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1.
Int J Obstet Anesth ; 26: 4-7, 2016 May.
Article in English | MEDLINE | ID: mdl-26971650

ABSTRACT

BACKGROUND: The combined spinal-epidural technique for labor analgesia has several advantages over the traditional epidural technique, including faster onset, greater maternal satisfaction, and decreased need for physician boluses. Proponents of the epidural technique criticize the combined spinal-epidural technique, arguing that the epidural catheter remains untested and thus may not be reliable if needed for surgical intervention. We compared failure rates and time of failure between techniques in our tertiary-care academic practice. METHODS: Data regarding failed catheters were collected from October 2012 to September 2014 as part of our Quality Assurance program. Failed catheters were defined as any catheter replaced after it was considered to be properly placed and then determined to be intravascular, one sided or resulting in poor maternal analgesia or anesthesia. RESULTS: A total of 5487 analgesics were performed (3980 combined spinal-epidural; 1507 epidural). Eighty-five combined spinal-epidural catheters (2.1%) and 59 epidural catheters (3.9%) were replaced during labor (P<0.001). Mean time to replacement was 512±422min and 354±300min for the combined spinal-epidural (n=80) and epidural (n=57) groups, respectively (P=0.02). Median time to replacement was 398 [IQR 131-578] min and 281 [IQR 186-767] min for combined spinal-epidural and epidural groups, respectively (P<0.0001). CONCLUSION: We were able to demonstrate that catheters placed using a combined spinal-epidural technique were less likely to fail during labor and that the time to detection of a failed catheter was significantly longer in the combined spinal-epidural group. Our findings validate the combined spinal-epidural technique as reliable for labor analgesia and tend to refute the theory of the untested catheter.


Subject(s)
Analgesia, Epidural/adverse effects , Analgesia, Obstetrical/adverse effects , Anesthesia, Spinal/adverse effects , Catheterization/adverse effects , Adult , Cesarean Section , Equipment Failure , Female , Humans
2.
Oncogene ; 26(33): 4872-6, 2007 Jul 19.
Article in English | MEDLINE | ID: mdl-17297457

ABSTRACT

The adenomatous polyposis coli (APC) tumor suppressor is inactivated by mutation in most colorectal tumors. APC is a component of the Wnt signaling pathway and is best known for its ability to downregulate beta-catenin and consequent effects on transcriptional regulation. Previous work demonstrated that APC accelerates apoptosis-associated caspase activity independently of transcription, and suggested novel tumor suppressor functions of APC. In this work, we have mapped the APC apoptosis-accelerating region to amino acids (aa) 1-760 by testing a series of non-overlapping APC segments. Interestingly, this segment corresponds to a stable group II caspase cleavage product of APC released during apoptosis that includes the amino-terminal aa1-777. Mutation of the APC aspartic acid residue at position 777 to an alanine completely abolished in vitro cleavage of APC by a recombinant group II caspase and rendered the full-length protein unable to accelerate apoptosis in vitro. A truncated APC protein associated with familial and sporadic colorectal cancer, also unable to accelerate apoptosis in vitro and in vivo, is resistant to group II caspase cleavage. These results demonstrate that cleavage of APC and the subsequent release of an amino-terminal segment are necessary for the transcription-independent mechanism of APC-mediated apoptosis.


Subject(s)
Adenomatous Polyposis Coli Protein/metabolism , Apoptosis/physiology , Caspases/metabolism , Peptide Fragments/metabolism , Adenomatous Polyposis Coli Protein/chemistry , Adenomatous Polyposis Coli Protein/genetics , Apoptosis/genetics , Blotting, Western , Caspase 3/genetics , Caspase 3/metabolism , Caspases/genetics , Cell Line, Tumor , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Humans , Luciferases/genetics , Luciferases/metabolism , Molecular Weight , Mutation , Peptide Fragments/chemistry , Peptide Fragments/genetics , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Recombinant Proteins/metabolism , Transcription, Genetic , Transfection , beta Catenin/metabolism
3.
Gastroenterology ; 121(2): 435-9, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11487553

ABSTRACT

Bloom's syndrome (BS) is a rare recessive disorder caused by germline mutation of the BLM gene. Individuals with BS manifest growth retardation, immunodeficiency, and a predisposition to cancer. In this report, we describe an individual with BS and multiple colonic adenomas reminiscent of familial adenomatous polyposis coli (FAP). Molecular studies revealed APC mutations in 4 of 6 adenomas, including 2 adenomas with the identical APC mutation and microsatellite instability in 1 of 6 adenomas. These results demonstrate similar pathways to colorectal neoplasia in BS as in the normal population and suggest that individuals with BS may be particularly susceptible to colorectal neoplasia.


Subject(s)
Adenoma/pathology , Bloom Syndrome/pathology , Colonic Neoplasms/pathology , Adenoma/etiology , Adenoma/genetics , Adult , Bloom Syndrome/complications , Bloom Syndrome/genetics , Colonic Neoplasms/etiology , Colonic Neoplasms/genetics , Humans , Male , Microsatellite Repeats
4.
J Autism Dev Disord ; 31(2): 207-17, 2001 Apr.
Article in English | MEDLINE | ID: mdl-11450819

ABSTRACT

The Stress Survey Schedule is an instrument for measuring stress in the lives of persons with autism and other developmental disabilities. Development of the survey and analysis of the underlying measurement structure of the instrument is reported in three studies. Through the use of exploratory and confirmatory analysis procedures, eight dimensions of stress were identified: Anticipation/Uncertainty, Changes and Threats, Unpleasant Events, Pleasant Events, Sensory/Personal Contact, Food Related Activity, Social/Environmental Interactions, and Ritual Related Stress. These stress dimensions are highly relevant to the problems of autism and have not been addressed by other stress surveys. The information obtained from the Stress Survey can be used to plan for strategies to reduce the stress before it occurs or results in maladaptive behavior.


Subject(s)
Autistic Disorder/psychology , Developmental Disabilities/psychology , Psychiatric Status Rating Scales , Stress, Psychological/diagnosis , Adolescent , Adult , Autistic Disorder/complications , Child , Child, Preschool , Factor Analysis, Statistical , Female , Humans , Male , Middle Aged , Psychometrics
6.
J Biol Chem ; 276(32): 30031-5, 2001 Aug 10.
Article in English | MEDLINE | ID: mdl-11325959

ABSTRACT

Bloom's syndrome (BS) is a rare autosomal recessive disorder characterized by pre- and postnatal growth deficiency, immunodeficiency, and a tremendous predisposition to a wide variety of cancers. Cells from BS individuals are characterized by a high incidence of chromosomal gaps and breaks, elevated sister chromatid exchange, quadriradial formations, and locus-specific mutations. BS is the consequence of mutations that lead to loss of function of BLM, a gene encoding a helicase with homology to the RecQ helicase family. To delineate the role of BLM in DNA replication, recombination, and repair we used a yeast two-hybrid screen to identify potential protein partners of the BLM helicase. The C terminus of BLM interacts directly with MLH1 in the yeast-two hybrid assay; far Western analysis and co-immunoprecipitations confirmed the interaction. Cell extracts deficient in BLM were competent for DNA mismatch repair. These data suggest that the BLM helicase and MLH1 function together in replication, recombination, or DNA repair events independent of single base mismatch repair.


Subject(s)
Adenosine Triphosphatases/metabolism , Base Pair Mismatch , DNA Helicases/metabolism , DNA Repair , Neoplasm Proteins/metabolism , Adaptor Proteins, Signal Transducing , Adenosine Triphosphatases/chemistry , Blotting, Western , Carrier Proteins , Cell Line , Cell Nucleus/metabolism , Cells, Cultured , Child , DNA Helicases/chemistry , DNA Replication , HeLa Cells , Humans , K562 Cells , Male , MutL Protein Homolog 1 , Mutation , Nuclear Proteins , Precipitin Tests , Protein Binding , RecQ Helicases , Recombination, Genetic , Tumor Cells, Cultured , Two-Hybrid System Techniques
8.
J Neurosci Res ; 62(4): 491-502, 2000 Nov 15.
Article in English | MEDLINE | ID: mdl-11070492

ABSTRACT

The product of the neurofibromatosis type II (NF2) tumor suppressor gene, merlin, is closely related to the ezrin-radixin-moesin (ERM) family, a group of proteins believed to link the cytoskeleton to the plasma membrane. Mutation in the NF2 locus is associated with Schwann cell tumors (schwannomas). The two predominant merlin isoforms, I and II, differ only in the carboxy-terminal 16 residues and only isoform I is anti-proliferative. Merlin lacks an actin-binding domain conserved among ezrin, radixin and moesin. Because merlin, ezrin and moesin are co-expressed in Schwann cells, and all homodimerize, we have examined whether merlin and ezrin dimerize with one another. We found by immunoprecipitation and yeast two-hybrid assays that both merlin isoforms interact with ezrin. The interaction occurs in a head-to-tail orientation, with the amino-terminal half of one protein interacting with the carboxy-terminal half of the other. The two merlin isoforms behave differently in their interaction with ezrin. Isoform I binds only ezrin whose carboxy-terminus is exposed, whereas isoform II binds ezrin regardless of whether ezrin is in the open or closed conformation. The heterodimerization of merlin is a much stronger interaction than the interaction between either merlin isoform and ezrin, and can inhibit merlin-ezrin binding. This suggests that, in vivo, merlin dimerization could regulate merlin-ERM protein interaction, and could thus indirectly regulate other interactions involving ERM proteins.


Subject(s)
Cytoskeletal Proteins/genetics , Genes, Tumor Suppressor/physiology , Membrane Proteins/genetics , Neurofibromatosis 2/genetics , Phosphoproteins/genetics , Protein Isoforms/genetics , Animals , Animals, Newborn , Blood Proteins/genetics , Blood Proteins/metabolism , Cytoskeletal Proteins/metabolism , Humans , Membrane Proteins/metabolism , Microfilament Proteins/genetics , Microfilament Proteins/metabolism , Neurofibromatosis 2/metabolism , Neurofibromatosis 2/physiopathology , Neurofibromin 2 , Phosphoproteins/metabolism , Protein Isoforms/metabolism , Protein Structure, Tertiary/physiology , RNA, Messenger/metabolism , Rats , Schwann Cells/metabolism , Schwann Cells/pathology , Tumor Cells, Cultured
10.
Biochem Biophys Res Commun ; 273(1): 225-30, 2000 Jun 24.
Article in English | MEDLINE | ID: mdl-10873591

ABSTRACT

Guanylin is a pro-secretory hormone that is expressed in intestinal epithelia. Previously, we mapped the guanylin gene to mouse and human chromosomal regions containing multiple intestinal tumor-modifying loci. Here, we investigate whether guanylin expression is downregulated in precancerous human and mouse intestinal adenomas and whether diminished guanylin expression increases adenoma susceptibility in an animal model of intestinal cancer, the multiple intestinal neoplasia (Min) mouse. In situ hybridization analysis indicated diminished guanylin expression in both mouse and human adenomas. Northern analysis of mouse intestinal tissues showed strain-specific levels of guanylin expression but no correlation with the resistance or susceptibility of each strain to adenoma formation. Similarly, cDNA sequence analysis indicated no inactivating mutations or polymorphisms common to either the high or low adenoma-risk groups. Nonetheless, we have shown that significant loss of guanylin RNA in adenomas of mouse and human is a marker of intestinal epithelial cell transformation.


Subject(s)
Adenoma/genetics , Down-Regulation , Gastrointestinal Hormones , Gene Expression Regulation, Neoplastic , Intestinal Neoplasms/genetics , Peptides/genetics , Adenoma/pathology , Alleles , Animals , Colonic Neoplasms/genetics , Colonic Neoplasms/pathology , DNA Mutational Analysis , Disease Models, Animal , Epithelial Cells/metabolism , Epithelial Cells/pathology , Genes, APC/genetics , Genes, APC/physiology , Genetic Predisposition to Disease/genetics , Humans , In Situ Hybridization , Intestinal Neoplasms/pathology , Jejunum/metabolism , Mice , Mice, Inbred Strains , Mice, Mutant Strains , Mutation/genetics , Natriuretic Peptides , Polymorphism, Genetic/genetics , Precancerous Conditions/genetics , Precancerous Conditions/pathology , RNA, Messenger/genetics , RNA, Messenger/metabolism , Species Specificity
11.
J Clin Oncol ; 18(9): 1967-79, 2000 May.
Article in English | MEDLINE | ID: mdl-10784639

ABSTRACT

The adenomatous polyposis coli (APC) gene was first identified as the gene mutated in an inherited syndrome of colon cancer predisposition known as familial adenomatous polyposis coli (FAP). Mutation of APC is also found in 80% of all colorectal adenomas and carcinomas and is one of the earliest mutations in colon cancer progression. Similar to other tumor suppressor genes, both APC alleles are inactivated by mutation in colon tumors, resulting in the loss of full-length protein in tumor cells. The functional significance of altering APC is the dysregulation of several physiologic processes that govern colonic epithelial cell homeostasis, which include cell cycle progression, migration, differentiation, and apoptosis. Roles for APC in some of these processes are in large part attributable to its ability to regulate cytosolic levels of the signaling molecule beta-catenin and to affect the transcriptional profile in cells. This article summarizes numerous genetic, biochemical, and cell biologic studies on the mechanisms of APC-mediated tumor suppression. Mouse models of FAP, in which the APC gene has been genetically inactivated, have been particularly useful in testing therapeutic and chemopreventive strategies. These data have significant implications for colorectal cancer treatment approaches as well as for understanding other disease genes and cancers of other tissue types.


Subject(s)
Adenomatous Polyposis Coli/genetics , Colorectal Neoplasms/genetics , Genes, Tumor Suppressor , Genetic Predisposition to Disease , Trans-Activators , Adenomatous Polyposis Coli/pathology , Animals , Cell Cycle , Cell Differentiation , Colorectal Neoplasms/etiology , Cytoskeletal Proteins/biosynthesis , Cytoskeletal Proteins/metabolism , Disease Models, Animal , Disease Progression , Humans , Mice , Transcription, Genetic , beta Catenin
12.
Hum Genet ; 105(5): 388-98, 1999 Nov.
Article in English | MEDLINE | ID: mdl-10598803

ABSTRACT

Inherited mutations of the APC gene predispose carriers to multiple adenomatous polyps of the colon and rectum and to colorectal cancer. Mutations located at the extreme 5' end of the APC gene, however, are associated with a less severe disease known as attenuated adenomatous polyposis coli (AAPC). Many individuals with AAPC develop relatively few colorectal polyps but are still at high risk for colorectal cancer. We report here the identification of a 5' APC germline mutation in five separately ascertained AAPC families from Newfoundland, Canada. This disease-causing mutation is a single basepair change (G to A) in the splice-acceptor region of APC intron 3 that creates a mutant RNA without exon 4 of APC. The observation of the same APC mutation in five families from the same geographic area demonstrates a founder effect. Furthermore, the identification of this germline mutation strengthens the correlation between the 5' location of an APC disease-causing mutation and the attenuated polyposis phenotype.


Subject(s)
Adenomatous Polyposis Coli/genetics , Founder Effect , Genes, APC , Germ-Line Mutation , RNA Splicing/genetics , Adult , Aged , Base Sequence , DNA/genetics , DNA Primers/genetics , Emigration and Immigration , Exons , Female , Humans , Introns , Male , Middle Aged , Newfoundland and Labrador , Pedigree , Phenotype , Polymorphism, Single-Stranded Conformational , Reverse Transcriptase Polymerase Chain Reaction
13.
Am J Med Genet ; 84(4): 369-72, 1999 Jun 04.
Article in English | MEDLINE | ID: mdl-10340654

ABSTRACT

In this study we characterized clinically and evaluated molecularly a large family with maternally inherited hearing impairment. Relatives were evaluated audiologically and clinically, the most likely pattern of inheritance was deduced, and molecular DNA analysis for the known mitochondrial mutations associated with hearing impairment was performed. Clinical examination of several relatives showed a normal general state of health, but in 14 of the members tested variable degrees of sensorineural hearing loss were noted. The pedigree was established and demonstrated a clear pattern of maternal inheritance, with 34 of 38 offspring of deaf mothers being hearing impaired, but none of 22 offspring of deaf fathers having any hearing impairment. Since by far the most likely explanation of such a maternal inheritance pattern is a mitochondrial mutation, molecular testing for the three known mitochondrial mutations, A1555G, A7445G, and Cins7472, was performed on 27 of the relatives. All of the individuals tested had the normal sequence at the sites tested. This family with nonsyndromic sensorineural hearing loss has an inheritance pattern strongly suggestive of a mitochondrial mutation. However, molecular testing for the three known mitochondrial mutations associated with nonsyndromic hearing impairment was negative, implying that additional molecular defects can lead to the same phenotype. The search for this novel molecular defect is underway.


Subject(s)
Hearing Loss, Sensorineural/genetics , Mothers , Audiometry , DNA, Mitochondrial/genetics , Female , Hearing Loss, Sensorineural/physiopathology , Humans , Pedigree , Polymerase Chain Reaction
14.
Tumori ; 85(1): 28-31, 1999.
Article in English | MEDLINE | ID: mdl-10228493

ABSTRACT

AIMS AND BACKGROUND: The phenotypic expression of different APC mutations in familial adenomatous polyposis (FAP) is variable: two to three variants of the disease have been defined based on the severity of colonic manifestations. Age of onset and number of polypectomies per person-year of post-surgical follow-up were compared in two FAP families with very close mutation sites in the APC gene, in order to ascertain mutation-specific variation of expressivity. FAMILIES AND APC MUTATIONS: Family A (5 patients) carried a newly characterized mutation, a four bp deletion at codon 843. Family B (5 patients) carried a previously identified mutation at codon 835. RESULTS: Mean age of onset was 49.7 years in family A and 30.5 years in family B; number of polypectomies per person-year of follow-up was 1.05 for family A and 10.1 for family B (P < 0.001). CONCLUSIONS: There is significant variation of expressivity (allelic heterogeneity) in FAP between two mutations separated by only eight codons, located at the 5' extremity of APC gene exon 15.


Subject(s)
Adenomatous Polyposis Coli/genetics , Genes, APC/genetics , Mutation , Adenomatous Polyposis Coli/surgery , Age of Onset , Female , Humans , Male , Pedigree
15.
Am J Hum Genet ; 63(6): 1685-93, 1998 Dec.
Article in English | MEDLINE | ID: mdl-9837821

ABSTRACT

Bloom syndrome (BS) is more frequent in the Ashkenazic Jewish population than in any other. There the predominant mutation, referred to as "blmAsh," is a 6-bp deletion and 7-bp insertion at nucleotide position 2281 in the BLM cDNA. Using a convenient PCR assay, we have identified blmAsh on 58 of 60 chromosomes transmitted by Ashkenazic parents to persons with BS. In contrast, in 91 unrelated non-Ashkenazic persons with BS whom we examined, blmAsh was identified only in 5, these coming from Spanish-speaking Christian families from the southwestern United States, Mexico, or El Salvador. These data, along with haplotype analyses, show that blmAsh was independently established through a founder effect in Ashkenazic Jews and in immigrants to formerly Spanish colonies. This striking observation underscores the complexity of Jewish history and demonstrates the importance of migration and genetic drift in the formation of human populations.


Subject(s)
Adenosine Triphosphatases/genetics , Bloom Syndrome/genetics , DNA Helicases/genetics , Jews/genetics , Mutation , Alleles , Bloom Syndrome/ethnology , Christianity , Chromosomes, Human , Consanguinity , El Salvador , Founder Effect , Gene Frequency , Genotype , Haplotypes , Humans , Mexico , Polymerase Chain Reaction , Polymorphism, Genetic , RecQ Helicases , Spain/ethnology , United States
16.
Hum Mutat ; 12(2): 122-7, 1998.
Article in English | MEDLINE | ID: mdl-9671273

ABSTRACT

A method for concatenating exons from genomic DNA, thereby skipping large stretches of intron sequence, has been developed using the polymerase chain reaction (PCR) with primers based on known intron-exon junction sequences. The use of genomic DNA circumvents the need for cDNA preparation for many purposes, including cDNA construction and mutational analysis. This PCR method also facilitates the concatenation of nonconsecutive exons, allowing different (known or hypothetical) splice-forms to be amplified. We have used this technique to obtain concatamers of exons 3-9A of APC, a tumor suppressor gene that is mutated in sporadic colorectal cancers and in the germline of individuals with adenomatous polyposis coli. This method also facilitates the generation of any polymorphic derivative of a known sequence, even where the derivative differs from the available sequence at several positions.


Subject(s)
Exons/genetics , Genome , Introns/genetics , Open Reading Frames , Polymerase Chain Reaction/methods , Alternative Splicing , DNA Primers , Genes, APC , Polymorphism, Genetic
17.
Genes Chromosomes Cancer ; 22(4): 257-67, 1998 Aug.
Article in English | MEDLINE | ID: mdl-9669663

ABSTRACT

Chain-terminating germline APC mutations are responsible for adenomatous polyposis coli (APC). In the present work, we tested the hypothesis that germline APC mutations may be present in some patients with a milder phenotype, i.e., multiple synchronous colorectal adenomas. Eighteen patients with 3 or more colorectal adenomas at endoscopy (within a 6-month period) were ascertained from a series of subjects undergoing endoscopic examination. Their blood DNAs were analysed for the presence of germline mutations in the APC coding region by single-strand polymorphism analysis. Ten unrelated polyp-free subjects and 101 unrelated APC patients were used as controls in the molecular analyses. Five of the eighteen patients carried novel germline APC variants or rare polymorphisms. These were various in site (from the splice acceptor site of intron 7 to the end of exon 15) and type (splice-site, missense, and chain-terminating mutations). Only one of ten polyp-free individuals carried a silent APC variant and none of these variants was found in the 101 APC controls. A first- or second-degree family history of colorectal cancer was reported by 4 of the 5 patients carrying a germline APC variant. In conclusion, novel APC germline variants were detected in patients with multiple synchronous adenomas. This suggests that the development of sporadic adenomas, in some instances, is associated with the presence of minor germline variants of the APC gene and that the spectrum of germline APC functional mutations may be larger than previously thought.


Subject(s)
Adenoma/genetics , Colorectal Neoplasms/genetics , Genes, APC/genetics , Germ-Line Mutation/genetics , Neoplasms, Multiple Primary/genetics , Adult , Aged , Aged, 80 and over , Humans , Middle Aged , Polymorphism, Single-Stranded Conformational
18.
Genes Chromosomes Cancer ; 22(4): 278-86, 1998 Aug.
Article in English | MEDLINE | ID: mdl-9669665

ABSTRACT

APC mutations introduce premature stop codons into the open reading frame of the gene, leading to the formation of truncated tumor suppressor proteins. Both RNA and protein levels are likely to be profoundly altered by such nonsense mutations. To test this hypothesis, Western blotting and RT-PCR strategies were used to characterize mutant and normal APC protein and APC RNA concentrations in lymphoblastoid cell lines from 22 unrelated polyposis patients carrying different APC mutations. Variable levels of truncated APC peptides were observed in 14 of 14 cell lines with APC mutations within exon 15. No truncated APC protein was detected in six of eight cell lines with APC mutations located 5' of exon 15. Mutations located in exon 15 showed mutant RNA underrepresentation in four of eight cell lines, whereas mutations located 5' of exon 15 showed RNA reduction in five of six cell lines. These findings indicate that a two- to threefold decrease in RNA concentration is common when APC alleles carry chain-terminating mutations. They also suggest that the severe decrease of truncated APC protein observed in some cell lines is due to mechanisms acting at the protein level.


Subject(s)
Cytoskeletal Proteins/genetics , Genes, APC/genetics , Mutation/genetics , Peptide Chain Termination, Translational/genetics , RNA, Neoplasm/metabolism , Adenomatous Polyposis Coli Protein , Adolescent , Adult , Alternative Splicing/genetics , Cell Line, Transformed , Cytoskeletal Proteins/metabolism , Humans , Middle Aged , Tumor Cells, Cultured
19.
Hum Mutat ; 11(2): 175-8, 1998.
Article in English | MEDLINE | ID: mdl-9482582

ABSTRACT

Bloom's syndrome (BS) is a rare, autosomal recessive disease characterized by sun sensitivity, short stature, and predisposition to cancer. Although rare in the general population, BS is more common in the Ashkenazi Jewish population (German, 1993). The isolation of the gene for BS, known as BLM, has permitted the identification of mutations within the gene and the discovery that most BS individuals of Ashkenazi Jewish origin carry the identical 6-bp deletioin/7-bp insertion at position 2,281 of BLM (blmAsh). We have developed a rapid method for detecting blmAsh based on restriction enzyme digestion of a PCR product containing the mutation. blmAsh creates a restriction site within the amplified fragment allowing distinction of normal and mutant DNAs. This method has been designed for use with genomic DNA or cDNA.


Subject(s)
Adenosine Triphosphatases/genetics , Bloom Syndrome/genetics , DNA Helicases/genetics , DNA Mutational Analysis , Genetic Carrier Screening , Genetic Testing , Genotype , Humans , Jews , Polymorphism, Restriction Fragment Length , RecQ Helicases
20.
Oncogene ; 16(1): 77-82, 1998 Jan 08.
Article in English | MEDLINE | ID: mdl-9467945

ABSTRACT

The conventional protein isoform of the APC tumor suppressor is 310 kD and is encoded by exons 1 - 15 of the APC gene. Other RNAs are expressed from the APC gene and include one form that contains an exon upstream of exon 1, designated BS, but this transcript does not include exon 1. This transcript recently has been shown to be enriched in non-dividing, terminally-differentiated cells (Santoro and Groden, 1997). To determine if the BS-containing transcript encoded an alternate APC protein isoform, we generated and affinity-purified a polyclonal antibody directed to protein sequence predicted by exon BS. The BS antibody labeled a band of approximately 300 kD on immunoblots of cerebral and cerebellar tissue from adult human, baboon, rat and mouse. These same tissue lysates also contained prominent BS-reactive proteins of 290 kD, 200 kD and 150 kD. Lysates from mitotically active cells did not contain these APC isoforms. To verify that BS-reactive proteins were APC isoforms, BS-immunoprecipitates were blotted and labeled with commercially available APC antibodies. All four high molecular weight BS-antibody-precipitated proteins were recognized by antibodies directed against epitopes encoded by APC exons 2 and 15. BS isoforms were not, however, labeled with antibodies to an epitope encoded by APC exon 1, consistent with the prediction that BS - APC isoforms lack the domain encoded by these sequences. Like conventional APC, at least one of the four BS-APC protein isoforms also interacts with beta-catenin. BS-APC isoforms that lack exon 1-encoded sequences are incapable of dimerization with the conventional form of APC, yet retain the ability to bind beta-catenin. Such isoforms are likely to be functionally distinct from the conventional APC protein.


Subject(s)
Cytoskeletal Proteins/metabolism , Nervous System/metabolism , Trans-Activators , Adenomatous Polyposis Coli Protein , Animals , Cytoskeletal Proteins/chemistry , Cytoskeletal Proteins/genetics , Exons , Genes, APC , Humans , Isomerism , Mice , Precipitin Tests , Protein Binding , Rats , beta Catenin
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