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1.
Front Genet ; 15: 1372309, 2024.
Article in English | MEDLINE | ID: mdl-38756448

ABSTRACT

The cool temperate origin of gymnosperm Taxus species in East Asia is specifically diverse and widespread. Certain lineages have managed to extend their distribution further south to subtropical and tropical islands such as Taiwan and the Philippines. To address questions including whether these insular lineages, recently identified as T. phytonii, have become genetically distinct from each other and from their continental relatives, and when and how they colonized their residing islands, we sampled over 11 populations, covering 179 Taxus individuals from Taiwan and the Philippines. Using four cpDNA and one nuclear marker, we showed in population genetic and genealogical analyses that the two insular lineages were genetically distinct from each other and also from other continental Taxus and that they represented each other's closest relative. Estimated with the coalescent-based multi-type tree (MTT) analyses, we inferred an origin of Taiwanese T. phytonii more ancient than 2.49 Mya and that of Philippine T. phytonii more ancient than 1.08 Mya. In addition, the divergence demographic history revealed by both MTT and isolation with migration (IM) analyses indicated the presence of recent post-split migrations from a continental taxon, T. mairei, to Taiwanese T. phytonii, as well as from Taiwanese T. phytonii to Philippine T. phytonii. Overall, this study suggests Taiwan as a stepping stone through which the temperate-origin yew trees can extend their distributions to tropical regions such as the Philippines.

2.
Biodivers Data J ; (7): e31638, 2019.
Article in English | MEDLINE | ID: mdl-30804702

ABSTRACT

The recent extensive survey conducted in the Pantabangan-Carranglan Watershed, located in the Caraballo Mountain Range during the rainy season (October to November) resulted in the recording of fifty-nine (59) species of amphibians and reptiles (17 frogs, 14 skinks, 3 agamids, 6 gekkonid lizards, 2 varanids and 17 snakes). Out of 59 species, 42 species were Philippine endemics and 25 species are recorded only from the Luzon faunal region. Habitat analysis and mapping showed seven habitat types including lowland dipterocarp forest, grassland, lower montane forest, upper montane forest, pine forest, agricultural areas and riparian habitats. GIS-based distribution mapping showed that the number of individuals and species are high in forest and associated riparian habitats at mid-elevation (1,000-1,250 m a.s.l.). The distribution pattern in the area is influenced by similarity in microclimatic conditions, availability of resources and niches which species can utilise. Species diversity is centred in mid- to high elevation forest and riparian habitats and in less disturbed areas. Snake diversity is adversely affected by increased disturbance, making them good indicators of the health of an area. The abundance-based Jaccard's Similarity Index showed that connected habitats and elevation gradients have higher species similarity.

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