The synergistic effect of climatic factors on malaria transmission: a predictive approach for northeastern states of India.

The northeast region of India is highlighted as the most vulnerable region for malaria. This study attempts to explore the epidemiological profile and quantify the climate-induced influence on malaria cases in the context of tropical states, taking Meghalaya and Tripura as study areas. Monthly malaria cases and meteorological data from 2011 to 2018 and 2013 to 2019 were collected from the states of Meghalaya and Tripura, respectively. The nonlinear associations between individual and synergistic effect of meteorological factors and malaria cases were assessed, and climate-based malaria prediction models were developed using the generalized additive model (GAM) with Gaussian distribution. During the study period, a total of 216,943 and 125,926 cases were recorded in Meghalaya and Tripura, respectively, and majority of the cases occurred due to the infection of Plasmodium falciparum in both the states. The temperature and relative humidity in Meghalaya and temperature, rainfall, relative humidity, and soil moisture in Tripura showed a significant nonlinear effect on malaria; moreover, the synergistic effects of temperature and relative humidity (SI=2.37, RERI=0.58, AP=0.29) and temperature and rainfall (SI=6.09, RERI=2.25, AP=0.61) were found to be the key determinants of malaria transmission in Meghalaya and Tripura, respectively. The developed climate-based malaria prediction models are able to predict the malaria cases accurately in both Meghalaya (RMSE: 0.0889; R2: 0.944) and Tripura (RMSE: 0.0451; R2: 0.884). The study found that not only the individual climatic factors can significantly increase the risk of malaria transmission but also the synergistic effects of climatic factors can drive the malaria transmission multifold. This reminds the policymakers to pay attention to the control of malaria in situations with high temperature and relative humidity and high temperature and rainfall in Meghalaya and Tripura, respectively.

Impact of COVID-19 vaccination: a global perspective.

Introduction: The COVID-19 pandemic has caused widespread morbidity, mortality, and socio-economic disruptions worldwide. Vaccination has proven to be a crucial strategy in controlling the spread of the virus and mitigating its impact. Objective: The study focuses on assessing the effectiveness of COVID-19 vaccination in reducing the incidence of positive cases, hospitalizations, and ICU admissions. The presented study is focused on the COVID-19 fully vaccinated population by considering the data from the first positive case reported until 20 September 2021. Methods: Using data from multiple countries, time series analysis is deployed to investigate the variations in the COVID-19 positivity rates, hospitalization rates, and ICU requirements after successful vaccination campaigns at the country scale. Results: Analysis of the COVID-19 positivity rates revealed a substantial decline in countries with high pre-vaccination rates. Within 1-3 months of vaccination campaigns, these rates decreased by 20-44%. However, certain countries experienced an increase in positivity rates with the emergence of the new Delta variant, emphasizing the importance of ongoing monitoring and adaptable vaccination strategies. Similarly, the analysis of hospitalization rates demonstrated a steady decline as vaccination drive rates rose in various countries. Within 90 days of vaccination, several countries achieved hospitalization rates below 200 per million. However, a slight increase in hospitalizations was observed in some countries after 180 days of vaccination, underscoring the need for continued vigilance. Furthermore, the ICU patient rates decreased as vaccination rates increased across most countries. Within 120 days, several countries achieved an ICU patient rate of 20 per million, highlighting the effectiveness of vaccination in preventing severe cases requiring intensive care. Conclusion: COVID-19 vaccination has proven to be very much effective in reducing the incidence of cases, hospitalizations, and ICU admissions. However, ongoing surveillance, variant monitoring, and adaptive vaccination strategies are crucial for maximizing the benefits of vaccination and effectively controlling the spread of the virus.

Weather integrated malaria prediction system using Bayesian structural time series model for northeast states of India.

Malaria is an endemic disease in India and targeted to eliminate by the year 2030. The present study is aimed at understanding the epidemiological patterns of malaria transmission dynamics in Assam and Arunachal Pradesh followed by the development of a malaria prediction model using monthly climate factors. A total of 144,055 cases in Assam during 2011-2018 and 42,970 cases in Arunachal Pradesh were reported during the 2011-2019 period observed, and Plasmodium falciparum (74.5%) was the most predominant parasite in Assam, whereas Plasmodium vivax (66%) in Arunachal Pradesh. Malaria transmission showed a strong seasonal variation where most of the cases were reported during the monsoon period (Assam, 51.9%, and Arunachal Pradesh, 53.6%). Similarly, the malaria incidence was highest in the male population in both states (Asam, 55.75%, and Arunachal Pradesh, 51.43%), and the disease risk is also higher among the > 15 years age group (Assam, 61.7%, and Arunachal Pradesh, 67.9%). To predict the malaria incidence, Bayesian structural time series (BSTS) and Seasonal Auto-Regressive Integrated Moving Average with eXogenous factors (SARIMAX) models were implemented. A statistically significant association between malaria cases and climate variables was observed. The most influencing climate factors are found to be maximum and mean temperature with a 6-month lag, and it showed a negative association with malaria incidence. The BSTS model has shown superior performance on the optimal auto-correlated dataset (OAD) which contains auto-correlated malaria cases, cross-correlated climate variables besides malaria cases in both Assam (RMSE, 0.106; MAE, 0.089; and SMAPE, 19.2%) and Arunachal Pradesh (RMSE, 0.128; MAE, 0.122; and SMAPE, 22.6%) than the SARIMAX model. The findings suggest that the predictive performance of the BSTS model is outperformed, and it may be helpful for ongoing intervention strategies by governmental and nongovernmental agencies in the northeast region to combat the disease effectively.

Assessment of Aerosol Optical Depth over Indian Subcontinent during COVID-19 lockdown (March-May 2020).

The COVID-19 pandemic has created a major threat to human beings and huge losses over the globe. In order to control the pandemic spread, almost all parts of the world imposed lockdown. The imposed lockdown drastically impacted on reduction in the atmospheric pollutions and also resulted in net decrease in aerosol optical depth (AOD) in the atmosphere. In this study, the reduction in the AOD during the COVID-19 lockdown over the Indian subcontinent is being assessed using the moderate resolution imaging spectroradiometer (MODIS) satellite data available in Giovanni version 4.34 developed by NASA. The long-term mean analysis is computed considering 20 years (i.e., 2000-2019) data on Terra platform with a temporal resolution of daily and monthly and spatial resolution of 1 degree. The dataset of AOD with a temporal resolution of monthly was used for investigation of AOD anomaly for March, April and May 2020, and the seasonal variation (March to May 2020) is also assessed. Similarly, the daily scale dataset was used to investigate the percentage change in AOD during pre-lockdown and lockdown period with respect to long-term mean. The key findings in the present study show that reduction in AOD level over Indian subcontinent is approximately 14.75% during the lockdown period with spatial variation in the magnitude from region to region. The level of AOD is greatly reduced in the northern part of India (~ 22.53%), whereas changes in the southern part of India are much less (~ -0.31%); this may be due to ongoing anthropogenic activities during the lockdown period in this region. Furthermore, a positive AOD anomaly was observed in the eastern and central regions of India (i.e., over the states of Odisha, Chhattisgarh, Telangana, Jharkhand, West Bengal, Part of Maharashtra and Karnataka). However, negative AOD anomaly was observed in the north and northwest regions of India, whereas not much change in the AOD anomaly in other parts of the country. The overall assessment of the AOD level shows a net decrease over the Indian subcontinent during the lockdown period, i.e., March to May 2020. This kind of assessment study will surely help the government for the sustainable policy decisions for atmospheric pollution control by implementing proper lockdown procedures over various parts of the country.

Impact of comorbidity on patients with COVID-19 in India: A nationwide analysis.

Background: The emergence of coronavirus disease (COVID-19) as a global pandemic has resulted in the loss of many lives and a significant decline in global economic losses. Thus, for a large country like India, there is a need to comprehend the dynamics of COVID-19 in a clustered way. Objective: To evaluate the clinical characteristics of patients with COVID-19 according to age, gender, and preexisting comorbidity. Patients with COVID-19 were categorized according to comorbidity, and the data over a 2-year period (1 January 2020 to 31 January 2022) were considered to analyze the impact of comorbidity on severe COVID-19 outcomes. Methods: For different age/gender groups, the distribution of COVID-19 positive, hospitalized, and mortality cases was estimated. The impact of comorbidity was assessed by computing incidence rate (IR), odds ratio (OR), and proportion analysis. Results: The results indicated that COVID-19 caused an exponential growth in mortality. In patients over the age of 50, the mortality rate was found to be very high, ~80%. Moreover, based on the estimation of OR, it can be inferred that age and various preexisting comorbidities were found to be predictors of severe COVID-19 outcomes. The strongest risk factors for COVID-19 mortality were preexisting comorbidities like diabetes (OR: 2.39; 95% confidence interval (CI): 2.31-2.47; p < 0.0001), hypertension (OR: 2.31; 95% CI: 2.23-2.39; p < 0.0001), and heart disease (OR: 2.19; 95% CI: 2.08-2.30; p < 0.0001). The proportion of fatal cases among patients positive for COVID-19 increased with the number of comorbidities. Conclusion: This study concluded that elderly patients with preexisting comorbidities were at an increased risk of COVID-19 mortality. Patients in the elderly age group with underlying medical conditions are recommended for preventive medical care or medical resources and vaccination against COVID-19.

Temperature dependent transmission potential model for chikungunya in India.

Chikungunya is a major public health problem in tropical and subtropical countries of the world. During 2016, the National Capital Territory of Delhi experienced an epidemic caused by chikungunya virus with >12,000 cases. Similarly, other parts of India also reported a large number of chikungunya cases, highest incidence rate was observed during 2016 in comparison with last 10 years of epidemiological data. In the present study we exploited R0 mathematical model to understand the transmission risk of chikungunya virus which is transmitted by Aedes vectors. This mechanistic transmission model is climate driven and it predicts how the probability and transmission risk of chikungunya occurs in India. The gridded temperature data from 1948 to 2016 shows that the mean temperatures are gradually increasing in South India from 1982 to 2016 when compared with data of 1948-1981 time scale. During 1982-2016 period many states have reported gradual increase in risk of chikungunya transmission when compared with the 1948-1981 period. The highest transmission risk of chikungunya in India due to favourable ecoclimatic conditions, increasing temperature leads to low extrinsic incubation period, mortality rates and high biting rate were predicted for the year 2016. The epidemics in 2010 and 2016 are also strongly connected to El Nino conditions which favours transmission of chikungunya in India. The study shows that transmission of chikungunya occurs between 20 and 34 °C but the peak transmission occurs at 29 °C. The infections of chikungunya in India are due to availability of vectors and optimum temperature conditions influence chikungunya transmission faster in India. This climate based empirical model helps the public health authorities to assess the risk of chikungunya and one can implement necessary control measures before onset of disease outbreak.