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1.
Data Brief ; 31: 105708, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32462069

ABSTRACT

Magnetic Resonance Sounding (MRS) measurements are acquired at 16 stations in the Strengbach headwater catchment (Vosges Mountains - France). These data, rendering the vertical distribution of water contents in the subsurface, are used to show their potential in conditioning a hydrological model of the catchment, as described in the article "Magnetic resonance sounding measurements as posterior information to condition hydrological model parameters: Application to a hard-rock headwater catchment" - Journal of Hydrology (2020). Acquisition protocols follow a free induction decay scheme. Data are filtered by applying a band-pass filter at the Larmor frequency. A filter removing the 50 Hz noise is also applied with the exception of data at a Larmor frequency close to the 50 Hz harmonic. The signal envelopes are then fitted by a decaying exponential function over time to estimate the median characteristic relaxation time of each MRS sounding.

2.
Mol Cell Biol ; 30(22): 5348-63, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20855530

ABSTRACT

The precise expression of the N-myc proto-oncogene is essential for normal mammalian development, whereas altered N-myc gene regulation is known to be a determinant factor in tumor formation. Using transgenic mouse embryos, we show that N-myc sequences from kb -8.7 to kb +7.2 are sufficient to reproduce the N-myc embryonic expression profile in developing branchial arches and limb buds. These sequences encompass several regulatory elements dispersed throughout the N-myc locus, including an upstream limb bud enhancer, a downstream somite enhancer, a branchial arch enhancer in the second intron, and a negative regulatory element in the first intron. N-myc expression in the limb buds is under the dominant control of the limb bud enhancer. The expression in the branchial arches necessitates the interplay of three regulatory domains. The branchial arch enhancer cooperates with the somite enhancer region to prevent an inhibitory activity contained in the first intron. The characterization of the branchial arch enhancer has revealed a specific role of the transcription factor GATA3 in the regulation of N-myc expression. Together, these data demonstrate that correct N-myc developmental expression is achieved via cooperation of multiple positive and negative regulatory elements.


Subject(s)
Branchial Region/embryology , Branchial Region/metabolism , GATA3 Transcription Factor/metabolism , Gene Expression Regulation, Developmental , Genes, myc , Proto-Oncogene Proteins c-myc/metabolism , Regulatory Sequences, Nucleic Acid , Animals , Base Sequence , Branchial Region/anatomy & histology , Embryo, Mammalian/anatomy & histology , Embryo, Mammalian/physiology , GATA3 Transcription Factor/genetics , Humans , In Situ Hybridization , Introns , Limb Buds/anatomy & histology , Limb Buds/embryology , Limb Buds/metabolism , Mice , Mice, Transgenic , Molecular Sequence Data , Proto-Oncogene Mas , Proto-Oncogene Proteins c-myc/genetics , Sequence Alignment
4.
Bull Acad Natl Med ; 192(2): 275-8; discussion 278-80, 2008 Feb.
Article in French | MEDLINE | ID: mdl-18819682

ABSTRACT

IRD is a French public scientific and technological institution, jointly overseen by the Ministries of Research and Overseas Cooperation. It has three main vocations: research, evaluation and training It meets these objectives by conducting scientific programs, centered around the relationship between humans and their environment in poor countries, in order to contribute to sustainable development. IRD has a budget of 218,9 millions euros. It employs 2 235 staff including 830 researchers, 1 021 engineers and technicians, and local personnel. Forty-two percent of IRD staff are employed overseas, many technicians originate from poor countries, and IRD research programs involve researchers from many countries. IRD is engaged in several European and international scientific programs, and plays a coordinating role for research institutions and universities working towards third-world development.


Subject(s)
Academies and Institutes/organization & administration , Academies and Institutes/economics , Academies and Institutes/statistics & numerical data , Conservation of Natural Resources , Developing Countries , France , International Cooperation , Social Change
5.
Ground Water ; 44(4): 547-54, 2006.
Article in English | MEDLINE | ID: mdl-16857032

ABSTRACT

The performance of the Magnetic Resonance Sounding (MRS) method applied to the investigation of heterogeneous hard-rock aquifers was studied. It was shown using both numerical modeling and field measurements that MRS could be applied to the investigation of the weathered part of hard-rock aquifers when the product of the free water content multiplied by the thickness of the aquifer is >0.2 (for example, 10-m-thick layer with a 2% water content). Using a currently available one-dimensional MRS system, the method allows the characterization of two-dimensional subsurface structures with acceptable accuracy when the size of the subsurface anomaly is equal to or greater than the MRS loop. However, the fractured part of hard-rock aquifers characterized by low effective porosity (<0.5%) cannot be resolved using currently available MRS equipment. It was found that shallow water in the weathered part of the aquifer may screen MRS signals from deeper water-saturated layers, thus further reducing the possibility of investigating deeper fractured aquifers. A field study using the NUMIS(plus) MRS system developed by IRIS Instruments was carried out on an experimental watershed in southern India. A heterogeneous unconfined aquifer in a gneissic formation was successfully localized, and MRS results were confirmed by drilling shortly after the geophysical study. The top of the aquifer revealed by MRS was found to be in a good agreement with observed static water level measurements in boreholes.


Subject(s)
Magnetic Resonance Spectroscopy/instrumentation , Magnetic Resonance Spectroscopy/methods , Soil/analysis , Water/analysis , Image Processing, Computer-Assisted , India , Models, Theoretical , Porosity , Sound Spectrography
6.
Pediatr Res ; 51(1): 48-56, 2002 Jan.
Article in English | MEDLINE | ID: mdl-11756639

ABSTRACT

Our knowledge on the regulation of the N-myc proto-oncogene expression comes mostly from in vitro studies. Very few in vivo analyses have been performed to identify the regulatory elements involved in N-myc developmental expression. In the present study, we defined DNA regions required for the regulated expression of N-myc during early embryogenesis. We showed that the expression of N-myc driven by the human N-myc sequences previously described to control N-myc expression in appropriate cell types in vitro cannot rescue the mouse N-myc mutant phenotype, suggesting that regulatory elements necessary for N-myc embryonic expression were missing. To identify the regulatory DNA regions involved in N-myc expression, transgenic mouse lines carrying N-myc/lacZ reporter constructs were generated. Beta-galactosidase staining analysis at different stages of gestation revealed that >16 kb of mouse N-myc genomic sequences are required to recapitulate the entire spatiotemporal expression pattern of the endogenous N-myc gene between embryonic d 8.5 and 11.5. This observation supported the notion that the sequences previously identified by in vitro assays were not sufficient to reproduce the N-myc embryonic expression pattern. However, regulatory elements that can direct specific expression in the visceral arches, the limb buds, the CNS, and the dorsal root ganglia are included into the mouse N-myc genomic sequences tested. Altogether, these findings indicated that the regulation of the spatiotemporal expression pattern of N-myc during development necessitates multiple regulatory DNA elements.


Subject(s)
Gene Expression Regulation, Developmental , Genes, myc , Regulatory Sequences, Nucleic Acid , Animals , Female , Mice , Mice, Transgenic , Pregnancy , Proto-Oncogene Mas
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