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1.
PLoS Comput Biol ; 17(4): e1008846, 2021 04.
Article in English | MEDLINE | ID: mdl-33831009

ABSTRACT

The brain is a network system in which excitatory and inhibitory neurons keep activity balanced in the highly non-random connectivity pattern of the microconnectome. It is well known that the relative percentage of inhibitory neurons is much smaller than excitatory neurons in the cortex. So, in general, how inhibitory neurons can keep the balance with the surrounding excitatory neurons is an important question. There is much accumulated knowledge about this fundamental question. This study quantitatively evaluated the relatively higher functional contribution of inhibitory neurons in terms of not only properties of individual neurons, such as firing rate, but also in terms of topological mechanisms and controlling ability on other excitatory neurons. We combined simultaneous electrical recording (~2.5 hours) of ~1000 neurons in vitro, and quantitative evaluation of neuronal interactions including excitatory-inhibitory categorization. This study accurately defined recording brain anatomical targets, such as brain regions and cortical layers, by inter-referring MRI and immunostaining recordings. The interaction networks enabled us to quantify topological influence of individual neurons, in terms of controlling ability to other neurons. Especially, the result indicated that highly influential inhibitory neurons show higher controlling ability of other neurons than excitatory neurons, and are relatively often distributed in deeper layers of the cortex. Furthermore, the neurons having high controlling ability are more effectively limited in number than central nodes of k-cores, and these neurons also participate in more clustered motifs. In summary, this study suggested that the high controlling ability of inhibitory neurons is a key mechanism to keep balance with a large number of other excitatory neurons beyond simple higher firing rate. Application of the selection method of limited important neurons would be also applicable for the ability to effectively and selectively stimulate E/I imbalanced disease states.


Subject(s)
Cerebral Cortex/physiology , Connectome , Neurons/physiology , Action Potentials , Animals , Cerebral Cortex/diagnostic imaging , Female , Inhibitory Postsynaptic Potentials/physiology , Magnetic Resonance Imaging , Mice , Mice, Inbred C57BL
2.
Phys Rev E ; 100(1-1): 012121, 2019 Jul.
Article in English | MEDLINE | ID: mdl-31499780

ABSTRACT

We employ the sorted local transfer entropy (SLTE) to reconstruct the coupling strengths of Ising spin networks with positive and negative couplings (J_{ij}), using only the time-series data of the spins. The SLTE method is model-free in the sense that no knowledge of the underlying dynamics of the spin system is required and is applicable to a broad class of systems. Contrary to the inference of coupling from pairwise transfer entropy, our method can reliably distinguish spin pair interactions with positive and negative couplings. The method is tested for the inverse Ising problem for different J_{ij} distributions and various spin dynamics, including synchronous and asynchronous update Glauber dynamics and Kawasaki exchange dynamics. It is found that the pairwise SLTE is proportional to the pairwise coupling strength to a good extent for all cases studied. In addition, the reconstruction works well for both the equilibrium and nonequilibrium cases of the time-series data. Comparison to other inverse Ising problem approaches using mean-field equations is also discussed.

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