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1.
PLoS One ; 19(4): e0293861, 2024.
Article in English | MEDLINE | ID: mdl-38603714

ABSTRACT

The goal of this study was to characterize the bacterial diversity on different melon varieties grown in different regions of the US, and determine the influence that region, rind netting, and variety of melon has on the composition of the melon microbiome. Assessing the bacterial diversity of the microbiome on the melon rind can identify antagonistic and protagonistic bacteria for foodborne pathogens and spoilage organisms to improve melon safety, prolong shelf-life, and/or improve overall plant health. Bacterial community composition of melons (n = 603) grown in seven locations over a four-year period were used for 16S rRNA gene amplicon sequencing and analysis to identify bacterial diversity and constituents. Statistically significant differences in alpha diversity based on the rind netting and growing region (p < 0.01) were found among the melon samples. Principal Coordinate Analysis based on the Bray-Curtis dissimilarity distance matrix found that the melon bacterial communities clustered more by region rather than melon variety (R2 value: 0.09 & R2 value: 0.02 respectively). Taxonomic profiling among the growing regions found Enterobacteriaceae, Bacillaceae, Microbacteriaceae, and Pseudomonadaceae present on the different melon rinds at an abundance of ≥ 0.1%, but no specific core microbiome was found for netted melons. However, a core of Pseudomonadaceae, Bacillaceae, and Exiguobacteraceae were found for non-netted melons. The results of this study indicate that bacterial diversity is driven more by the region that the melons were grown in compared to rind netting or melon type. Establishing the foundation for regional differences could improve melon safety, shelf-life, and quality as well as the consumers' health.


Subject(s)
Bacillaceae , Cucumis melo , Cucurbitaceae , United States , Cucurbitaceae/microbiology , Cucumis melo/microbiology , RNA, Ribosomal, 16S/genetics , Bacteria/genetics , Enterobacteriaceae
2.
iScience ; 27(1): 108605, 2024 Jan 19.
Article in English | MEDLINE | ID: mdl-38174319

ABSTRACT

An unprecedented strategy for preparing a series of sulfur ylides through electro-oxidative quinylation of sulfides in batch and continuous flow has been developed. Good to excellent yields were obtained with excellent functional group compatibility and good concentration tolerance under exogenous oxidant- and transition metal-free conditions. Advantageously, this electrosynthesis methodology was scalable with higher daily production and steady production was achieved attributing to the use of micro-flow cells.

3.
Chem Sci ; 14(9): 2461-2466, 2023 Mar 01.
Article in English | MEDLINE | ID: mdl-36873849

ABSTRACT

A conceptually new methodology to give unusual cyclization products from usual migration substrates was disclosed. The highly complex and structurally important and valuable spirocyclic compounds were produced through radical addition, intramolecular cyclization and ring opening instead of usual migration to the di-functionalization products of olefins. Furthermore, a plausible mechanism was proposed based on a series of mechanistic studies including radical trapping, radical clock, verification experiments of intermediates, isotope labeling and KIE experiments.

4.
J Food Prot ; 85(2): 220-230, 2022 02 01.
Article in English | MEDLINE | ID: mdl-34648634

ABSTRACT

ABSTRACT: Production of value-added foods is of growing interest to small-scale produce growers. However, previous studies reported that they lack sufficient food safety awareness and have limited knowledge of applicable food safety regulations. Targeted food safety education can help to address these challenges. This study used focus groups and a combination of Web-based and printed surveys to evaluate growers' attitudes toward and knowledge of value-added business and to assess their food safety education needs. In total, 136 Indiana produce growers participated in the study, including 38 focus group participants and 98 survey participants. Overall, growers were aware of the importance of food safety, with 78% of the survey participants agreeing strongly that food safety was a top priority in value-added businesses. Most survey participants (82%) self-reported being knowledgeable about food safety. Most were confident in their ability to run a successful value-added business. The top two barriers that hindered growers from learning about food safety were time limitations and an overwhelming amount of information. Growers preferred to receive additional educational materials on selling non-home-based vendor products, communication strategies with regulators and inspectors, and marketing strategies; they trusted the information from extension educators and university extension publications the most. This study guides the development of future food safety education programs for small-scale growers who are interested in establishing a value-added business.


Subject(s)
Attitude , Food Safety , Focus Groups , Humans , Needs Assessment , Surveys and Questionnaires
5.
J Nutr ; 151(6): 1591-1596, 2021 06 01.
Article in English | MEDLINE | ID: mdl-33693698

ABSTRACT

BACKGROUND: The coronavirus disease 2019 (COVID-19) has quickly spread across the world. However, the nutritional status of COVID-19 patients has not yet been extensively examined. OBJECTIVES: The aim of this study was to evaluate the nutritional status of COVID-19 patients and to identify factors independently associated with malnutrition risk. METHODS: In this single-center, cross-sectional study, we analyzed data from 760 hospitalized COVID-19 patients between 29 January 2020 and 15 March 2020. Based on the Nutrition Risk Screening (NRS) 2002 score, we divided patients into the normal nutrition group (NRS score <3) and the malnutrition risk group (NRS score ≥3). The associations of age, gender, symptoms, comorbidities, BMI, serum albumin and prealbumin concentrations, disease severity, activities of daily living (ADL) score, and clinical outcomes with malnutrition risk were analyzed. Multivariable logistic regression analysis was used to identify independent factors associated with malnutrition risk. RESULTS: Of patients with COVID-19, 82.6% were at risk of malnutrition. There were statistical differences in the age, incidence of fever, BMI, serum albumin and prealbumin concentrations, ADL score, and disease severity between the 2 groups. Multivariable logistic regression analysis revealed that age ≥65 y (vs. <65 y; OR: 5.40; P < 0.001), serum albumin <35 g/L (vs. ≥35 g/L; OR: 3.61; P < 0.001), serum prealbumin <150 mg/L (vs. ≥150 mg/L; OR: 2.88; P = 0.042), critical cases (vs. moderate cases; OR: 4.46; P < 0.001), ADL score 41-60 (vs. ADL score 100; OR: 4.50; P = 0.012), and ADL score ≤40 (vs. ADL score 100; OR: 9.49; P < 0.001) were significantly associated with the risk of malnutrition in COVID-19 patients. CONCLUSIONS: This study showed that prevalence of malnutrition risk was high in COVID-19 patients. Older age, low serum albumin and prealbumin concentrations, ADL score <60, and disease severity were independent factors associated with malnutrition risk.


Subject(s)
COVID-19/complications , Malnutrition/epidemiology , Aged , COVID-19/epidemiology , COVID-19/virology , China/epidemiology , Cross-Sectional Studies , Female , Humans , Male , Malnutrition/complications , Middle Aged , Nutrition Assessment , Nutritional Status , Risk Factors , SARS-CoV-2/isolation & purification
6.
J Sci Food Agric ; 95(14): 2989-95, 2015 Nov.
Article in English | MEDLINE | ID: mdl-25512001

ABSTRACT

BACKGROUND: Soilborne disease management remains a great challenge in melon production with the phaseout of soil fumigant methyl bromide. Grafting has been shown to be an effective approach to control soilborne diseases. However, previous research has yielded mixed results regarding the impacts of rootstock on fruit quality. Very few studies have assessed melon quality attributes using both sensory evaluation and instrumental methods. RESULTS: Galia melon 'Arava' (Cucumis melo L. var. reticulatus Ser.) and honeydew melon 'Honey Yellow' (C. melo L. var. inodorus Naud.) were grafted onto commercial hybrid squash (Cucurbita maxima Duchesne × Cucurbita moschata Duchesne) rootstocks and root-knot nematode-resistant Cucumis metulifer E. Mey. ex Naud. rootstock. The grafting combinations were evaluated under different production conditions. Grafting with hybrid squash rootstocks resulted in reduced soluble solids content (SSC) and decreased sensory ratings of 'Arava' fruit. By contrast with grafted 'Arava', grafted 'Honey Yellow' did not exhibit significant differences in sensory properties and instrumental measurements regardless of production conditions and rootstock selection. CONCLUSION: The effects of grafting on fruit quality attributes differed between the two distinctive types of melon scion used. Potential negative impacts of rootstocks on melon fruit quality need to be considered in the selection and use of disease-resistant rootstocks.


Subject(s)
Agriculture/methods , Cucumis , Cucurbita , Disease Resistance , Fruit , Plant Roots , Taste , Cucumis melo , Cucurbitaceae/genetics , Fruit/standards , Hardness , Humans , Plant Diseases , Soil , Soil Microbiology , Species Specificity
7.
Wei Sheng Wu Xue Bao ; 51(1): 29-34, 2011 Jan.
Article in Chinese | MEDLINE | ID: mdl-21465786

ABSTRACT

OBJECTIVE: To better reveal the functions of key members involved in cyclic di-GMP signal metabolism pathways in the bacterial blight pathogen of rice Xanthomonas oryzae pv. oryzae (Xoo). METHODS: vieAxoo (PXO 04753), a gene putatively encoding the EAL domain proteins was investigated by gene deletion mutation using the marker exchange, complementation and phenotypic analysis. RESULT: The sequence of vieAxoo cloned from genomic DNA of the wild-type strain PXO99(A) was found to be highly conserved in plant-pathogenic Xanthomonas spp. VieAxoo was structurally featured with EAL and REC domains. No significant changes in virulence to rice, EPS production and flagellar motility were found in deltavieAxoo compared to PXO99(A), whereas remarkable changes in induction of hypersensitive responses (HR) in tobacco and biofilm formation were observed. CONCLUSION: VieAxoo might function as an important reponse regulator in cyclic di-GMP signaling and regulation of bacterial induction of HR and biofilm formation of Xoo.


Subject(s)
Bacterial Proteins/chemistry , Bacterial Proteins/metabolism , Gene Deletion , Xanthomonas/physiology , Bacterial Proteins/genetics , Biofilms , Oryza/microbiology , Plant Diseases/microbiology , Protein Structure, Tertiary , Virulence , Xanthomonas/genetics , Xanthomonas/pathogenicity
8.
Wei Sheng Wu Xue Bao ; 49(1): 32-7, 2009 Jan.
Article in Chinese | MEDLINE | ID: mdl-19388261

ABSTRACT

OBJECTIVE: To better understand the mechanisms of cyclic di-GMP signaling in Xanthomonas oryzae pv. oryzae (Xoo),the casual pathogen of bacterial blight of rice, molecular identification of Clpxoo. METHODS: A putative signal receptor protein was performed through gene cloning, sequencing and deletion analysis. RESULTS: Sequence analysis showed Clpxoo was a homologue of Crp and Vfr, the cAMP receptor proteins in Escherichia coli and Pseudomonas aeruginosa respectively, which had the cNMP-binding domains (CAP_ED) at N terminal and the DNA-binding domains (HTH_CRP) at C terminal and is highly conserved in the plant-pathogenic Xanthomonas spp. We constructed delta clpxoo through a double crossover recombination and validated by PCR assay, delta clpxoo displayed the reduced motility and extracellular polysaccharide (EPS) production, and increased sensitive to H2O2 toxicity compared with PXO99(A). All these phenotype changes could be partly restored through complementation of mutants by introducing clpxoo. Moreover, we observed no significant changes in production of extracellular cellulase and xylanase in vitro, biofilm formation and induction of hypersensitive response (HR) on non-host tobacco in delta clpxoo compared to PXO99(A). CONCLUSION: Therefore, Clpxoo played a role as one of the global regulator in regulation of flagellar motility, EPS production and H2O2 resistance.


Subject(s)
Hydrogen Peroxide/toxicity , Oryza/microbiology , Xanthomonas/drug effects , Amino Acid Sequence , Data Collection , Genes, Bacterial , Molecular Sequence Data , Mutation , Plant Diseases/microbiology , Sequence Homology, Amino Acid , Virulence Factors , Xanthomonas/genetics , Xanthomonas/pathogenicity
9.
Ying Yong Sheng Tai Xue Bao ; 19(3): 667-73, 2008 Mar.
Article in Chinese | MEDLINE | ID: mdl-18533542

ABSTRACT

In this paper, four feeding treatments including continuous feeding (SR00), recycling of 2 days starvation and 2 days refeeding (SR22), recycling of 7 days starvation and 2 days refeeding (SR72), and recycling of 7 days starvation and 7 days refeeding (SR77) were designed, and the feeding treatments were quantified as two treatment factors, i. e., starvation stress (SS) and starvation frequency (CF). Combining these two factors with the factors dry matter feed intake (FI), body weight (BW), water temperature (TE), water salinity (SA), water pH (PH) and growth time (GT), three BP artificial neural networks were constructed to predict the weight gain (WG), specific growth rate (SGR), and feed conversion ratio (FCR) of Lateolabrax japonicus, respectively. The results showed that the WG, SGR and FCR of L. japonicus were significantly affected by different feeding treatments. Throughout a 8-week trial, the WG and SGR of starved fish couldn't catch up to those of control fish. Except for SR72 group whose FCR was markedly higher than that of control group, no differences in FCR were observed between control group and experimental groups SR22 and SR77. The study also indicated that artificial neural network could well predict WG and SGR, but was unavailable for FCR. Among the eight factors, FI, SS, CF and GT had significant contributions to both WG and SGR. Furthermore, WG and SGR were predominantly dependent on FI and SS, respectively. Based on 4999 randomizations, the contribution rate of the treatment factors (including related FI) to WG and SGR was 64.9% and 79.7% , respectively.


Subject(s)
Fishes/physiology , Food Deprivation/physiology , Neural Networks, Computer , Weight Gain/physiology , Animals , Aquaculture/methods , Fishes/growth & development , Random Allocation , Starvation
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