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1.
Psychol Med ; 40(3): 459-65, 2010 Mar.
Article in English | MEDLINE | ID: mdl-19627643

ABSTRACT

BACKGROUND: Previous research indicates that individuals with seasonal depression (SD) do not exhibit the memory biases for negative self-referent information that characterize non-seasonal depression (NSD). The current study extended this work by examining processing of self-referent emotional information concerning potential future events in SD. METHOD: SD and NSD patients, along with never-depressed controls, completed a scenario-based measure of likelihood estimation for future positive and negative events happening either to the self or to another person. RESULTS: SD patients estimated future negative events as more likely to happen to both the self and others, relative to controls. In contrast, in the NSD sample this bias was specific to self-referred material. There were no group differences for positive events. CONCLUSIONS: These data provide further evidence that the self-referent bias for processing negative information that characterizes NSD can be absent in SD, this time in the domain of future event processing.


Subject(s)
Depressive Disorder/psychology , Emotions , Life Change Events , Seasonal Affective Disorder/psychology , Adolescent , Adult , Cognition , Female , Helplessness, Learned , Humans , Likelihood Functions , Male , Middle Aged , Psychiatric Status Rating Scales/statistics & numerical data , Self Concept , Set, Psychology , Young Adult
2.
J Nematol ; 30(1): 108-58, 1998 Mar.
Article in English | MEDLINE | ID: mdl-19274205

ABSTRACT

A list of the deposited type specimens with references, a detailed historical background, importance, and maintenance procedures are given for the type collection of the United States Department of Agriculture Nematode Collection (USDANC). The type specimen section is considered one of the largest and most valuable in existence. It contains 1,430 species mounted and preserved on 5,177 metal and glass slides and 404 vials. Also, a brief description of the other constituent divisions of the collection is given, which, including the type collection, consists of 34,000 permanent slides and vials and 19,500 species entries. The list of deposited types is a type specimen location reference only and should not be used for the status of type species. The generic and specific names are arranged in alphabetical order and are given as indicated by the author(s) or depositor(s) when the types were deposited in the type section of the USDANC. The complete title of the reference is not given for each species, only the author's date, and source and slide number(s). Also, included are authors of designated types other than those of the original type series, e.g. paralectotype, allolectotype, neotype.

3.
AIDS Res Hum Retroviruses ; 13(12): 995-1005, 1997 Aug 10.
Article in English | MEDLINE | ID: mdl-9264286

ABSTRACT

Four sera from Equatorial Guinea (EG) suspected to contain antibody against HIV-1 group O-related viruses were identified on the basis of unusual and differential serologic reactivity in selected commercial assays and Western blot. Degenerate primers, designed from HIV-1 group O published sequences, were used to PCR amplify envelope (env) gene sequences from the suspect EG sera. A complete envelope gene sequence from each serum was determined from the overlapping env gene fragments. Analysis (PHYLIP package of programs) of Env amino acid sequences (translated from nucleotide sequences) indicated that the amino acid sequences obtained from EG sera clustered more closely with HIV Env sequences of group O compared to group M. The amino acid sequences at the octameric tip of the V3 loop were either RIGPLAWY (one isolate), RIGPMAWY (two isolates), or GLGPLAVY (one isolate). The V3 tip tetrameric sequence GPLA is represented only once in the 1995 HIV (Los Alamos) database, but was present in two of our group O-related EG samples. The gp41 immunodominant regions (IDR) protein sequences were identical for sequences from three of the sera, RLLALETLIQNQQLLNLWGCKGR(K)L(I)VCYTSVK(T)W, whereas sequence from the fourth serum contained three changes as noted in parentheses. IDR sequences derived from EG sera were unique compared to those reported for other HIV-1 group O isolate ANT70, VAU, or MVP5180. Antibody in each EG serum directed against the IDR could be detected using synthetic peptides comprising sequences from the ANT70 or MVP5180 IDRs, but were most reactive against the sequences derived from the samples themselves. Little or no serologic reactivity was detected when EG sera were reacted against peptides comprising the IDR of HIV-1 group M (subtype B consensus) or HIV-2 (consensus).


PIP: The genetic variation and epidemiology of HIV-1 group O isolates are of considerable importance to the design of HIV-1 diagnostic and screening assays, especially since current serologic and genetic methods to detect HIV-1 have been developed mainly on the basis of sequences from isolates belonging to HIV-1 group M. The HIV envelope protein, especially the gp41 immunodominant region, plays a major antigenic role in the detection of HIV infection and for discriminating HIV-1 from HIV-2 antibody. This paper reports upon genetic variation and the serologic characterization of env sequences from 4 people living in Equatorial Guinea (EG) who were infected with HIV-1 group O. Selected commercial assays and Western blot were first used to identify the sera, then degenerate primers, designed from HIV-1 group O published sequences, were used to PCR amplify envelope (env) gene sequences. A complete envelope gene sequence from each serum was determined from the overlapping env gene fragments. The env amino acid sequence analysis found the EG sera sequences to be clustered more closely with the HIV env sequences of group O rather than to group M. The amino acid sequences at the octameric tip of the V3 loop were either RIGPLAWY, RIGPMAWY, or GLGPLAVY. Although the V3 tip tetrameric sequence GPLA is represented only once in the 1995 HIV database, it was present in 2 of the group O-related EG samples. The gp41 immunodominant regions (IDR) protein sequences were identical for sequences from 3 of the sera. IDR sequences derived from the EG sera were unique compared to those reported for other HIV-1 group O isolates ANT70, VAU, or MVP5180. Other findings are discussed in detail.


Subject(s)
Gene Products, env/genetics , Genetic Variation , HIV Infections/virology , HIV-1/genetics , Amino Acid Sequence , Equatorial Guinea , Gene Products, env/immunology , HIV Antibodies/blood , HIV Antibodies/immunology , HIV Envelope Protein gp120/genetics , HIV Envelope Protein gp160/genetics , HIV Envelope Protein gp41/genetics , HIV Envelope Protein gp41/immunology , HIV Infections/blood , HIV Infections/immunology , HIV-1/classification , HIV-1/immunology , HIV-1/isolation & purification , Humans , Immunodominant Epitopes/genetics , Immunodominant Epitopes/immunology , Molecular Sequence Data , Peptide Fragments/genetics , Phylogeny , Sequence Analysis, DNA , Serotyping
4.
Leukemia ; 11 Suppl 3: 138-41, 1997 Apr.
Article in English | MEDLINE | ID: mdl-9209322

ABSTRACT

Genetic variation among HIV isolates creates challenges for their detection by serologic and genetic techniques. To characterize the sequence variation and its correlation to serologic diversity of HIV-1 Group O and HIV-2 isolates, samples were identified by differential reactivity in selected commercial and research assays. Analysis of sera from Equatorial Guinea (EG) led to identification of 4 HIV-1 Group O variants. Viral RNA, extracted from these samples was used to PCR amplify overlapping sequences of the entire envelope gene using multiple primer pairs. Sequence analysis indicated that the V3 loop nucleotide and protein sequences aligned more closely with HIVANT70 compared to other Group O sequences. The amino acid sequences at the octameric tip of the V3 loop were RIGPLAWY, RIGPMAWY, or GLGPLAVY. The tetrameric tip GPLA is represented only once in the published 1994 HIV database (Los Alamos) but was present in 2 of 4 of EG samples. The immuno-dominant region (IDR) sequences derived from EG sera were unique in that none of the sequences were completely homologous to other HIV-1 group O variants. Further, the HIV-1 group O sequence variation could be correlated with differential serologic reactivity using IDR peptides. Compared to HIV-1, the sequence information on HIV-2 isolates is relatively limited, though the HIV-2 isolates also show genetic variation similar to HIV-1. To further establish a correlation between the genetic diversity and serologic detection of HIV-2, plasma samples from Western Africa were evaluated. Eight samples were selected based on weak serologic reactivity to env proteins. PCR amplification and sequence analysis of the gag, env V3 loop, and env IDR regions indicated that the samples could be classified as subtypes A (4 samples), B (3 samples) and D (1 sample). Across the subtypes, there was conservation in the IDR region of the sequence WGCAFRQVCHT. This region is absolutely conserved among the majority of currently known HIV-2 and related SIV viruses (1994 HIV database). One subtype B sample had a unique sequence immediately adjacent to the IDR, however, this did not change the serologic detection using a HIV-2 IDR specific monoclonal antibody.


Subject(s)
Genetic Variation , HIV-1/genetics , HIV-1/isolation & purification , HIV-2/genetics , HIV-2/isolation & purification , Acquired Immunodeficiency Syndrome/virology , Africa, Western , Amino Acid Sequence , Blood Donors , Cameroon , Equatorial Guinea , Female , Gene Products, env/chemistry , Genes, env , HIV-1/classification , HIV-2/classification , Humans , Polymerase Chain Reaction , Pregnancy , RNA, Viral/isolation & purification , Serotyping
5.
J Nematol ; 27(3): 312-9, 1995 Sep.
Article in English | MEDLINE | ID: mdl-19277294

ABSTRACT

A stunt nematode, Tylenchorhynchus thermophilus n. sp., is described and illustrated from soil collected around roots of saltgrass (Distichlis spicata) in Death Valley, California. It is distinguished from the similar species, T. ewingi, T. mexicanus, and T. mashoodi, in having a longer female body, longer tail with more annules, and larger phasmids. Physical and chemical analysis of soil from saltgrass roots showed it to consist of 71% sand and possess high salinity (salt content of 0.51%) and a pH of 9.3.

6.
J Nematol ; 27(4): 457-64, 1995 Dec.
Article in English | MEDLINE | ID: mdl-19277312

ABSTRACT

The efficacy of fallow and coastal bermudagrass (Cynodon dactylon) as a rotation crop for control of root-knot nematode (Meloidogyne incognita race 1) and soilborne fungi in okra (Hibiscus esculentus cv. Emerald), squash (Cucurbita pepo cv. Dixie Hybrid), and sweet corn (Zea mays cv. Merit) was evaluated in a 3-year field trial. Numbers of M. incognita in the soil and root-gall indices were greater on okra and squash than sweet corn and declined over the years on vegetable crops following fallow and coastal bermudagrass sod. Fusarium oxysporum and Pythium spp. were isolated most frequently from soil and dying okra plants. Numbers of colony-forming units of soilborne fungi generally declined as the number of years in sod increased, but were not affected by coastal bermudagrass sod. Yields of okra following 2-year and 3-year sod and squash following 2-year sod were greater than those following fallow. Yield of sweet corn was not different following fallow and coastal bermudagrass sod.

7.
J Nematol ; 25(4): 628-41, 1993 Dec.
Article in English | MEDLINE | ID: mdl-19279820

ABSTRACT

Meloidogyne sasseri n. sp. is described and illustrated from American beachgrass (Ammophila breviliffulata) originally collected from Henlopen State Park and Fenwick Island near the Maryland state line in Delaware, United States (6). Its relationship to M. graminis, M. spartinae, and M. californiensis is discussed. Primary distinctive characters of the female perineal pattern were a high to rounded arch with shoulders, widely spaced lateral lines interrupting transverse striations, a sunken vulva and anus, and coarse broken striae around the anal area. Second-stage juvenile body length was 554 mum (470-550), stylet length 14 mum (13-14.5), tail length 93 mum (83-115), tapering to a finely rounded terminus. Male stylet length 20 mum (19-21.5), spicule length 33 mum (30-36). Scanning electron microscope observations provided additional details of perineal patterns and face views of the female, male, and J2 head. Wheat, rice, oat, Ammophila sp., Panicum sp., bermudagrass, zoysiagrass and St. Augustinegrass were tested as hosts. Distribution of the species was the coasts of Delaware and Maryland. The common name "beachgrass root-knot" is proposed for M. sasseri n. sp.

8.
J Nematol ; 24(2): 298-304, 1992 Jun.
Article in English | MEDLINE | ID: mdl-19282999

ABSTRACT

A lesion nematode, Pratylenchus gutierrezi n. sp., collected from the roots of coffee in the Central Plateau of Costa Rica, is described and illustrated. Its relationships to Pratylenchus flakkensis, P. similis, and P. gibbicaudatus, the only other species of the genus having two head annules, males, or spermatheca with sperm, and an annulated tail terminus, is discussed. Other distinctive characters are its posterior vulva (mean of 80%); its prominently rounded stylet knobs, low head, and subcylindrical tail. SEM observations provide additional details of females and males, especially face views, which show for the first time sexual dimorphism.

9.
J Nematol ; 24(4): 533-9, 1992 Dec.
Article in English | MEDLINE | ID: mdl-19283032

ABSTRACT

Nematode population densities and yield of sweet corn and sweet potato as affected by the nematicide fenamiphos, in a sweet corn-sweet potato-vetch cropping system, were determined in a 5-year test (1981-85). Sweet potato was the best host of Meloidogyne incognita of these three crops. Fenamiphos 15G (6.7 kg a.i./ha) incorporated broadcast in the top 15 cm of the soil layer before planting of each crop increased (P

10.
J Nematol ; 24(4S): 648-55, 1992 Dec.
Article in English | MEDLINE | ID: mdl-19283041

ABSTRACT

Tank mixes of a fungicide (metalaxyl) and a nematicide (fenamiphos) with herbicides (isopropalin or pendimethalin) and an insecticide (chlorpyrifos) were applied by soil incorporation or irrigation to control the black shank-root knot complex and weeds on four tobacco cultivars. The disease complex was more severe on cultivars McNair 944, NC-2326, and K-326 than on Speight G-70. The disease complex was reduced (P

11.
J Nematol ; 24(1): 45-53, 1992 Mar.
Article in English | MEDLINE | ID: mdl-19283201

ABSTRACT

An identification key to 29 valid species of Hoplolaimus is given. A compendium of the most important diagnostic characters for use in identification of species is included as a practical alternative and supplement to the key. Diagnosis of Hoplolaimus is emended and lists of species of the genus, their synonymies, species inquirendae, nomina nuda, and species transferred to other genera are given. Hoplolaimus sheri, H. chambus, H. casparus, and H. capensis are recognized as valid species.

12.
J Nematol ; 24(1): 117-26, 1992 Mar.
Article in English | MEDLINE | ID: mdl-19283212

ABSTRACT

In a rapeseed-squash cropping system, Meloidogyne incognita race 1 and M. javanica did not enter, feed, or reproduce in roots of seven rapeseed cultivars. Both nematode species reproduced at low levels on roots of the third crop of rapeseed. Reproduction of M. incognita and M. javanica was high on squash following rapeseed, hairy vetch, and fallow. The application of fenamiphos suppressed (P = 0.05) root-gall indices on squash following rapeseed, hairy vetch, and fallow; and on Dwarf Essex and Cascade rapeseed, but not Bridger and Humus rapeseed in 1987. The incorporation of 30-61 mt/ha green biomass of rapeseed into the soil 6 months after planting did not affect the population densities of Criconemella ornata, M. incognita, M. javanica, Pythium spp., Rhizoctonia solani AG-4; nor did it consistently increase yield of squash. Hairy vetch supported larger numbers of M. incognita and M. javanica than rapeseed cultivars or fallow. Meloidogyne incognita and M. javanica survived in fallow plots in the absence of a host from October to May each year at a level sufficient to warrant the use of a nematicide to manage nematodes on the following susceptible crop.

13.
West J Med ; 155(4): 384-7, 1991 Oct.
Article in English | MEDLINE | ID: mdl-1771876

ABSTRACT

The Karnofsky performance scale is the most widely used method of quantifying cancer patients' ability to function. It has also been used to measure patients' function before and after treatment. Because identifying problems with function is the cornerstone of rehabilitating patients with cancer, we developed a table that relates the functional independence measure with the Karnofsky scale. This approach encourages oncologists to consider inpatient or outpatient rehabilitation services for a broader range of cancer patients. We assessed 70 cancer patients undergoing rehabilitation to identify similarities between the functional independence measure used at our facility and the Karnofsky scale. In activities we considered vital, only 14% of patients were independent with ambulation on admission and, at discharge, 80% were independent or supervised with ambulation. Toilet transfers and bowel and bladder continence improved by the time of discharge. Three months after they were discharged, 28 of the 37 patients had maintained their discharge function level or had improved. Of the original group, 19 had died.


Subject(s)
Neoplasms/rehabilitation , Activities of Daily Living , Aged , Female , Humans , Male , Self Care
14.
J Nematol ; 23(4S): 620-3, 1991 Oct.
Article in English | MEDLINE | ID: mdl-19283173

ABSTRACT

A survey of the nematodes in blackberry (Rubus sp.) rhizospheres was conducted in Arkansas from 1986 to 1989. The state was divided arbitrarily into four quadrants. A total of 134 soil samples was collected, and 150-cm 3 subsamples were assayed for nematodes. Twenty-one species of plant-parasitic nematodes in 11 genera were extracted from the samples. There were differences (P = 0.05) among quadrants of the state in percentage occurrence of the nematodes and in population densities in samples. Xiphinema americanum, Helicotylenchus spp. (H. paraplatyurus, H. platyurus, and H. pseudorobustus), and Pratylenchus spp. (P. vulnus and P. zeae) were found in all quadrants. Xiphinema americanum population density was near 1,000 per 150 cm(3) soil in soil samples from two locations. Other nematodes found in one or more quadrants were Criconemella spp. (C. axeste, C. curvata, C. denoudeni, C. ornata, C. sphaerocephala, and C. xenoplax), Paratrichodorus minor, Tylenchorhynchus claytoni, Hirschmanniella oryzae, Hoplolaimus magnistylus, Scutellonema bradys, and undescribed species of Criconema, Tylenchulus, Xiphinema, and Meloidogyne. Criconemella sphaerocephala and Helicotylenchus platyurus are reported from Arkansas for the first time. Helicotylenchus paraplatyurus is reported from the United States for the first time.

15.
J Nematol ; 22(1): 45-55, 1990 Jan.
Article in English | MEDLINE | ID: mdl-19287688

ABSTRACT

Most morphological characteristics of three populations of a Tylenchulus sp. from peach roots in Alabama, Arkansas, and Georgia did not differ from those of T. palustris paratypes. However, some mature females differed slightly from those of T. palustris paratypes from Florida. These mature females were more swollen in the posterior portion of their bodies, and they possessed digitate postvulval body sections with round rather than conoid termini. These morphological variants had a wide postvulval section core (PVSC), as do T. palustris paratypes; they did not differ from the paratypes in other characteristics. Second-stage juveniles and males were less morphologically variable and were not different from the paratypes. No males were found in populations from Alabama and Georgia. The Tylenchulus sp. from three peach sites was determined to be T. palustris. This is the first report of T. palustris on an economically important crop.

16.
J Nematol ; 21(2): 202-18, 1989 Apr.
Article in English | MEDLINE | ID: mdl-19287599

ABSTRACT

An identification key to 63 species of Pratylenchus is given. A compendium of the most diagnostic characters to be used directly in identification of species is included as a practical alternative and supplement to the key. P. tenuis, P. similis, P. impar, P. ranjani, and P. neocapitatus are recognized as valid species on the basis of study of type specimens. P. hyderabadensis Singh &Gill, 1986 is synonymized with P. dasi Fortuner, 1985. P. hexincisus Taylor &Jenkins, 1957 is confirmed as occasionally having 4 -6 lines in lateral field (instead of 6 only). Comments on the status of some species and a list of species of the genus are given.

18.
J Nematol ; 21(4): 453-61, 1989 Oct.
Article in English | MEDLINE | ID: mdl-19287638

ABSTRACT

Specimens of Meloidogyne marylandi from Bermuda grass and a population from Zoysia grass were examined and compared morphologically by light and electron microscopy. The populations probably are conspecific and the differences noted in the Zoysia population, mainly those of second-stage juveniles (J2) with shorter tails, are considered normal variations rather than representing another form. Scanning electron microscope observations provided additional details of the perineal pattern and head of females and head and lateral fields of second-stage juveniles. Relationship of M. marylandi to closely related species is given. This species is currently known to occur only in Maryland, and populations previously reported from this state as M. graminis are now considered to be M. marylandi. Other reports of M. graminis in the United States now need to be reconfirmed by examination of voucher or recollected specimens.

19.
J Nematol ; 21(4S): 677-81, 1989 Oct.
Article in English | MEDLINE | ID: mdl-19287671

ABSTRACT

A total of 110 species of plant nematodes were found in various habitats in Arkansas. Thirty species from 19 genera are reported here for the first time. Included in the new reports are the known plant pathogens Criconemella onoense, Hirshmanniella oryzae, Longidorus elongatus, and Pratylenchus pratensis.

20.
J Nematol ; 20(3): 381-91, 1988 Jul.
Article in English | MEDLINE | ID: mdl-19290227

ABSTRACT

Heterodera fici is redescribed and illustrated with comparative details and revised measurements and diagnostic characters of the females, males, cysts, and juveniles from Maryland and Pakistan. This species is in the "schachtii group" (cysts lemon shaped, with bullae, and ambifenestrate) but the fenestrae in some cysts, presumab!y young ones, are small and widely spaced, appearing bifenestrate. It is most closely related to H. schachtii, H. glycines, and H. cajani but differs from these species especially in having cysts with small, scattered bullae and weakly developed underbridge; and males with four small nipples on tail tip. Scanning electron microscopy (SEM) observations of the specimens are also presented. The relationship of this species to closely related forms is discussed.

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