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1.
In Silico Biol ; 2(2): 111-23, 2002.
Article in English | MEDLINE | ID: mdl-12066836

ABSTRACT

Kinetic modeling of developmental dynamics requires detailed knowledge about genetic and metabolic networks that underlie developmental processes. However, such knowledge is not available for a vast majority of developmental processes. Here, we present an coarse-grained, phenomenological model of periodic pattern formation in multicellular organisms based on cellular oscillators (CO) that can be applied to systems for which little or no molecular data is available. An oscillatory process within cells serves as a developmental clock whose period is tightly regulated by cell-autonomous and non-autonomous mechanisms. A spatial pattern is generated as a result of an initial temporal ordering of the cell oscillators freezing into spatial order as the clocks slow down and stop at different times or phases in their cycles. When applied to vertebrate somitogenesis, the CO model can reproduce the dynamics of periodic gene expression patterns observed in the presomitic mesoderm. Different somite lengths can be generated by altering the period of the oscillation. There is evidence that a CO-type mechanism might also underlie segment formation in certain invertebrates, such as annelids and short germ insects. This suggests that the dynamical principles of sequential segmentation might be equivalent throughout the animal kingdom although most of the genes involved in segment determination differ between distant phyla.


Subject(s)
Biological Clocks/physiology , Body Patterning , Algorithms , Animals , Chickens , Computer Simulation , Drosophila melanogaster/physiology , Embryo, Nonmammalian/anatomy & histology , Embryo, Nonmammalian/physiology , Gene Expression Regulation, Developmental , Morphogenesis , Somites/physiology
2.
Rouxs Arch Dev Biol ; 196(8): 511-521, 1987 Dec.
Article in English | MEDLINE | ID: mdl-28305708

ABSTRACT

Drosophila embryos, exposed to ether between 1 and 4 h after oviposition, develop defects ranging from the complete lack of segmentation to isolated gaps in single segments. Between these extremes are varying extents of incomplete and abnormal segmentation. On the basis of both their temporal and spatial characteristics, five major phenotype classes may be distinguished: headless - unsegmented or incompletely segmented anteriorly; gap - interruptions of segmentation not obviously periodic; alternating segment gaps - interruptions with double segment periodicities; fused segments; and short segments - truncations with single segment periodicities. Many defects resemble known mutant phenotypes. The disturbances in segmentation are predominantly global and frequently accompanied by alterations in segment specification, such that the segments obtained show no resemblance to the normal homologues. These features, together with the distinctive spatiotemporal characteristics of the defects, all point to segmentation as a dynamic process. The regular spacing of the segments and the fact that the entire range of defects is inducible by ether are further consistent with the hypothesis that at least part of the segmentation process may consist of physicochemical reactions coordinated over the whole body. The relationship between our data and data from genetic and other analyses are briefly discussed.

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