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1.
Phys Chem Chem Phys ; 18(6): 4952-60, 2016 Feb 14.
Article in English | MEDLINE | ID: mdl-26807977

ABSTRACT

What are the limits of size reduction for information processing devices based on chemical reactions? In this paper, we partially answer this question. We show that a thermochemical system can be used to design a discriminator of the parameters associated with oscillations of the ambient temperature. Depending on the amplitude and frequency of the oscillations, the system exhibits sharp transitions between different types of its time evolutions. This phenomenon can be used to discriminate between different parameter values describing the oscillating environment. We investigate the reliability of the thermochemical discriminator as a function of the number of molecules involved in the reactions. A stochastic model of chemical reactions and heat exchange with the neighborhood, in which the number of molecules explicitly appears, is introduced. For the selected values of the parameters, thermochemical discriminators operating with less than 10(5) molecules appear to be unreliable.

2.
Philos Trans A Math Phys Eng Sci ; 373(2046)2015 Jul 28.
Article in English | MEDLINE | ID: mdl-26078345

ABSTRACT

Chemical reactions are responsible for information processing in living organisms. It is believed that the basic features of biological computing activity are reflected by a reaction-diffusion medium. We illustrate the ideas of chemical information processing considering the Belousov-Zhabotinsky (BZ) reaction and its photosensitive variant. The computational universality of information processing is demonstrated. For different methods of information coding constructions of the simplest signal processing devices are described. The function performed by a particular device is determined by the geometrical structure of oscillatory (or of excitable) and non-excitable regions of the medium. In a living organism, the brain is created as a self-grown structure of interacting nonlinear elements and reaches its functionality as the result of learning. We discuss whether such a strategy can be adopted for generation of chemical information processing devices. Recent studies have shown that lipid-covered droplets containing solution of reagents of BZ reaction can be transported by a flowing oil. Therefore, structures of droplets can be spontaneously formed at specific non-equilibrium conditions, for example forced by flows in a microfluidic reactor. We describe how to introduce information to a droplet structure, track the information flow inside it and optimize medium evolution to achieve the maximum reliability. Applications of droplet structures for classification tasks are discussed.

3.
Article in English | MEDLINE | ID: mdl-24827316

ABSTRACT

Information processing with an excitable chemical medium, like the Belousov-Zhabotinsky (BZ) reaction, is typically based on information coding in the presence or absence of excitation pulses. Here we present a new concept of Boolean coding that can be applied to an oscillatory medium. A medium represents the logical TRUE state if a selected region oscillates with a high frequency. If the frequency fails below a specified value, it represents the logical FALSE state. We consider a medium composed of disks encapsulating an oscillatory mixture of reagents, as related to our recent experiments with lipid-coated BZ droplets. We demonstrate that by using specific geometrical arrangements of disks containing the oscillatory medium one can perform logical operations on variables coded in oscillation frequency. Realizations of a chemical signal diode and of a single-bit memory with oscillatory disks are also discussed.

4.
Phys Rev E Stat Nonlin Soft Matter Phys ; 72(4 Pt 2): 046201, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16383506

ABSTRACT

A spatially distributed excitable chemical medium can collect and process information coded in the propagating pulses of excitation. We consider the problem of distance sensing with the use of a nonlinear chemical medium. We demonstrate that a sensor that can feel the distance separating it from a source of periodic excitations can be constructed by a proper geometrical arrangement of excitable and nonexcitable regions. The sensor returns information about the distance in the frequency of outgoing pulses. The sensor functionality is tested by simulations based on the Rovinsky-Zhabotinsky model. The results are confirmed in experiments performed for a ruthenium-catalyzed Belousov-Zhabotinsky reaction.

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