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1.
Theor Popul Biol ; 158: 121-138, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38844263

ABSTRACT

Muller's ratchet, in its prototype version, models a haploid, asexual population whose size N is constant over the generations. Slightly deleterious mutations are acquired along the lineages at a constant rate, and individuals carrying less mutations have a selective advantage. The classical variant considers fitness proportional selection, but other fitness schemes are conceivable as well. Inspired by the work of Etheridge et al. (2009) we propose a parameter scaling which fits well to the "near-critical" regime that was in the focus of Etheridge et al. (2009) (and in which the mutation-selection ratio diverges logarithmically as N→∞). Using a Moran model, we investigate the"rule of thumb" given in Etheridge et al. (2009) for the click rate of the "classical ratchet" by putting it into the context of new results on the long-time evolution of the size of the best class of the ratchet with (binary) tournament selection. This variant of Muller's ratchet was introduced in González Casanova et al. (2023), and was analysed there in a subcritical parameter regime. Other than that of the classical ratchet, the size of the best class of the tournament ratchet follows an autonomous dynamics up to the time of its extinction. It turns out that, under a suitable correspondence of the model parameters, this dynamics coincides with the so called Poisson profile approximation of the dynamics of the best class of the classical ratchet.


Subject(s)
Selection, Genetic , Mutation , Genetic Fitness , Models, Genetic , Haploidy , Biological Evolution
2.
medRxiv ; 2021 May 25.
Article in English | MEDLINE | ID: mdl-33758876

ABSTRACT

Preventive and modelling approaches to address the COVID-19 pandemic have been primarily based on the age or occupation, and often disregard the importance of heterogeneity in population contact structure and individual connectivity. To address this gap, we developed models based on Erdos-Rényi and a power law degree distribution that first incorporate the role of heterogeneity and connectivity and then can be expanded to make assumptions about demographic characteristics. Results demonstrate that variations in the number of connections of individuals within a population modify the impact of public health interventions such as lockdown or vaccination approaches. We conclude that the most effective strategy will vary depending on the underlying contact structure of individuals within a population and on timing of the interventions.

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