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1.
Braz J Microbiol ; 44(1): 97-103, 2013.
Article in English | MEDLINE | ID: mdl-24159289

ABSTRACT

Forty-six bottled water samples representing 16 brands from Dhaka, Bangladesh were tested for the numbers of total coliforms, fecal indicator bacteria (i.e., thermotolerant Escherichia coli and Enterococcus spp.) and potential bacterial pathogens (i.e., Aeromonas hydrophila, Pseudomonas aeruginosa, Salmonella spp., and Shigella spp.). Among the 16 brands tested, 14 (86%), ten (63%) and seven (44%) were positive for total coliforms, E. coil and Enterococcus spp., respectively. Additionally, a further nine (56%), eight (50%), six (37%), and four (25%) brands were PCR positive for A. hydrophila lip, P. aeruginosa ETA, Salmonella spp. invA, and Shigella spp. ipaH genes, respectively. The numbers of bacterial pathogens in bottled water samples ranged from 28 ± 12 to 600 ± 45 (A. hydrophila lip gene), 180 ± 40 to 900 ± 200 (Salmonella spp. invA gene), 180 ± 40 to 1,300 ± 400 (P. aeruginosa ETA gene) genomic units per L of water. Shigella spp. ipaH gene was not quantifiable. Discrepancies were observed in terms of the occurrence of fecal indicators and bacterial pathogens. No correlations were observed between fecal indicators numbers and presence/absence of A. hydrophila lip (p = 0.245), Salmonella spp. invA (p = 0.433), Shigella spp. ipaH gene (p = 0.078), and P. aeruginosa ETA (p = 0.059) genes. Our results suggest that microbiological quality of bottled waters sold in Dhaka, Bangladesh is highly variable. To protect public health, stringent quality control is recommended for the bottled water industry in Bangladesh.

2.
Braz. j. microbiol ; 44(1): 97-103, 2013. tab
Article in English | LILACS | ID: lil-676899

ABSTRACT

Forty-six bottled water samples representing 16 brands from Dhaka, Bangladesh were tested for the numbers of total coliforms, fecal indicator bacteria (i.e., thermotolerant Escherichia coli and Enterococcus spp.) and potential bacterial pathogens (i.e., Aeromonas hydrophil, Pseudomonas aeruginos, Salmonella spp., and Shigella spp.). Among the 16 brands tested, 14 (86%), ten (63%) and seven (44%) were positive for total coliforms, E. coil and Enterococcus spp., respectively. Additionally, a further nine (56%), eight (50%), six (37%), and four (25%) brands were PCR positive for A. hydrophila lip, P. aeruginosa ETA, Salmonella spp. invA, and Shigella spp. ipaH genes, respectively. The numbers of bacterial pathogens in bottled water samples ranged from 28 ± 12 to 600 ± 45 (A. hydrophila lip gene), 180 ± 40 to 900 ± 200 (Salmonella spp. invA gene), 180 ± 40 to 1,300 ± 400 (P. aeruginosa ETA gene) genomic units per L of water. Shigella spp. ipaH gene was not quantifiable. Discrepancies were observed in terms of the occurrence of fecal indicators and bacterial pathogens. No correlations were observed between fecal indicators numbers and presence/absence of A. hydrophila lip (p = 0.245), Salmonella spp. invA (p = 0.433), Shigella spp. ipaH gene (p = 0.078), and P. aeruginosa ETA (p = 0.059) genes. Our results suggest that microbiological quality of bottled waters sold in Dhaka, Bangladesh is highly variable. To protect public health, stringent quality control is recommended for the bottled water industry in Bangladesh.


Subject(s)
Male , Anti-Bacterial Agents , Drinking Water/prevention & control , Coliforms/methods , Coliforms/prevention & control , Enterobacteriaceae Infections , Enterobacteriaceae/isolation & purification , Enterobacteriaceae/pathogenicity , In Vitro Techniques , Polymerase Chain Reaction , Water Pollution , Methods , Virulence , Water Samples
3.
Water Sci Technol ; 66(7): 1527-33, 2012.
Article in English | MEDLINE | ID: mdl-22864440

ABSTRACT

The pollutant impacts of urban stormwater runoff on receiving waters are well documented in research literature. However, it is road surfaces that are commonly identified as the significant pollutant source. This paper presents the outcomes of an extensive program of research into the role of roof surfaces in urban water quality with particular focus on solids, nutrients and organic carbon. The outcomes confirmed that roof surfaces play an important role in influencing the pollutant characteristics of urban stormwater runoff. Pollutant build-up and wash-off characteristics for roads and roof surfaces were found to be appreciably different. The pollutant wash-off characteristics exhibited by roof surfaces show that it influences the first flush phenomenon more significantly than road surfaces. In most urban catchments, as roof surfaces constitute a higher fraction of impervious area compared with road surfaces, it is important that the pollutant generation role of roof surfaces is specifically taken into consideration in stormwater quality mitigation strategies.


Subject(s)
Environmental Monitoring/methods , Rain , Water Movements , Water Pollutants, Chemical/analysis , Water Quality
4.
Int J Food Sci Nutr ; 62(5): 552-7, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21391792

ABSTRACT

Six morphotypes of Centella asiatica designated G(1), G(2), G(3), G(7), G(8) and G(12) were analyzed for carotenoid content, proximate components and selected dietary minerals. Potassium was found to be the major element present in C. asiatica and the content in G(1) and G(3) (6,165.0 ± 125.8 mg/100 g dry weight) was significantly (P < 0.05) higher than all other morphotypes. C. asiatica is more popular for its higher contents of iron and calcium. However, no significant (P>0.05) differences in calcium content among the morphotypes were observed. The imported variety G(7) had significantly higher (P < 0.05) mean content of iron (74.3 ± 34.1 mg/100 g dry weight). The morphotypes G(8) and G(12) contained significantly higher (P < 0.05) content of ß-carotene (77.2 ± 5.1 µg/g fresh weight) and lutein (133.5 ± 10.1 µg/g, fresh weight) respectively. Lutein and ß-carotene levels of these two types were also significantly higher (P < 0.05) than those in the other varieties. The study did not provide any evidence to believe that a given morphotype is superior to another in its overall nutritional value.


Subject(s)
Carotenoids/chemistry , Centella/chemistry , Minerals/chemistry , Food Analysis
5.
J Environ Qual ; 39(5): 1743-50, 2010.
Article in English | MEDLINE | ID: mdl-21043279

ABSTRACT

In this study, the host-sensitivity and host-specificity of JC virus (JCV) and BK virus (BKV) polyomaviruses were evaluated by testing wastewater and fecal samples from nine host groups in Southeast Queensland, Australia. The JCV and BKV polyomaviruses were detected in 63 human wastewater samples collected from primary and secondary effluent, suggesting high sensitivity of these viruses in human wastewater. In the 81 animal wastewater and fecal samples tested, 80 were polymerase chain reaction (PCR) negative for the JCV and BKV markers. Only one sample (out of 81 animal wastewater and fecal samples) from pig wastewater was positive. Nonetheless, the overall host-specificity of these viruses to differentiate between human and animal wastewater and fecal samples was 0.99. To our knowledge, this is the first study in Australia that reports on the high specificity of JCV and BKV polyomaviruses. To evaluate the field application of these viral markers for detecting human fecal pollution, 20 environmental samples were collected from a coastal river. In the 20 samples tested, 15% (3/20) and 70% (14/20) samples exceeded the regulatory guidelines for Escherichia coli and enterococci levels for marine waters. In all, five (25%) samples were PCR positive for JCV and BKV, indicating the presence of human fecal pollution in the coastal river investigated. The results suggest that JCV and BKV detection using PCR could be a useful tool for identifying human-sourced fecal pollution in coastal waters.


Subject(s)
BK Virus/isolation & purification , Feces/virology , JC Virus/isolation & purification , Sewage/virology , Humans , Limit of Detection , Queensland
6.
Water Res ; 44(16): 4662-73, 2010 Sep.
Article in English | MEDLINE | ID: mdl-20891037

ABSTRACT

In this study, the host-specificity and -sensitivity of human- and bovine-specific adenoviruses (HS-AVs and BS-AVs) were evaluated by testing wastewater/fecal samples from various animal species in Southeast, Queensland, Australia. The overall specificity and sensitivity of the HS-AVs marker were 1.0 and 0.78, respectively. These figures for the BS-AVs were 1.0 and 0.73, respectively. Twenty environmental water samples were collected during wet conditions and 20 samples were colleted during dry conditions from the Maroochy Coastal River and tested for the presence of fecal indicator bacteria (FIB), host-specific viral markers, zoonotic bacterial and protozoan pathogens using PCR/qPCR. The concentrations of FIB in water samples collected after wet conditions were generally higher compared to dry conditions. HS-AVs was detected in 20% water samples collected during wet conditions and whereas BS-AVs was detected in both wet (i.e., 10%) and dry (i.e., 10%) conditions. Both Campylobacter jejuni mapA and Salmonella invA genes detected in 10% samples collected during dry conditions. The concentrations of Salmonella invA ranged between 3.5 × 10(2) and 4.3 × 10(2) genomic copies per 500 ml of water Giardia lamblia ß-giardin gene was detected only in one sample (5%) collected during the dry conditions. Weak or significant correlations were observed between FIB with viral markers and zoonotic pathogens. However, during dry conditions, no significant correlations were observed between FIB concentrations with viral markers and zoonotic pathogens. The prevalence of HS-AVs in samples collected from the study river suggests that the quality of water is affected by human fecal pollution and as well as bovine fecal pollution. The results suggest that HS-AVs and BS-AVs detection using PCR could be a useful tool for the identification of human sourced fecal pollution in coastal waters.


Subject(s)
Adenoviridae/isolation & purification , Feces/microbiology , Seawater/virology , Sewage/virology , Water Microbiology , Water Pollutants/isolation & purification , Adenoviridae/genetics , Adenoviridae/pathogenicity , Animals , Australia , Cattle , Cytoskeletal Proteins/genetics , Cytoskeletal Proteins/isolation & purification , Humans , Polymerase Chain Reaction , Protozoan Proteins/genetics , Protozoan Proteins/isolation & purification , Queensland , Risk Assessment , Rivers/microbiology , Rivers/virology , Seawater/microbiology , Sewage/microbiology
7.
Appl Environ Microbiol ; 76(22): 7382-91, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20851954

ABSTRACT

A total of 214 rainwater samples from 82 tanks were collected in urban Southeast Queensland (SEQ) in Australia and analyzed for the presence and numbers of zoonotic bacterial and protozoal pathogens using binary PCR and quantitative PCR (qPCR). Quantitative microbial risk assessment (QMRA) analysis was used to quantify the risk of infection associated with the exposure to potential pathogens from roof-harvested rainwater used as potable or nonpotable water. Of the 214 samples tested, 10.7%, 9.8%, 5.6%, and 0.4% were positive for the Salmonella invA, Giardia lamblia ß-giardin, Legionella pneumophila mip, and Campylobacter jejuni mapA genes, respectively. Cryptosporidium parvum oocyst wall protein (COWP) could not be detected. The estimated numbers of Salmonella, G. lamblia, and L. pneumophila organisms ranged from 6.5 × 10¹ to 3.8 × 10² cells, 0.6 × 10° to 3.6 × 10° cysts, and 6.0 × 10¹ to 1.7 × 10² cells per 1,000 ml of water, respectively. Six risk scenarios were considered for exposure to Salmonella spp., G. lamblia, and L. pneumophila. For Salmonella spp. and G. lamblia, these scenarios were (i) liquid ingestion due to drinking of rainwater on a daily basis, (ii) accidental liquid ingestion due to hosing twice a week, (iii) aerosol ingestion due to showering on a daily basis, and (iv) aerosol ingestion due to hosing twice a week. For L. pneumophila, these scenarios were (i) aerosol inhalation due to showering on a daily basis and (ii) aerosol inhalation due to hosing twice a week. The risk of infection from Salmonella spp., G. lamblia, and L. pneumophila associated with the use of rainwater for showering and garden hosing was calculated to be well below the threshold value of one extra infection per 10,000 persons per year in urban SEQ. However, the risk of infection from ingesting Salmonella spp. and G. lamblia via drinking exceeded this threshold value and indicated that if undisinfected rainwater is ingested by drinking, then the incidences of the gastrointestinal diseases salmonellosis and giardiasis are expected to range from 9.8 × 10° to 5.4 × 10¹ (with a mean of 1.2 × 10¹ from Monte Carlo analysis) and from 1.0 × 10¹ to 6.5 × 10¹ cases (with a mean of 1.6 × 10¹ from Monte Carlo analysis) per 10,000 persons per year, respectively, in urban SEQ. Since this health risk seems higher than that expected from the reported incidences of gastroenteritis, the assumptions used to estimate these infection risks are critically examined. Nonetheless, it would seem prudent to disinfect rainwater for use as potable water.


Subject(s)
DNA, Bacterial/genetics , DNA, Protozoan/genetics , Intestinal Diseases/epidemiology , Rain , Risk Assessment , Water Microbiology , Water/parasitology , Bacterial Load , Cell Count , DNA, Bacterial/isolation & purification , DNA, Fungal/genetics , DNA, Fungal/isolation & purification , DNA, Protozoan/isolation & purification , Intestinal Diseases/microbiology , Intestinal Diseases/parasitology , Polymerase Chain Reaction , Queensland
8.
Can J Microbiol ; 56(6): 471-9, 2010 Jun.
Article in English | MEDLINE | ID: mdl-20657617

ABSTRACT

The study aimed to evaluate the suitability of Escherichia coli, enterococci, and Clostridium perfringens for assessing the microbiological quality of roof-harvested rainwater and assessing whether the concentrations of these faecal indicators can be used to predict the presence or absence of specific zoonotic bacterial or protozoan pathogens. From a total of 100 samples tested, 58%, 83%, and 46% of samples were found to be positive for, respectively, E. coli, enterococci, and Clostridium perfringens spores, as determined by traditional culture-based methods. Additionally, in the samples tested, 7%, 19%, 1%, 8%, 17%, and 15% were PCR positive for Aeromonas hydrophila lip, Campylobacter coli ceuE, Campylobacter jejuni mapA, Legionella pneumophila mip, Salmonella invA, and Giardia lamblia beta-giardin genes, respectively. However, none of the samples was positive for E. coli O157 lipopolysaccharide, verocytotoxin 1, and verocytotoxin 2 and Cryptosporidium parvum oocyst wall protein genes. The presence or absence of these potential pathogens did not correlate with any of the faecal indicator bacterial concentrations as determined by a binary logistic regression model. The roof-harvested rainwater samples tested in this study appeared to be of poor microbiological quality, and no significant correlation was found between the concentration of faecal indicators and pathogenic microorganisms. The use of faecal indicator bacteria raises questions regarding their reliability in assessing the microbiological quality of water and particularly their poor correlation with pathogenic microorganisms. The presence of one or more zoonotic pathogens suggests that the microbiological analysis of water should be performed and that appropriate treatment measures should be undertaken, especially in tanks where the water is used for drinking.


Subject(s)
Clostridium perfringens/isolation & purification , Colony Count, Microbial , Enterococcus/isolation & purification , Escherichia coli/isolation & purification , Water Microbiology , Animals , Bacterial Proteins/genetics , Disease Transmission, Infectious/prevention & control , Humans , Polymerase Chain Reaction/methods , Protozoan Proteins/genetics , Queensland , Zoonoses/microbiology , Zoonoses/transmission
9.
Water Res ; 43(19): 4908-17, 2009 Nov.
Article in English | MEDLINE | ID: mdl-19818987

ABSTRACT

Human-specific Bacteroides HF183 (HS-HF183), human-specific Enterococci faecium esp (HS-esp), human-specific adenoviruses (HS-AVs) and human-specific polyomaviruses (HS-PVs) assays were evaluated in freshwater, seawater and distilled water to detect fresh sewage. The sewage spiked water samples were also tested for the concentrations of traditional fecal indicators (i.e., Escherichia coli, enterococci and Clostridium perfringens) and enteric viruses such as enteroviruses (EVs), sapoviruses (SVs), and torquetenoviruses (TVs). The overall host-specificity of the HS-HF183 marker to differentiate between humans and other animals was 98%. However, the HS-esp, HS-AVs and HS-PVs showed 100% host-specificity. All the human-specific markers showed >97% sensitivity to detect human fecal pollution. E. coli, enterococci and, C. perfringens were detected up to dilutions of sewage 10(-5), 10(-4) and 10(-3) respectively. HS-esp, HS-AVs, HS-PVs, SVs and TVs were detected up to dilution of sewage 10(-4) whilst EVs were detected up to dilution 10(-5). The ability of the HS-HF183 marker to detect fresh sewage was 3-4 orders of magnitude higher than that of the HS-esp and viral markers. The ability to detect fresh sewage in freshwater, seawater and distilled water matrices was similar for human-specific bacterial and viral marker. Based on our data, it appears that human-specific molecular markers are sensitive measures of fresh sewage pollution, and the HS-HF183 marker appears to be the most sensitive among these markers in terms of detecting fresh sewage. However, the presence of the HS-HF183 marker in environmental waters may not necessarily indicate the presence of enteric viruses due to their high abundance in sewage compared to enteric viruses. More research is required on the persistency of these markers in environmental water samples in relation to traditional fecal indicators and enteric pathogens.


Subject(s)
Environmental Monitoring/methods , Fresh Water/microbiology , Seawater/microbiology , Sewage/analysis , Water Pollutants/analysis , Adenoviridae/genetics , Adenoviridae/isolation & purification , Bacteroides/genetics , Bacteroides/isolation & purification , DNA, Bacterial/genetics , DNA, Viral/genetics , Enterococcus/genetics , Enterococcus/isolation & purification , Fresh Water/virology , Genetic Markers , Polymerase Chain Reaction , Polyomavirus/genetics , Polyomavirus/isolation & purification , RNA, Bacterial/genetics , RNA, Viral/genetics , Seawater/virology , Sewage/microbiology , Sewage/virology
10.
Water Res ; 43(19): 4872-7, 2009 Nov.
Article in English | MEDLINE | ID: mdl-19783274

ABSTRACT

The host specificity of the five published sewage-associated Bacteroides markers (i.e., HF183, BacHum, HuBac, BacH and Human-Bac) was evaluated in Southeast Queensland, Australia by testing fecal DNA samples (n=186) from 11 animal species including human fecal samples collected via influent to a sewage treatment plant (STP). All human fecal samples (n=50) were positive for all five markers indicating 100% sensitivity of these markers. The overall specificity of the HF183 markers to differentiate between humans and animals was 99%. The specificities of the BacHum and BacH markers were>94%, suggesting that these markers are suitable for the detection of sewage pollution in environmental waters in Australia. The HuBac (i.e., 63%) and Human-Bac (i.e., 79% specificity) markers performed poorly in distinguishing between the sources of human and animal fecal samples. It is recommended that the specificity of the sewage-associated markers must be rigorously tested prior to its application to identify the sources of fecal pollution in environmental waters.


Subject(s)
Bacteroides/isolation & purification , Polymerase Chain Reaction/methods , Sewage/microbiology , Water Pollutants/isolation & purification , Animals , Bacteroides/genetics , DNA, Bacterial/genetics , Environmental Monitoring , Humans
11.
Water Res ; 43(19): 4918-28, 2009 Nov.
Article in English | MEDLINE | ID: mdl-19631959

ABSTRACT

The prevalence and concentrations of Campylobacter jejuni, Salmonella spp. and enterohaemorrhagic Escherichia coli (EHEC) were investigated in surface waters in Brisbane, Australia using quantitative PCR (qPCR) based methodologies. Water samples were collected from Brisbane City Botanic Gardens (CBG) Pond, and two urban tidal creeks (i.e., Oxley Creek and Blunder Creek). Of the 32 water samples collected, 8 (25%), 1 (3%), 9 (28%), 14 (44%), and 15 (47%) were positive for C. jejuni mapA, Salmonella invA, EHEC O157 LPS, EHEC VT1, and EHEC VT2 genes, respectively. The presence/absence of the potential pathogens did not correlate with either E. coli or enterococci concentrations as determined by binary logistic regression. In conclusion, the high prevalence, and concentrations of potential zoonotic pathogens along with the concentrations of one or more fecal indicators in surface water samples indicate a poor level of microbial quality of surface water, and could represent a significant health risk to users. The results from the current study would provide valuable information to the water quality managers in terms of minimizing the risk from pathogens in surface waters.


Subject(s)
Campylobacter jejuni/isolation & purification , Environmental Monitoring/methods , Escherichia coli/isolation & purification , Fresh Water/microbiology , Salmonella/isolation & purification , Water Pollutants/isolation & purification , Animals , Campylobacter jejuni/genetics , DNA, Bacterial/genetics , Escherichia coli/genetics , Genes, Bacterial/genetics , Polymerase Chain Reaction , Salmonella/genetics , Water Pollutants/analysis , Zoonoses
12.
Water Res ; 43(5): 1237-46, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19168199

ABSTRACT

Increasing urbanisation and changes in land use lead to adverse impacts on the quality of natural water resources. The specific sources of contamination are often difficult to identify using conventional water quality monitoring techniques. This acts as a significant constraint to the development of appropriate management techniques to protect natural water resources. Consequently, alternative means of identifying pollutant sources and their locality are necessary. In this study, Antibiotic Resistance Patterns (ARP) were established for a library of 1005 known Escherichia coli source isolates obtained from human and non-human (domesticated animals, livestock and wild) sources in an urbanizing catchment in Queensland State, Australia. Discriminant Analysis (DA) was used to differentiate between the ARP of source isolates and to identify the sources of faecal contamination. Partial Least Square (PLS) regression was then utilised on identified human source isolates to correlate their locality with specified sampling locations within the catchment. The resulting ARP DA indicated that a majority of the faecal contamination in the rural areas was non-human. However, the percentage of human isolates increased significantly in urbanized areas using on site systems for wastewater treatment. The PLS regression was able to develop predictive models which indicated a high correlation of human source isolates from the urban area. The study results confirm the feasibility of using ARP for source tracking faecal contamination in surface waters, as well as predicting their point of origin.


Subject(s)
Catchment Area, Health , Cities , Drug Resistance, Microbial , Feces/microbiology , Water Microbiology , Water Pollutants/isolation & purification , Australia , Discriminant Analysis , Escherichia coli/isolation & purification , Geography , Humans , Least-Squares Analysis , Reproducibility of Results
13.
Water Sci Technol ; 58(3): 579-86, 2008.
Article in English | MEDLINE | ID: mdl-18725724

ABSTRACT

Multiple host-specific molecular markers were used to detect the sources of faecal pollution in a mixed land use non-sewered catchment in Southeast Queensland, Australia. These markers included human-specific Bacteroides (HF183 and HF134), cattle-specific Bacteroides (CF128), dog-specific Bacteroides (BacCan) and human-specific enterococci surface protein (esp) markers. The sensitivity and specificity of these markers were determined by testing 197 faecal samples from 13 host groups. The overall sensitivity and specificity of these markers was high (sensitivity>/=85% and specificity>/=93%) indicating their suitability for detecting the sources of faecal pollution. Of the 16 samples collected from the study area, 14 (87%) were positive for at least one of the molecular marker tested. Amongst all the markers, cattle-specific CF128 was more prevalent than others, followed by human-specific HF183 which was consistently detected in samples collected from sites within close proximity to urban development. Significant correlations were found between E. coli and enterococci concentrations with the positive/negative results of human-specific Bacteroides HF183 (p<0.001, p<0.0001) and HF134 (p<0.001, p<0.004) markers. No correlations were found between faecal indicators (E. coli or enterococci) with the CF128 or BacCan markers. A significant correlation was also found between enterococci concentrations and the presence/absence of the esp marker (p<0.02). Based on the results, it appears that the host-specific markers such as HF183 and esp are a sensitive measure of sources of human faecal pollution in surface waters in Southeast Queensland, Australia.


Subject(s)
Bacteria/isolation & purification , Biomarkers/analysis , Feces/microbiology , Animals , Bacteria/genetics , Bacterial Proteins/analysis , Bacterial Proteins/genetics , Bacteroides/genetics , Bacteroides/isolation & purification , Cattle , Dogs , Enterococcus/genetics , Enterococcus/isolation & purification , Escherichia coli/genetics , Escherichia coli/isolation & purification , Geography , Humans , Membrane Proteins/analysis , Membrane Proteins/genetics , Queensland
14.
Appl Environ Microbiol ; 74(17): 5490-6, 2008 Sep.
Article in English | MEDLINE | ID: mdl-18621865

ABSTRACT

In this study, the microbiological quality of roof-harvested rainwater was assessed by monitoring the concentrations of Escherichia coli, enterococci, Clostridium perfringens, and Bacteroides spp. in rainwater obtained from tanks in Southeast Queensland, Australia. Samples were also tested using real-time PCR (with SYBR Green I dye) for the presence of potential pathogenic microorganisms. Of the 27 rainwater samples tested, 17 (63%), 21 (78%), 13 (48%), and 24 (89%) were positive for E. coli, enterococci, C. perfringens, and Bacteroides spp., respectively. Of the 27 samples, 11 (41%), 7 (26%), 4 (15%), 3 (11%), and 1 (4%) were PCR positive for the Campylobacter coli ceuE gene, the Legionella pneumophila mip gene, the Aeromonas hydrophila lip gene, the Salmonella invA gene, and the Campylobacter jejuni mapA gene. Of the 21 samples tested, 4 (19%) were positive for the Giardia lamblia beta-giardin gene. The binary logistic regression model indicated a positive correlation (P < 0.02) between the presence/absence of enterococci and A. hydrophila. In contrast, the presence/absence of the remaining potential pathogens did not correlate with traditional fecal indicators. The poor correlation between fecal indicators and potential pathogens suggested that fecal indicators may not be adequate to assess the microbiological quality of rainwater and consequent health risk.


Subject(s)
Bacteria/isolation & purification , Polymerase Chain Reaction , Rain/microbiology , Water Microbiology , Bacteria/genetics , Benzothiazoles , Colony Count, Microbial , DNA, Bacterial/genetics , Diamines , Environmental Monitoring , Feces/microbiology , Logistic Models , Organic Chemicals , Prevalence , Queensland , Quinolines , Risk , Statistics, Nonparametric , Water Pollutants/analysis
15.
Mar Pollut Bull ; 56(8): 1469-75, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18561957

ABSTRACT

Biochemical fingerprinting (BF) databases of 524 enterococci and 571 Escherichia coli isolates and an antibiotic resistance analysis (ARA) database comprising of 380 E. coli isolates from four suspected sources (i.e. dogs, chickens, waterfowls, and human sewage) were developed to predict the sources of faecal pollution in a recreational coastal lake. Twenty water samples representing four sampling episodes were collected from five sites and the enterococci and E. coli population from each site were compared with those of the databases. The degree of similarity between bacterial populations was measured as population similarity (Sp) coefficient. Using the BF-database, bacterial populations of waterfowls showed the highest similarity with the water samples followed by a sewage treatment plant (STP). Higher population similarities were found between samples from STP and water samples especially at two sites (T2 and T3) which were located near the sewerage pipes collecting wastewater from the study area. When using the ARA-database, the highest similarity was found between E. coli populations from STP and water samples at sites T2 and T4. Both faecal indicators and as well as methods predicted human faecal pollution, possibly through leakage from submerged sewerage pipes. The results indicated that the Sp-analysis of faecal indicator bacterial populations from suspected sources and water samples can be used as a simple tool to predict the source(s) of faecal pollution in surface waters.


Subject(s)
Environmental Monitoring , Feces/microbiology , Seawater/microbiology , Water Pollutants/analysis , Colony Count, Microbial , Drug Resistance, Bacterial , Enterococcus/chemistry , Enterococcus/isolation & purification , Escherichia coli/chemistry , Escherichia coli/drug effects , Escherichia coli/isolation & purification
16.
Sci Total Environ ; 367(2-3): 847-54, 2006 Aug 31.
Article in English | MEDLINE | ID: mdl-16839593

ABSTRACT

An experimental system has been set up to investigate the reaction kinetics of framboidal pyrite oxidation in real, reactive acid sulfate soil assemblages. This study was undertaken to determine the degree to which pyrite oxidation rates are reduced by bacteriological reactions and organic matter, which both modify the net reaction mechanisms and compete for available oxygen. The results from these experimental runs not only confirm the role of organic matter in mitigating pyrite oxidation but indicate that at least initially, the acidity produced is consumed or otherwise ameliorated by parallel reactions. Tracking pH or [H+] in both a reactor and in soil does not accurately reflect reaction progress and may not correctly indicate the true level of risk. In comparison, the tracking of pyrite oxidation with the concentration of sulfate in solution is not affected by side reactions or precipitation and is therefore a better indicator for the rate of pyrite destruction.


Subject(s)
Iron/chemistry , Soil Microbiology , Soil/analysis , Sulfides/chemistry , Hydrogen-Ion Concentration , Kinetics , Microscopy, Electron, Scanning , Oxidation-Reduction , Queensland , Sulfates/chemistry
17.
J Appl Microbiol ; 99(3): 471-82, 2005.
Article in English | MEDLINE | ID: mdl-16108788

ABSTRACT

AIMS: To identify the sources of faecal contamination in investigated surface waters and to determine the significance of onsite wastewater treatment systems (OWTS) as a major contributor to faecal contamination. METHODS AND RESULTS: Antibiotic resistance patterns (ARP) were established for a library of 717 known Escherichia coli source isolates obtained from human, domesticated animals, livestock and wild sources. Eight commonly used antibiotics, including amoxicillin, cephalothin, erythromycin, gentamicin, ofloxacin, chlortetracycline, tetracycline and moxalactam, at four different concentrations were used to obtain ARPs for E. coli isolates. Discriminant analysis (DA) was used to differentiate between the ARP of sources isolates. The developed ARP library was found to be adequate for discriminating human from nonhuman isolates, and was used to classify 256 enumerated E. coli isolates collected from monitored surface water locations. CONCLUSIONS: The resulting ARP DA indicated that a majority of the faecal contamination in more rural areas was nonhuman; however, the percentage of human isolates increased significantly in urbanized areas using OWTS for wastewater treatment. SIGNIFICANCE AND IMPACT OF THE STUDY: This study signifies the feasibility of using ARP for source tracking faecal contamination in surface waters, and linking faecal contamination to OWTS. The information will enable regulatory authorities to implement appropriate management practices to reduce the contamination of water resources caused by high densities and failing OWTS.


Subject(s)
Anti-Bacterial Agents/pharmacology , Escherichia coli/physiology , Feces/microbiology , Water Microbiology , Water Pollution , Amoxicillin/pharmacology , Animals , Cephalothin/pharmacology , Chlortetracycline/pharmacology , Colony Count, Microbial , Discriminant Analysis , Drug Resistance, Bacterial , Erythromycin/pharmacology , Escherichia coli/classification , Escherichia coli/drug effects , Gentamicins/pharmacology , Humans , Moxalactam/pharmacology , Ofloxacin/pharmacology , Tetracycline/pharmacology
20.
Ceylon Med J ; 47(2): 50-1, 2002 Jun.
Article in English | MEDLINE | ID: mdl-12140878

ABSTRACT

OBJECTIVES: To assay theophylline blood levels in a sample of Sri Lankan chronic asthmatics taking oral theophylline, and to evaluate a simple and cost effective ultraviolet spectrophotometric assay for theophylline levels in blood. SETTING: Chronic asthmatics taking oral theophylline attending medical clinics at the National Hospital of Sri Lanka (NHSL) were recruited for the study. Blood samples were collected from recruited patients on their subsequent clinic visit. DESIGN AND METHODS: A cross-sectional study of theophylline blood levels. Blood samples were assayed for trough theophylline levels using two methods: an automated homogeneous enzyme immunoassay (EMIT), and a low cost ultraviolet spectrophotometric method. RESULTS: Only 2 patients of the 24 had theophylline blood levels in the accepted therapeutic range (10 to 20 micrograms/ml) (3.4); 19 patients had levels under 5 micrograms/ml. A correlation coefficient of 0.99 was obtained in the statistical comparison of the two methods, indicating that the spectrophotometric method has similar accuracy as the reference EMIT assay. CONCLUSIONS: The results signal a need for monitoring of theophylline in asthmatics when accepted clinical indications are present. The ultraviolet spectrophotometric method is ideal to initiate therapeutic drug monitoring (TDM) in the country because of its low cost (about Rs. 55 per assay), requiring only a UV recording spectrophotometer.


Subject(s)
Asthma/blood , Bronchodilator Agents/blood , Theophylline/blood , Adult , Aged , Asthma/drug therapy , Bronchodilator Agents/pharmacokinetics , Cross-Sectional Studies , Drug Monitoring , Enzyme Multiplied Immunoassay Technique , Female , Humans , Male , Middle Aged , Spectrophotometry, Ultraviolet , Theophylline/pharmacokinetics
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