexcitation is a 4-member ring, a dioxetanol, that undergoes [2π + 2π] cycloreversion and the biolumiphore is the cleaved structure. The simulated emission spectra and luciferase-dependent absorbance spectra agree with the experimental data, giving support to our proposed mechanism and biolumiphore. We also compute circular dichroism spectra of the intermediate's four stereoisomers to guide future experiments in differentiating them.


Subject(s)
Dinoflagellida , Firefly Luciferin , Firefly Luciferin/chemistry , Luciferins , Stereoisomerism , Luminescent Measurements
6.
Pediatr Dent ; 26(1): 17-22, 2004.
Article in English | MEDLINE | ID: mdl-15080353

ABSTRACT

PURPOSE: The purpose of this study was to assess the periodicity of the recall examination and frequency and most often used technique for cleaning children's teeth. The resulting data were compared to current scientific evidence and recommendations to determine the appropriateness of practices by board-certified pediatric dentists. METHODS: A 28-item questionnaire was mailed to the 1,034 members of the College of Diplomates of the American Board of Pediatric Dentistry residing in the United States. This report describes data pertaining to recall appointment periodicity, frequency and method of cleaning children's teeth, use of auxiliaries in prophylaxis, and instruction in oral hygiene. RESULTS: Six hundred twenty-nine surveys were returned, tabulated, and analyzed. Only 1% of dentists did not have an active recall program, 95% used a 6-month recall interval, and the remaining 5% had an interval ranging from 3 to 18 months. Hygienists were employed in 62% of pediatric dentistry practices. Pumice/rubber cup prophylaxis was employed routinely at recall by 67% of respondents; 24% reported the use of toothbrush and dental floss for cleaning; the other 9% reported no routine method for prophylaxis. The average fee for a pumice/rubber cup prophylaxis was dollar 42.55, and dollar 40.31 for a toothbrush prophylaxis. One hundred percent of pediatric dentists reported providing oral hygiene instruction for their patients. The instruction was directed to both parent and child in 97% of practices, child only in 2% of practices, and the parent only in 1% of practices. CONCLUSIONS: Recall intervals were not based on specific criteria related to individual patient needs. The majority of pediatric dentists employed the pumice/rubber cup prophylaxis method for cleaning children's teeth.


Subject(s)
Dental Prophylaxis , Pediatric Dentistry , Practice Patterns, Dentists' , Appointments and Schedules , Child , Dental Care for Children/statistics & numerical data , Dental Devices, Home Care/statistics & numerical data , Dental Hygienists/statistics & numerical data , Dental Prophylaxis/economics , Dental Prophylaxis/methods , Dental Prophylaxis/statistics & numerical data , Fees, Dental , Humans , Oral Hygiene , Parents/education , Patient Education as Topic , Pediatric Dentistry/statistics & numerical data , Practice Patterns, Dentists'/statistics & numerical data , Time Factors , Toothbrushing/statistics & numerical data , United States
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