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1.
Biomedicines ; 12(7)2024 Jul 19.
Article in English | MEDLINE | ID: mdl-39062188

ABSTRACT

The aim of this study was to identify key proteins of synaptic transmission in the cochlear nucleus (CN) that are involved in normal hearing, acoustic stimulation, and tinnitus. A gene list was compiled from the GeneCards database using the keywords "synaptic transmission" AND "tinnitus" AND "cochlear nucleus" (Tin). For comparison, two gene lists with the keywords "auditory perception" (AP) AND "acoustic stimulation" (AcouStim) were built. The STRING protein-protein interaction (PPI) network and the Cytoscape data analyzer were used to identify the top two high-degree proteins (HDPs) and their high-score interaction proteins (HSIPs), together referred to as key proteins. The top1 key proteins of the Tin-process were BDNF, NTRK1, NTRK3, and NTF3; the top2 key proteins are FOS, JUN, CREB1, EGR1, MAPK1, and MAPK3. Highly significant GO terms in CN in tinnitus were "RNA polymerase II transcription factor complex", "late endosome", cellular response to cadmium ion", "cellular response to reactive oxygen species", and "nerve growth factor signaling pathway", indicating changes in vesicle and cell homeostasis. In contrast to the spiral ganglion, where important changes in tinnitus are characterized by processes at the level of cells, important biological changes in the CN take place at the level of synapses and transcription.

2.
Cell Mol Neurobiol ; 43(8): 4189-4207, 2023 Nov.
Article in English | MEDLINE | ID: mdl-37736859

ABSTRACT

To study key proteins associated with changes in synaptic transmission in the spiral ganglion in tinnitus, we build three gene lists from the GeneCard database: 1. Perception of sound (PoS), 2. Acoustic stimulation (AcouStim), and 3. Tinnitus (Tin). Enrichment analysis by the DAVID database resulted in similar Gene Ontology (GO) terms for cellular components in all gene lists, reflecting synaptic structures known to be involved in auditory processing. The STRING protein-protein interaction (PPI) network and the Cytoscape data analyzer were used to identify the top two high-degree proteins (HDPs) and their high-score interaction proteins (HSIPs) identified by the combined score (CS) of the corresponding edges. The top two protein pairs (key proteins) for the PoS are BDNF-GDNF and OTOF-CACNA1D and for the AcouStim process BDNF-NTRK2 and TH-CALB1. The Tin process showed BDNF and NGF as HDPs, with high-score interactions with NTRK1 and NGFR at a comparable level. Compared to the PoS and AcouStim process, the number of HSIPs of key proteins (CS > 90. percentile) increases strongly in Tin. In the PoS and AcouStim networks, BDNF receptor signaling is the dominant pathway, and in the Tin network, the NGF-signaling pathway is of similar importance. Key proteins and their HSIPs are good indicators of biological processes and of signaling pathways characteristic for the normal hearing on the one hand and tinnitus on the other.


Subject(s)
Tinnitus , Humans , Tinnitus/metabolism , Spiral Ganglion , Brain-Derived Neurotrophic Factor/genetics , Brain-Derived Neurotrophic Factor/metabolism , Synaptic Transmission , Neurons/metabolism
3.
Neurotox Res ; 41(6): 571-588, 2023 Dec.
Article in English | MEDLINE | ID: mdl-37651081

ABSTRACT

Perinatal hypoxia is a common risk factor for CNS development. Using bioinformatics databases, a list of 129 genes involved in perinatal hypoxia was selected from the literature and analyzed with respect to proteins important for biological processes influencing the brain development. Functional enrichment analysis using the DAVID database was performed to identify relevant Gene Ontology (GO) biological processes like response to hypoxia, inflammatory response, positive and negative regulation of apoptosis, and positive and negative regulation of cell proliferation. The selected GO processes contain 17-30 proteins and show an enrichment of 6.3-14.3-fold. The STRING protein-protein interaction network and the Cytoscape data analyzer were used to identify interacting proteins playing a significant role in these processes. The two top protein pairs referring to the proteins with highest degrees and the corresponding proteins connected by high score edges exert opposite or regulatory functions and are essential for the balance between damaging, repairing, protective, or epigenetic processes. The GO response to hypoxia is characterized by the high score protein-protein interaction pairs CASP3/FAS promoting apoptosis and by the protective acting BDNF/MECP2 protein pair. Core components of the GO processes positive and negative regulation of apoptosis are the proteins CASP3/FAS/AKT/eNOS/RPS6KB1 involved in several signal pathways. The GO processes cell proliferation are characterized by the high-score protein-protein interaction pairs MYC/ MAPK1, JUN/MAPK1, IL6/IL1B, and JUN/HDAC1. The study provides new insights into the pathophysiology of perinatal hypoxia and is of importance for future investigations, diagnostics, and therapy of perinatal hypoxia.


Subject(s)
Hypoxia , Protein Interaction Maps , Humans , Caspase 3 , Molecular Docking Simulation
4.
Cell Mol Neurobiol ; 34(4): 523-38, 2014 May.
Article in English | MEDLINE | ID: mdl-24595552

ABSTRACT

Cells respond to injury and hypoxia by changing gene expression. To study how the main compartments of the cochlea, the stria vascularis (SV), the organ of Corti (OC), and the modiolus (MOD), respond to such stress, we analyzed the expression of selected genes using microarray analysis. Organotypic cultures of SV, OC, and MOD from newborn rats were used as an experimental model. In the present study, we compare the expression of a total of 50 genes involved in apoptosis and necrosis, reactive oxygen species (ROS) metabolism, inflammation as well as selected transcription factors (TF) and analyze their role for the different cell death patterns observed in the three regions. MOD, OC, and SV differ not only in their basal gene profiles but also in their ability to respond to injury and hypoxia. The results provide two coexpression clusters across the three regions, a Hif-1a coexpression cluster and a cluster around the cell death-associated transcripts Casp3, Capn1, Capn2, and Capns1. These clusters include the TF Jun, Bmyc, Nfyc, Foxd3, Hes1, the ROS-associated molecules Sod3, and Nos2, and the inflammatory chemokine Ccl20. The evidence of both clusters indicates the complex and regulated character of gene expression following injury and hypoxia across the three regions SV, OC, and MOD. The high vulnerability of spiral ganglion neurons in the MOD region, previously explained on the basis of the availability of neuro-trophic factors, is associated with the increased endogenous production of ROS and nitric oxide and inadequate activation of protective acting genes.


Subject(s)
Gene Expression/physiology , Organ of Corti/metabolism , Reactive Oxygen Species/metabolism , Stria Vascularis/metabolism , Transcription Factors/metabolism , Animals , Animals, Newborn , Cell Death/physiology , Cochlea/metabolism , Hypoxia/metabolism , Inflammation/metabolism , Organ Culture Techniques , Rats, Wistar
5.
Neurosci Lett ; 499(1): 52-6, 2011 Jul 15.
Article in English | MEDLINE | ID: mdl-21624428

ABSTRACT

Prestin is the motor protein of the outer hair cells of the organ of Corti and a key factor in ensuring a high sensitivity level of mammalian hearing. In the present study, we examined the effects of increased extracellular potassium (K(+)) concentration on the expression of prestin mRNA and the transcription factors Gata-3 and Carf in the organotypic culture of the organ of Corti of newborn rats. Mannitol and NaCl were used to analyze possible effects of hyperosmotic stress or ion-specific changes, respectively. An increase in prestin expression by a factor of 1.5-2.0 was seen in cultures grown in the presence of 5mM K(+). Potassium concentration of 35 and 55 mM induced a parallel decrease in prestin and Carf expression, but Gata-3 expression increased. Mannitol had no effect on gene expression whereas increased NaCl concentrations decreased prestin, but not Carf expression. The data suggest that chronic depolarization might decrease the prestin expression and possibly contribute to hearing loss and tinnitus.


Subject(s)
Anion Transport Proteins/antagonists & inhibitors , Anion Transport Proteins/genetics , Hair Cells, Auditory, Outer/physiology , Organ of Corti/growth & development , Organ of Corti/physiology , Potassium/physiology , Animals , Animals, Newborn , Anion Transport Proteins/metabolism , Hair Cells, Auditory, Outer/cytology , Hair Cells, Auditory, Outer/drug effects , Organ Culture Techniques , Organ of Corti/cytology , Potassium/metabolism , Rats , Sulfate Transporters , Time Factors
6.
Cell Mol Neurobiol ; 31(7): 1089-101, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21614551

ABSTRACT

Transcription factors (TFs) have a central role to play in regulating gene expression. To analyze the co-expression patterns of selected TFs with the motor protein prestin of the outer hair cells, we applied an real-time PCR approach combining several kinds of information: (i) expression changes during postnatal development, (ii) expression changes by exposure of organotypic cultures of the organ of Corti to factors which significantly affect prestin expression [thyroid hormone (T4), retinoic acid (RA), butyric acid (BA), increased KCl concentration] and (iii) changes along the apical-basal gradient. We found that the mRNA levels of the TF Brn-3c (Pou4f3), a member of the POU family, are significantly associated with the regulation of prestin during postnatal development and in cultures supplemented with T4 (0.5 µM), BA (0.5-2.0 mM), and high KCl (50 mM) concentration. The mRNA level of the constitutively active TF C/ebpb (CCAAT/enhancer binding protein beta) correlates positively with the prestin expression during postnatal development and in cultures exposed to T4 and RA (50-100 µM). The mRNA levels of the calcium-dependent TF CaRF correlates significantly with the prestin expression in cultures exposed to T4 and high KCl concentration. The observed coexpression patterns may suggest that the TFs Brn-3c, C/ebpb, and Carf contribute to regulating the expression of prestin under the investigated conditions.


Subject(s)
Anion Transport Proteins/metabolism , Gene Expression Regulation, Developmental , Transcription Factors/metabolism , Animals , Animals, Newborn , Anion Transport Proteins/genetics , Antineoplastic Agents/pharmacology , Butyric Acid/pharmacology , CCAAT-Enhancer-Binding Protein-beta/genetics , CCAAT-Enhancer-Binding Protein-beta/metabolism , Histamine Antagonists/pharmacology , Humans , Organ of Corti/anatomy & histology , Organ of Corti/drug effects , Organ of Corti/physiology , RNA, Messenger/genetics , RNA, Messenger/metabolism , Rats , Sp1 Transcription Factor/genetics , Sp1 Transcription Factor/metabolism , Sulfate Transporters , Tissue Culture Techniques , Transcription Factor Brn-3C/genetics , Transcription Factor Brn-3C/metabolism , Transcription Factors/genetics , Tretinoin/pharmacology
7.
Hear Res ; 277(1-2): 54-60, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21447374

ABSTRACT

Oxidative stress is an important mechanism inducing ototoxicity-, age- and noise-induced hearing loss. To better understand this phenomenon, we examined cochlear tissues for the expression of following genes involved directly or indirectly in the oxidative stress response: glyceraldehyde-3-phosphate dehydrogenase (Gapdh); solute carrier family-2 (facilitated glucose transporter), member-1 (Slc2a1); heme oxygenase-1 (Hmox1); heme oxygenase-2 (Hmox2); inducible nitric oxide synthase-2 (Nos2); transferrin (Tf); transferrin receptor (Tfrc); glutathione S-transferase A3 (Gsta3) and metallothionein-1a (Mt1a). Cochlear tissues were dissected from the p3-p5 Wistar rats, divided into the organ of Corti (OC), modiolus (MOD) and stria vascularis together with spiral ligament (SV + SL) and processed immediately or cultured under normoxic conditions or a short-term, mild hypoxia followed by re-oxygenation. After 24 h, explants were collected and total RNA isolated, transcribed and amplified in the real time RT-PCR. We found all genes listed above expressed in the freshly isolated cochlear tissues. In the OC and MOD, Slc2a1, Tf, and Mt1a were expressed on a lower level than in the SV + SL. In the OC, Hmox1 was expressed on a lower level than in the MOD and SV + SL. Hypoxic and normoxic cultures increased the transcript number of Gapdh, Slc2a1 and Hmox1 in all cochlear tissues. The expression of Nos2, Tf, Gsta3 and Mt1a increased in a tissue-specific manner. In the SV + SL, Mt1a expression decreased after normoxic and hypoxic conditions. Taken together, using real time RT-PCR, our results imply that oxidative stress may be an important component of cochlear injury during the developing period. In spite of the immaturity of the tissue, a differential response of antioxidant enzymes/proteins with respect to the pathway, the expression levels and regions was observed.


Subject(s)
Cochlea/metabolism , Oxidative Stress/genetics , RNA, Messenger/metabolism , Animals , Animals, Newborn , Cell Hypoxia , Cell Survival , Cochlea/pathology , Gene Expression Regulation , Rats , Rats, Wistar , Reverse Transcriptase Polymerase Chain Reaction , Time Factors , Tissue Culture Techniques
8.
Mol Cell Neurosci ; 47(4): 244-53, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21397696

ABSTRACT

The uncoupling protein 4 (UCP4) belongs to the mitochondrial anion transporter family. Protein tissue distribution and functions are still a matter of debate. Using an antibody we have previously shown that UCP4 appears in neurons and to a lesser extent in astrocytes of murine neuronal tissue as early as days 12-14 of embryonic development (Smorodchenko et al., 2009). Here we demonstrated for the first time that neurosensory cells such as hair cells of the inner ear and mechanosensitive Merkel cells in skin also express a significant amount of UCP4. We tested the hypothesis about whether UCP4 contributes to the regulation of oxidative stress using the model of oxygen deprivation. For this we compared the protein expression level in freshly isolated explants of organ of Corti, modiolus and stria vascularis from neonatal rats with explants cultured under hypoxia. Western blot analysis revealed that the UCP4 level was not increased under hypoxic conditions, when compared to the mitochondrial outer membrane protein VDAC or to the anti-oxidative enzyme SOD2. We moreover demonstrated that UCP4 expression is differently regulated during postnatal stages and is region-specific. We hypothesized that UCP4 may play an important role in functional maturation of the rat inner ear.


Subject(s)
Ear, Inner/physiology , Membrane Transport Proteins/metabolism , Mitochondria/metabolism , Animals , Cell Hypoxia , Ear, Inner/cytology , Hair Cells, Auditory/cytology , Hair Cells, Auditory/metabolism , Hair Cells, Vestibular/cytology , Hair Cells, Vestibular/metabolism , Mitochondrial Uncoupling Proteins , Neurons/cytology , Neurons/metabolism , Oxygen/metabolism , Rats , Rats, Wistar , Spiral Ganglion/cytology , Spiral Ganglion/metabolism , Voltage-Dependent Anion Channels/metabolism
9.
Dev Neurobiol ; 71(7): 650-61, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21344672

ABSTRACT

Prestin is the motor protein of the outer hair cells of the organ of Corti and a key factor in ensuring a high level of sensitivity of mammalian hearing. The factors that influence prestin expression are still largely unknown. We studied the effects of the application of retinoic acid, a ligand of a nuclear receptor, and of butyric acid, an inhibitor of histone deacetylase activity, on the expression of mRNA of prestin and Gata-3 in the organotypic culture of the organ of Corti of newborn rats using RT-PCR. Application of retinoic acid at concentrations of 1-50 µM results in a dose-dependent expression decrease after two days in culture. Treatment with sodium butyrate (0.5-2 mM) elevated the expression of prestin and Gata-3. Statistically significant correlations between Gata-3 and prestin mRNA levels were observed under all conditions. The data indicate that retinoid nuclear transcription factors, GATA-3 and histone acetylation/deacetylation processes may have a regulatory role to play in prestin expression.


Subject(s)
Anion Transport Proteins/biosynthesis , Butyric Acid/metabolism , GATA3 Transcription Factor/biosynthesis , Gene Expression Regulation/genetics , Organ of Corti/metabolism , Tretinoin/metabolism , Animals , Animals, Newborn , Anion Transport Proteins/genetics , Base Sequence , Binding Sites , Butyric Acid/pharmacology , GATA3 Transcription Factor/genetics , Gene Expression , Molecular Sequence Data , Organ Culture Techniques , Organ of Corti/drug effects , Promoter Regions, Genetic/genetics , Rats , Reverse Transcriptase Polymerase Chain Reaction , Sulfate Transporters , Tretinoin/pharmacology
10.
Hear Res ; 261(1-2): 9-21, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20006695

ABSTRACT

Based on observations that mutations of GATA-3 are responsible for the HDR-syndrome (hypoparathyroidism, deafness, renal defects) and that GATA-transcription factors have an important role to play in inner ear development, we hypothesized that these transcription factors may be involved in regulatory changes of prestin transcription. To prove this, we examined in parallel the expression of mRNA of prestin and Gata-3,-2 and Gata-1 in the organ of Corti during early postnatal development of rats and in organotypic cultures. Remarkable relations are observed between prestin and Gata-3,-2 expression in organ of Corti preparations in vivo and in vitro: (i) Gata-3,-2 expression display similar apical-basal gradients as prestin mRNA levels. (ii) The prestin expression increases between postnatal day two and postnatal day eight by a factor of about four in the apical and middle segments and by a factor of two in the basal part. Highly significant Pearson correlation coefficients were observed between Gata-3,-2 mRNA and prestin levels when the data were evaluated by regression analyses. (iii) Parallel changes of prestin mRNA and Gata-3,-2 mRNA levels were observed in response to thyroid hormone and to gemfibrozil application. These observations suggest a regulatory role played by the Gata-3,-2 transcription factors in prestin expression.


Subject(s)
Animals, Newborn/metabolism , Anion Transport Proteins/metabolism , GATA1 Transcription Factor/metabolism , GATA2 Transcription Factor/metabolism , GATA3 Transcription Factor/metabolism , Organ of Corti/metabolism , RNA, Messenger/metabolism , Animals , Anion Transport Proteins/genetics , Cells, Cultured , GATA1 Transcription Factor/genetics , GATA2 Transcription Factor/genetics , GATA3 Transcription Factor/genetics , Gemfibrozil/pharmacology , Hypolipidemic Agents/pharmacology , Lipid Metabolism/physiology , Organ of Corti/cytology , RNA, Messenger/drug effects , Rats , Regression Analysis , Sulfate Transporters
11.
J Negat Results Biomed ; 8: 3, 2009 Feb 17.
Article in English | MEDLINE | ID: mdl-19222841

ABSTRACT

BACKGROUND: Vardenafil (Levitra(R)) represents a potent and highly selective phosphodiesterase type 5 (PDE5) inhibitor, which is established for treatment of various diseases. There are several unpublished reports from patients stating that vardenafil has a considerable therapeutic effect on their concomitant tinnitus. This pilot study was conducted to specifically assess the effect of vardenafil in patients with chronic tinnitus. METHODS: This trial was based on a prospective, randomized, double-blind, placebo-controlled, parallel group design. Fourty-two consecutive subjects with mon- or binaural chronic tinnitus received 10 mg vardenafil (N = 21) or matching placebo tablets (N = 21) administered orally twice a day over a period of 12 weeks. Clinical examination and data acquisition took place at each visit: at baseline, after 4 weeks, after 12 weeks (end of treatment with study medication), and at non-medicated follow-up after 16 weeks. Assessment of clinical effectiveness was based on a standardized tinnitus questionnaire (TQ), the Short Form 36 health survey (SF-36), audiometric measurements (mode, pitch and loudness of tinnitus; auditory thresholds) and biomarkers of oxidative stress in patients' blood (malondialdehyde, protein carbonyl, homocysteine and total antioxidative status). Therapeutic efficacy was evaluated by comparison of subjective and objective parameters with baseline data between both treatment groups (ANCOVA). RESULTS: Vardenafil had no superior efficacy over placebo in the treatment of chronic tinnitus during this study. The primary efficacy criterion 'TQ total score' failed to demonstrate significant improvement compared to placebo. Subjective reports of TQ subscales and general quality of life areas (SF-36), objective audiometric examinations as well as investigated biomarkers for oxidative stress did not reveal any significant treatment effects. The safety profile was favorable and consistent with that in other vardenafil studies. CONCLUSION: Although hypoxia and ischemia play a special role in the pathogenesis of tinnitus, the PDE5-inhibitor-induced increase of nitric oxide-mediated vasodilatation exerted no specific influence on tinnitus symptomatology. Considering the unclear risk of rarely associated hearing impairment, systemic application of vardenafil or other PDE5 inhibitors prove to be not appropriate for therapy of chronic tinnitus.


Subject(s)
Imidazoles/administration & dosage , Phosphodiesterase Inhibitors/administration & dosage , Piperazines/administration & dosage , Tinnitus/drug therapy , Audiometry , Double-Blind Method , Female , Humans , Imidazoles/therapeutic use , Male , Middle Aged , Oxidative Stress , Phosphodiesterase Inhibitors/therapeutic use , Piperazines/therapeutic use , Prospective Studies , Sulfones/administration & dosage , Sulfones/therapeutic use , Tinnitus/metabolism , Triazines/administration & dosage , Triazines/therapeutic use , Vardenafil Dihydrochloride
12.
J Immunol Methods ; 336(2): 152-8, 2008 Jul 31.
Article in English | MEDLINE | ID: mdl-18501920

ABSTRACT

The aim of the present study was to analyze the relations between the serum anti-erythropoietin antibody (AEAb) levels and the antibodies' neutralizing activity in 20 patients with renal anemia and rhEPO-induced antibodies. AEAb levels were determined by the enzyme-linked immunosorbent assay (ELISA, double antigen-bridging) and by radioimmunoprecipitation assay (RIPA). The bone marrow neutralization test was used to determine the neutralizing activity of the antibodies. RIPA and ELISA data resulted in closely correlated measurements. The relations between AEAb levels and the neutralizing activity of the antibodies are variable as shown by follow-up and cross-sectional evaluations of the data. Serum samples with a high antibody level (>1000 ng/ml) are associated with 100% neutralizing activity, whereas serum samples with lower AEAb levels show partial neutralizing activities or have no effect. Determining the neutralizing activity might be helpful when it comes to deciding of whether or not rhEPO therapy should be continued, specifically in patients who have low antibody levels. The apparent affinity of the AEAb as defined by inhibition of the binding of rhEPO (IC(50)) did not change in the course of the disease, nor did it correlate to the AEAb levels or the neutralizing activities.


Subject(s)
Anemia/immunology , Antibodies/blood , Enzyme-Linked Immunosorbent Assay/methods , Erythropoietin/immunology , Kidney Diseases/immunology , Neutralization Tests/methods , Radioimmunoprecipitation Assay/methods , Adult , Aged , Aged, 80 and over , Anemia/blood , Antibodies/immunology , Antibody Affinity , Female , Humans , Male , Middle Aged , Recombinant Proteins , Renal Insufficiency/immunology
13.
Growth Factors ; 26(4): 180-91, 2008 Aug.
Article in English | MEDLINE | ID: mdl-19378418

ABSTRACT

We analyzed the mRNA expression of the insulin-like growth factor (IGF) family genes and of selected downstream pathway genes using the Affymetrix microarray system and confirmatory RT-PCR in the freshly prepared organ of Corti (OC), modiolus (MOD) and stria vascularis (SV) from neonatal rats (3-5 days old) and after 24h in culture. Among the seven members of the IGF family analyzed in this paper, IGF1, IGF2 and IGF-binding protein (IGFBP2) had the highest basal expression in all regions. Preparatory stress and culture increased the expression of IGF2, IGFBP2, IGFBP3, IGFBP5, glucose transporterl (GLUT1), signal transducer, and activator of transcription3 (STAT3), phosphoinositide-3-kinase regulatory subunit (Pik3r1), Jun oncogene (c-jun) and decreased that of mitogen-activated protein kinases MAPK3 and MAPK14 in all regions. Region-specific changes were observed in OC (GLUT1), MOD (IGFBP3 and c-jun) and SV (IGF2 and IGFBP2).


Subject(s)
Cochlea/metabolism , Insulin-Like Growth Factor Binding Proteins/metabolism , Organ of Corti/metabolism , RNA, Messenger/analysis , Stria Vascularis/metabolism , Animals , Animals, Newborn , Cells, Cultured , Cochlea/chemistry , Insulin-Like Growth Factor Binding Proteins/genetics , Organ Culture Techniques , Organ of Corti/chemistry , RNA, Messenger/genetics , RNA, Messenger/metabolism , Rats , Rats, Wistar , Stria Vascularis/chemistry , Time Factors
14.
Otolaryngol Head Neck Surg ; 137(6): 950-2, 2007 Dec.
Article in English | MEDLINE | ID: mdl-18036427

ABSTRACT

OBJECTIVE: To evaluate in vitro the effect of coenzyme Q10 (CoQ(10)) on ischemia-induced hair cell death. STUDY DESIGN: Organotypic cochlear cultures of newborn rats were subjected to ischemia with and without CoQ(10). RESULTS: Addition of CoQ(10) has not prevented HC loss. CONCLUSION: CoQ(10) seems to protect against only certain modes of cell death.


Subject(s)
Electron Transport Chain Complex Proteins/pharmacology , Hair Cells, Auditory/drug effects , Ischemia/physiopathology , Protective Agents/pharmacology , Ubiquinone/analogs & derivatives , Animals , Animals, Newborn , Carbon Dioxide/pharmacology , Cell Death/drug effects , Cell Survival/drug effects , Coenzymes/pharmacology , Nitrogen/pharmacology , Organ Culture Techniques , Perilymph/physiology , Rats , Rats, Wistar , Ubiquinone/pharmacology
15.
Brain Res ; 1162: 56-68, 2007 Aug 08.
Article in English | MEDLINE | ID: mdl-17612509

ABSTRACT

Cell death in the inner ear tissues is an important mechanism leading to hearing impairment. Here, using microarrays and real-time RT-PCR we analyzed expression of selected apoptosis-related genes in rat's inner ear. We determined the gene expression in tissues freshly isolated from neonatal rats (3-5 days old) and compared it to that of explants cultured for 24 h under normoxic or hypoxic conditions. For the analyses, we used pooled samples of the organ of Corti (OC), modiolus (MOD) and stria vascularis (SV), respectively. We observed region-specific changes in gene expression between the fresh tissues and the normoxic culture. In the OC, expression of the proapoptotic genes caspase-2, caspase-3, caspase-6 and calpain-1 was downregulated. In the MOD, the antioxidative defense SOD-2 and SOD-3 were upregulated. In the SV, caspase-2, caspase-6, calpain-1 and SOD-3 were downregulated and SOD-2 upregulated. We speculate that these changes could reflect survival shift in transcriptome of inner ear explants tissues under in vitro conditions. With the exception of SOD-2, hypoxic culture conditions induced the same changes in gene expression as the normoxic conditions indicating that culture preparation is likely the dominating factor, which modifies the gene expression pattern. We conclude that various culture conditions induce different expression pattern of apoptosis-related genes in the organotypic cochlear cultures, as compared to fresh tissues. This transcriptional pattern may reflect the survival ability of specific tissues and could become a tempting target for a pharmacological intervention in inner ear diseases.


Subject(s)
Apoptosis Regulatory Proteins/metabolism , Cochlea/growth & development , Cochlea/metabolism , Gene Expression Regulation, Developmental/physiology , Analysis of Variance , Animals , Animals, Newborn , Apoptosis Regulatory Proteins/genetics , Cochlea/anatomy & histology , Hypoxia/metabolism , Hypoxia/pathology , Hypoxia/physiopathology , Oligonucleotide Array Sequence Analysis/methods , Organ Culture Techniques , Organ of Corti/growth & development , RNA, Messenger/metabolism , Rats , Rats, Wistar , Reverse Transcriptase Polymerase Chain Reaction/methods , Stria Vascularis/metabolism
16.
Hear Res ; 231(1-2): 73-83, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17592749

ABSTRACT

Prestin is the motor protein of the outer hair cells (OHCs) and is required for both their electromotility and for cochlear amplification. We investigated the prestin mRNA expression in guinea pigs and rats in relation to the degree of noise-induced hearing loss (NIHL) induced by unilateral impulse noise exposure (167dB peak SPL) for 2.5-5 min. Distortion product otoacoustic emissions (DPOAE) and auditory brainstem responses were recorded before and one week post exposure. Prestin mRNA was examined by quantitative reverse transcription-polymerase chain reaction. Either the whole organs of Corti or the apical, middle and basal parts were examined separately. The specimens were pooled and grouped according to the degree of NIHL measured in the exposed ears. In rats, the number of hair cells was counted. A clear base-to-apex gradient in the prestin mRNA expression was found to exist in guinea pig and rat controls. In both species, there was an increase in the number of prestin RNA transcripts at a mean NIHL of about 15-25 dB indicating an up-regulation in the remaining intact cells. In rats, this degree of NIHL corresponded to an OHC loss of about 40%. Interestingly, the contralateral ears also revealed an up-regulation of prestin mRNA accompanied by significant DPOAE improvements.


Subject(s)
Noise , Otoacoustic Emissions, Spontaneous , Proteins/metabolism , Up-Regulation , Animals , Brain Stem/metabolism , Female , Guinea Pigs , Hair Cells, Auditory/metabolism , Hearing Loss , Male , Pressure , RNA, Messenger/metabolism , Rats , Rats, Wistar
17.
Otolaryngol Head Neck Surg ; 136(1): 72-7, 2007 Jan.
Article in English | MEDLINE | ID: mdl-17210337

ABSTRACT

OBJECTIVE: To determine the short-term effects of coenzyme Q10 (CoQ10) on the antioxidative status and tinnitus expression in patients with chronic tinnitus aurium. STUDY DESIGN: A 16-week prospective nonrandomized clinical trial (n = 20). Tinnitus and Short Form-36 Questionnaires (TQ/SF-36) were evaluated together with the plasma concentrations of CoQ10, malondialdehyde, and the total antioxidant status. RESULTS: The mean plasma CoQ10 concentration rose under external CoQ10 supply and remained elevated after medication stopped without overall effects on the tinnitus score. However, in a subgroup of 7 patients with low initial plasma CoQ10 concentration and significant increase in the plasma CoQ10 level, a clear decrease in the TQ score was observed. CONCLUSION: In patients with a low plasma CoQ10 concentration, CoQ10 supply may decrease the tinnitus expression. SIGNIFICANCE: This is the first study to examine the effect of CoQ10 in chronic tinnitus aurium.


Subject(s)
Antioxidants/therapeutic use , Electron Transport Chain Complex Proteins/therapeutic use , Tinnitus/drug therapy , Ubiquinone/analogs & derivatives , Adult , Aged , Antioxidants/analysis , Chronic Disease , Coenzymes , Electron Transport Chain Complex Proteins/blood , Female , Health Status Indicators , Humans , Male , Malondialdehyde/analysis , Middle Aged , Prospective Studies , Tinnitus/psychology , Ubiquinone/blood , Ubiquinone/therapeutic use
18.
J Immunol Methods ; 313(1-2): 176-82, 2006 Jun 30.
Article in English | MEDLINE | ID: mdl-16740273

ABSTRACT

Sensitive and efficient methods for detecting anti-erythropoietin (anti-EPO) antibodies are needed for analysis and, above all, for large scale screening of human serum samples. ELISA is an attractive alternative to labor-intensive radioimmunoprecipitation assays but apparently conflicting reports question its sensitivity. We sought to resolve this issue by directly comparing different reported ELISA approaches to determine whether rhEPO-coating methods affect detection of anti-EPO antibodies. Investigators reporting low sensitivity had used ELISAs in which rhEPO was directly coated to microtiter plates while the high sensitivity ELISA used plate-bound streptavidin to bind biotinylated rhEPO. Using anti-EPO positive human sera, our results confirmed a large (100- to 300-fold) difference in sensitivity between the ELISAs and suggested that the inferiority of the low sensitivity ELISA was caused by the direct coating of rhEPO which may disrupt epitopes by masking recognition sites or introducing conformational changes. Thus, a bridging ELISA can be an appropriate and effective system for antibody analysis and screening of human sera with high sensitivity and specificity but only if performed with streptavidin binding of biotinylated antigen. This finding may also be more generally applicable to the detection of antibodies against other protein antigens.


Subject(s)
Antibodies/analysis , Erythropoietin/immunology , Serum/chemistry , Streptavidin/chemistry , Antibodies/immunology , Binding, Competitive , Biotinylation , Calibration , Enzyme-Linked Immunosorbent Assay/methods , Erythropoietin/chemistry , Humans , Recombinant Proteins , Reproducibility of Results , Serum/immunology
19.
Hear Res ; 215(1-2): 31-8, 2006 May.
Article in English | MEDLINE | ID: mdl-16678987

ABSTRACT

Several studies indicate that an increase in the extracellular potassium (K+) concentration is a factor exerting a damaging effect on cochlear hair cells (HCs). The present study was designed to examine the effects of high extracellular K+ concentrations on the HCs under normoxic and ischemic conditions. Organotypic cultures of the organ of Corti of newborn rats were exposed to normoxia and ischemia at K+ concentrations of 5-70 mM in artificial perilymph for 3-4h. The number of IHCs and OHCs in the apical, medial and basal parts of the cochlea were counted 24h later. The work resulted in two main findings: (1) extracellular K+ concentrations of 30-70 mM had no effect on the HCs under normoxic conditions; (2) under ischemic conditions, a clear HC loss, mainly in the medial and basal cochlear parts, was observed at 5 mM K+ as previously reported. In contrast, a high extracellular K+ concentration strongly attenuated the HC loss. This effect nearly completely disappeared by the addition of both eosin, an inhibitor of the plasma membrane calcium ATPase (PMCA), and linopirdine, an inhibitor of the KCNQ4 channel, indicating that a normal activity of the PMCA and the KCNQ4 channels are key factors for HC survival under ischemia and depolarizing conditions.


Subject(s)
Hair Cells, Auditory/pathology , Ischemia/pathology , Potassium Channels/metabolism , Potassium/metabolism , Animals , Animals, Newborn , Calcium/metabolism , Calcium-Transporting ATPases/metabolism , Hair Cells, Auditory/drug effects , Hair Cells, Auditory/metabolism , Indoles/pharmacology , KCNQ Potassium Channels/antagonists & inhibitors , KCNQ Potassium Channels/metabolism , Organ Culture Techniques , Potassium Channel Blockers/pharmacology , Potassium Channels, Voltage-Gated/metabolism , Pyridines/pharmacology , Rats , Rats, Wistar , Sodium-Calcium Exchanger/antagonists & inhibitors , Thiourea/analogs & derivatives , Thiourea/pharmacology
20.
Free Radic Res ; 40(5): 495-505, 2006 May.
Article in English | MEDLINE | ID: mdl-16551576

ABSTRACT

Oxidative damage accumulation in macromolecules has been considered as a cause of cellular damage and pathology. Rarely, the oxidative stress parameters in healthy humans related to the individual age have been reported. The purpose of this study was to examine the redox status in plasma and erythrocytes of healthy individuals and determine correlations between these parameters and the aging process. The following parameters were used: malondialdehyde (MDA), protein carbonyls (PCO), 4-hydroxy-2,3-trans-nonenal (HNE), reduced glutathione (GSH), glutathione disulfide (GSSG) and uric acid (UA) in blood and plasma samples of 194 healthy women and men of ages ranging from 18 to 84 years. The results indicate that the balance of oxidant and antioxidant systems in plasma shifts in favor of accelerated oxidation during ageing. That is demonstrated by increases of MDA, HNE, GSSG and by the slight decrease of erythrocytic GSH with age. As the content of UA is more determined by metabolic and nutritional influences than by the balance between prooxidants and antioxidants there was no significant age-related change observed. For plasma concentrations of HNE the first time age-dependent reference values for healthy humans are presented.


Subject(s)
Aging , Erythrocytes/metabolism , Oxidative Stress/physiology , Plasma/metabolism , Adolescent , Adult , Aged , Aged, 80 and over , Aldehydes/blood , Biomarkers/blood , Female , Glutathione/blood , Glutathione Disulfide/blood , Humans , Male , Malondialdehyde/blood , Middle Aged , Oxidation-Reduction , Protein Carbonylation/physiology , Sex Factors , Uric Acid/blood
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