ABSTRACT
Pulsed slit-jet high resolution (up to 0.0009 cm(-1) FWHM) infrared diode laser spectra of CF(3)Br, with natural isotopic abundance, were obtained in the region around 9.2 microm at the rotational temperature of about 50 K. In addition, diode laser spectra at reduced temperature (200 K) were recorded. We present here the rovibrational analysis of the nu(1) fundamental in the range 1075-1090 cm(-1). The fine structure of many P(J) and R(J) clusters has been well resolved for the first time. The assignment of rovibrational transitions has been accomplished up to K = 27, J = 63 for CFBr and K = 33, J = 62 for CFBr. A total of 636 (CFBr) and 880 (CFBr) lines were used in the final fit and a very accurate set of molecular constants, including the quartic centrifugal distortion coefficients for the v(1) = 1 state of both the bromine isotopologues, was obtained. In addition, spectral features belonging to the nu(1) + nu(6)-nu(6) hot band were unambiguously identified and a set of spectroscopic parameters were determined.
ABSTRACT
The vapor-phase infrared spectrum of monofluoroacetonitrile (CH(2)FCN) has been recorded at high resolution in the nu(4) band region (1363-1398 cm(-1)) using a tunable diode laser spectrometer. A detailed assignment of the rotational structure of the expected a-/b-hybrid band has been made for a-type transitions with K(a)=19, J=61. The b-type transitions were too weak to be observed. Upper state spectroscopic constants including the sextic terms have been obtained from a set of unperturbed data employing the Watson A-reduced Hamiltonian in the I(r) representation. A number of perturbed transitions have been accounted for, including b- and c-type Coriolis resonances and anharmonic resonances between nu(4) and the nearby levels nu(5)+nu(12) and nu(11)+nu(12). The vibrational energies of these perturbing levels have been obtained from the reanalysis of the low-resolution infrared spectrum. Rotational constants and the band origin of the perturbers along with the interaction parameters with the v(4)=1 state have also been determined. Copyright 2001 Academic Press.
ABSTRACT
The diode laser spectrum of cis-1,2-CHF=CHF has been measured and analyzed in the nu4 fundamental region near 1016 cm(-1). This vibration of symmetry species A1 corresponds to the C-F symmetric stretching motion and gives rise to a strong b-type band. The rovibrational analysis, extended to the P, Q, and R branches, led to the identification of 2800 lines with J < or = 62, Ka < or = 18, Kc < or = 62. The assigned transitions free of major resonance contributions, fitted using Watson's A-reduction Hamiltonian in the Ir representation, yielded a set of spectroscopic parameters up to the quartic coefficients for the V4 = 1 state. Several perturbation effects occur throughout the band, mainly caused by the first-order c-type Coriolis interaction with the nu5 + nu11, vibrational state. Even though no transitions to the perturbing level were observed, the band orign and the rotational constants for the perturber were determined from a dyad model which includes the Coriolis interaction term.
Subject(s)
Ethylenes/chemistry , Spectrophotometry, Infrared/methods , Statistics as TopicABSTRACT
The field of proteomics involves the combined application of advanced separation techniques, mass spectrometry, and bioinformatics tools to characterize proteins in complex biological mixtures. Here we report the identification of nine proteins from the human pituitary proteome, using the proteomics approach. The pituitary proteins were separated by two-dimensional electrophoresis, and were visualized by silver staining. The proteins of interest were subjected to in-gel digestion with trypsin, and the masses of the resulting peptides were determined by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry. This tryptic mass map was used to identify the proteins through a search of a protein-sequence database. The identified proteins include important hormones, and enzymes with various catalytic activities. These proteins will be used to construct a two-dimensional reference database of the human pituitary. This database will be employed to study changes in the pituitary proteome that are associated with the formation of pituitary tumors.
Subject(s)
Mass Spectrometry , Pituitary Gland/chemistry , Proteins/analysis , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Databases, Factual , Electrophoresis, Gel, Two-Dimensional , Female , Gene Expression , Glutathione Transferase/analysis , Glutathione Transferase/isolation & purification , Glyceraldehyde-3-Phosphate Dehydrogenases/analysis , Glyceraldehyde-3-Phosphate Dehydrogenases/isolation & purification , Hemoglobins/analysis , Hemoglobins/isolation & purification , Humans , Middle Aged , Peptide Fragments/analysis , Peptide Fragments/isolation & purification , Pituitary Hormones/analysis , Pituitary Hormones/isolation & purification , Pro-Opiomelanocortin/analysis , Pro-Opiomelanocortin/isolation & purification , Proteins/isolation & purification , Silver Staining , Thiolester Hydrolases/analysis , Thiolester Hydrolases/isolation & purification , Ubiquitin ThiolesteraseABSTRACT
cis-1-Chloro-2-fluoroethylene was synthesized, and the gas-phase infrared spectrum was investigated in the nu(4) band region between 1321-1350 cm(-1), at a resolution of about 0.002 cm(-1), employing a tunable diode-laser spectrometer. This vibration of symmetry species A' gives rise to an a/b-hybrid band, even though our analysis pointed out that the intensity of the a-type component is predominant. Most of the J and K structure was resolved in different subbranches, and the rovibrational analysis led to the assignment of about 1900 a-type lines with J = 71 and K(a) = 20 for the (35)Cl isotopic species. The nu(4) fundamental is locally perturbed by a weak Coriolis resonance and some local crossings were found; the 3nu(12) state seems to be the most likely interacting level. Using Watson's A-reduction Hamiltonian in the I(r) representation, a set of spectroscopic parameters for the v(4) = 1 state was obtained. Copyright 1999 Academic Press.
ABSTRACT
Muramyl peptides are fragments of peptidoglycan from the cell walls of bacteria. Because of their unique chemistry, the immune system recognizes that muramyl peptides are products of bacteria, and it responds by becoming activated to resist infection. This resistance to infection is nonspecific, and extends to unrelated species of bacteria, fungi, and viruses. A key mechanism of the resistance to infection is activation of macrophages. Macrophage activation results in increased production of microbicidal oxygen radicals like superoxide and peroxide, and in increased secretion of inflammatory cytokines like interleukin-1beta and tumor necrosis factor-alpha. These cytokines, besides activating neutrophils, B lymphocytes, and T lymphocytes, act on the central nervous system to induce physiological responses like fever and sleep. These physiological responses also aid in combating infection. Muramyl peptides also activate macrophages and other cells of the immune system to kill cancer cells. Muramyl peptides and similar agents will become more important as therapeutic agents in the future, due to increasing resistance of microbes to antibiotics, and increasing numbers of patients with immunodeficiencies.
Subject(s)
Acetylmuramyl-Alanyl-Isoglutamine/analogs & derivatives , Macrophages/drug effects , Monokines/drug effects , Muramic Acids/pharmacology , Peptidoglycan/chemistry , Sleep/drug effects , Acetylmuramyl-Alanyl-Isoglutamine/pharmacology , Animals , Carbohydrate Sequence , Humans , Immune System/cytology , Immune System/drug effects , Molecular Sequence DataABSTRACT
The spectra of CH2F37Cl (95% isotopically pure sample) have been recorded at high resolution with a tunable diode laser spectrometer in the regions 979-1030 and 1108-1136 cm-1. The spectral analysis allowed us to assign about 2000 lines (J = 61, Ka = 26) of the nu9 band (nu0 = 1001.9360 cm-1), which, besides the expected c-type component, shows a more intense Coriolis-induced parallel component deriving its intensity from mixing with the nu4 vibrational state. In addition, the assignments of the nu4 band (nu0 = 1067.7138 cm-1), previously investigated, have been extended to higher Ka values and about 1300 new lines (J = 69, 17 = Ka = 26) have been identified. The nu4 and nu9 bands have been fitted simultaneously to account for the first-order a- and b-type Coriolis coupling; interaction constants and excited state parameters up to the sextic terms have been obtained using Watson's A-reduction Hamiltonian in the Ir representation. Copyright 1999 Academic Press.
ABSTRACT
The two mid-infrared bands of the CF2&dbond;CHF molecule, nu5 centered at 1172.673 cm-1 and nu6 + nu9 at 1155.105 cm-1, were measured on a tunable diode laser spectrometer with a resolution near the Doppler limit. These vibrations of A' species give rise to a/b hybrid bands, even though our analysis has pointed out that the intensity of the a-type component is predominant. Most of the J and K structure has been resolved in different subbranches, and the rovibrational analysis led to the assignment of about 1400 (J = 60, Ka = 22, Kc = 60) and 90 (J = 56, Ka = 5, Kc = 56) lines of the nu5 and nu6 + nu9 bands, respectively. Using Watson's A-reduction Hamiltonian in the Ir representation, a set of accurate spectroscopic constants for the upper states has been derived from transitions free of major resonance effects. The rotational structure of the nu5 vibration also exhibits effects of Coriolis perturbation by a state identified as nu7 + nu11. Parameters for the perturber were determined from the interaction effects near the observed crossings, using a dyad model including first-order b-Coriolis interaction. Copyright 1998 Academic Press.
ABSTRACT
The structures of major muramyl peptides derived from peptidoglycan of the oral pathogen Streptococcus sanguis were determined and the biological activity of the peptides was tested in vitro on human monocytes. The muramyl peptides, produced by muramidase digestion of the purified peptidoglycan, were separated by reversed-phase high-performance liquid chromatography, either in their native form or after reduction with sodium borohydride. Chemical structures of the peptides were elucidated by a combination of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry, amino acid analysis, post-source decay analysis and Edman sequencing. The study revealed two distinct monomers: N-acetylglucosaminyl-N-acetylmuramyl-Ala-iGln-Lys(Ala-Ala) (1), where the Ala-Ala is connected to the epsilon-amino group of lysine, and N-acetylglucosaminyl-N-acetylmuramyl-Ala-iGln-Lys(Ala-Ala)-Ala-Ala (2), where an additional dialanyl residue is attached to the lysine alpha-carboxyl group. Two sets of higher oligomers (di-, tri- and tetramers), related structurally to monomers 1 or 2 were also detected. In these oligomers, the monomeric subunits are linked together by Ala-Ala-Ala bridges. The native muramyl peptides primed human monocytes in vitro for the increased production of the microbicidal superoxide radical.
Subject(s)
Muramic Acids/chemistry , Peptidoglycan/chemistry , Streptococcus sanguis/chemistry , Amino Acid Sequence , Biological Assay , Carbohydrate Sequence , Chromatography, High Pressure Liquid , Humans , In Vitro Techniques , Molecular Structure , Monocytes/drug effects , Monocytes/metabolism , Muramic Acids/isolation & purification , Muramic Acids/pharmacology , Peptidoglycan/isolation & purification , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Streptococcus sanguis/pathogenicity , Superoxides/metabolismABSTRACT
Diode laser spectra of CH2 F37 Cl (95% isotopically pure sample) have been recorded in the 9.4 µm region characterized by the nu4 fundamental. The spectral analysis allowed the assignment of more than 3700 transitions with J = 92 and Ka = 16 of the expected a /b -hybrid structure. The nu4 fundamental, whose origin is at 1067.7140 cm-1 , mainly interacts through a - and b -type Coriolis coupling with the nu9 fundamental located at lower wavenumbers near 1002 cm-1 . Local effects arising from Fermi resonance with nu5 + nu6 have been observed for the K a ' = 14 level. An effective set of upper state molecular constants was determined by fitting the less perturbed transitions to the Watson's A-reduction Hamiltonian in the Ir representation. Due to the second-order a -type Coriolis resonance, a number of perturbation-allowed transitions of nu9 were observed and assigned near the avoided crossing. Using a suitable program, we experienced a two band system analysis which produced the molecular constants of the v 4 = 1 and v 9 = 1 states along with the interaction parameter. From spectral simulation of nu4 , the |Deltaµa /Deltaµb | dipole moment ratio was estimated to be 1.8 +/- 0.2.
ABSTRACT
The 2nu1 + nu2 + 2nu3 band of ozone, occurring in the 4780 cm-1 region, has been observed for the first time, using a Fourier transform spectrometer, at 0.008 cm-1 resolution and using a large path length pressure product. Assignments of vibration-rotational transitions have been made up to J = 48 and Ka = 9. As a few levels with Ka = 1 or 2 are perturbed, it has been necessary to take into account the Coriolis resonance between the (212) and (141) vibrational states. With the effective Hamiltonian explicitly accounting for the interaction between these two states, the fit on 165 energy levels leads to the rms deviation of 1.9 x 10(-3) cm-1, which is near the experimental accuracy. Line intensities of the 2nu1 + nu2 + 2nu3 band have been measured and calculated. The set of spectroscopic parameters for interacting bands, as well as transition moment constants, is given. A complete list of line positions and intensities, with a cutoff of 1 x 10(-26) cm-1/molecule.cm-2 at 296 K up to J = 65 and Ka = 15, has been generated, which leads to the integrated band intensity Sv (2nu1 + nu2 + 2nu3) = (5.1 +/- 2.0) x 10(-23) cm-1/molecule.cm-2. Copyright 1997Academic Press
ABSTRACT
The infrared spectrum of vinyl fluoride (CH2=CHF) has been investigated in the region 390-590 cm-1 at room temperature and at a resolution of 0.0016 cm-1 using a Fourier transform spectrometer. The rovibrational analysis of the spectral features allowed us to assign about 11 000 lines (J = 60) of the nu9 ab-type band centered at 483.0666 cm-1 and more than 700 lines (J = 40) of the 2nu9 - nu9 ab-type hot band, the bandcenter of which is located at 485.6687 cm-1. The experimental data provided the rotational and centrifugal distortion constants for the vibrational excited states v9 = 1 and 2 employing Watson's A-reduction Hamiltonian in the Ir representation. Moreover, band origins, harmonic frequency, and anharmonicity factor have been obtained from the vibrational analysis of the fundamental and the associated hot band. Copyright 1997Academic Press
ABSTRACT
Fast atom bombardment mass spectrometry plays a continuing and effective role in the rapid and efficient analysis of synthetic peptides. In this article, the basic principles of FAB-MS and FAB-MS/MS are reviewed, and the limitations and pitfalls of the method are discussed. The potential of the technique is illustrated by several selected applications. The molecular weight of a synthetic peptide can be readily and accurately determined by FAB-MS. The sensitivity of the FAB-MS method also makes it extremely useful for the evaluation of the purity of a peptide. FAB-MS/MS allows the elucidation of the primary structure of the target peptide, even in a mixture, and also permits the rapid identification of synthetic side products. Hence, FAB-MS and FAB-MS/MS aid in the unequivocal characterization of synthetic peptides. Furthermore, the information that is gained from the FAB analysis can help to unravel potential problems that may be associated with the synthesis.
Subject(s)
Peptides/chemistry , Spectrometry, Mass, Fast Atom Bombardment/methods , Peptides/chemical synthesisABSTRACT
A computerized pharmacy system dealing with drug distribution, clinical services and administrative services is described. Present systems, implemented for 50% of the institution's beds, are discussed fully. Future applications of the system are outlined.