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1.
Mol Cell Proteomics ; 22(8): 100609, 2023 08.
Article in English | MEDLINE | ID: mdl-37385347

ABSTRACT

Dampening functional levels of the mitochondrial deubiquitylating enzyme Ubiquitin-specific protease 30 (USP30) has been suggested as an effective therapeutic strategy against neurodegenerative disorders such as Parkinson's Disease. USP30 inhibition may counteract the deleterious effects of impaired turnover of damaged mitochondria, which is inherent to both familial and sporadic forms of the disease. Small-molecule inhibitors targeting USP30 are currently in development, but little is known about their precise nature of binding to the protein. We have integrated biochemical and structural approaches to gain novel mechanistic insights into USP30 inhibition by a small-molecule benzosulfonamide-containing compound, USP30inh. Activity-based protein profiling mass spectrometry confirmed target engagement, high selectivity, and potency of USP30inh for USP30 against 49 other deubiquitylating enzymes in a neuroblastoma cell line. In vitro characterization of USP30inh enzyme kinetics inferred slow and tight binding behavior, which is comparable with features of covalent modification of USP30. Finally, we blended hydrogen-deuterium exchange mass spectrometry and computational docking to elucidate the molecular architecture and geometry of USP30 complex formation with USP30inh, identifying structural rearrangements at the cleft of the USP30 thumb and palm subdomains. These studies suggest that USP30inh binds to this thumb-palm cleft, which guides the ubiquitin C terminus into the active site, thereby preventing ubiquitin binding and isopeptide bond cleavage, and confirming its importance in the inhibitory process. Our data will pave the way for the design and development of next-generation inhibitors targeting USP30 and associated deubiquitinylases.


Subject(s)
Deubiquitinating Enzymes , Mitophagy , Deubiquitinating Enzymes/antagonists & inhibitors , Deubiquitinating Enzymes/metabolism , Mitochondrial Proteins/metabolism , Mitophagy/physiology , Ubiquitin-Protein Ligases/metabolism , Ubiquitination , Sulfonamides/pharmacology
2.
Life Sci Alliance ; 3(8)2020 08.
Article in English | MEDLINE | ID: mdl-32636217

ABSTRACT

The mitochondrial deubiquitylase USP30 negatively regulates the selective autophagy of damaged mitochondria. We present the characterisation of an N-cyano pyrrolidine compound, FT3967385, with high selectivity for USP30. We demonstrate that ubiquitylation of TOM20, a component of the outer mitochondrial membrane import machinery, represents a robust biomarker for both USP30 loss and inhibition. A proteomics analysis, on a SHSY5Y neuroblastoma cell line model, directly compares the effects of genetic loss of USP30 with chemical inhibition. We have thereby identified a subset of ubiquitylation events consequent to mitochondrial depolarisation that are USP30 sensitive. Within responsive elements of the ubiquitylome, several components of the outer mitochondrial membrane transport (TOM) complex are prominent. Thus, our data support a model whereby USP30 can regulate the availability of ubiquitin at the specific site of mitochondrial PINK1 accumulation following membrane depolarisation. USP30 deubiquitylation of TOM complex components dampens the trigger for the Parkin-dependent amplification of mitochondrial ubiquitylation leading to mitophagy. Accordingly, PINK1 generation of phospho-Ser65 ubiquitin proceeds more rapidly in cells either lacking USP30 or subject to USP30 inhibition.


Subject(s)
Mitochondria/metabolism , Mitochondrial Proteins/metabolism , Thiolester Hydrolases/metabolism , HeLa Cells , Humans , Membrane Transport Proteins/metabolism , Mitochondria/physiology , Mitochondrial Membranes/physiology , Mitochondrial Precursor Protein Import Complex Proteins , Mitochondrial Proteins/genetics , Mitochondrial Proteins/physiology , Mitophagy/drug effects , Mitophagy/genetics , Neural Stem Cells/metabolism , Protein Kinases/genetics , Protein Kinases/metabolism , Receptors, Cell Surface/metabolism , Thiolester Hydrolases/physiology , Ubiquitin/metabolism , Ubiquitin-Protein Ligases/genetics , Ubiquitin-Protein Ligases/metabolism , Ubiquitination
3.
Cephalalgia ; 39(4): 533-543, 2019 04.
Article in English | MEDLINE | ID: mdl-30089403

ABSTRACT

BACKGROUND: Meningiomas are generally slowly growing intracranial tumors. They are often incidentally diagnosed, given that symptoms may be absent even in cases of an enormous tumor size. Headache is a frequent but not consistent symptom. Therefore, we examined the association between structural, biochemical and histochemical tumor parameters with preoperative as well as postoperative occurrence of headache. METHODS: In our study, we prospectively investigated 69 consecutive patients enrolled for meningioma neurosurgery. Anatomical, histological and biochemical parameters were acquired, and headache parameters were registered from the clinical report and from a questionnaire filled by the patients before neurosurgery. The headache was re-evaluated one year after neurosurgery. The study was designed to exploratively investigate whether there is an association of acquired clinical and biological parameters with the occurrence of preoperative and postoperative headache. RESULTS: Edema diameter and the proliferation marker MIB-1 were negatively associated with the incidence and intensity of preoperative headache, while the content of prostaglandin E2 in the tumor tissue was positively associated with preoperative headache intensity. Headache was more prevalent when the meningioma was located in the area supplied by the ophthalmic trigeminal branch. Compared to preoperative headache levels, an overall reduction was observed one year postoperative, and patients with a larger tumor had a higher headache remission. In parietal and occipital meningiomas and in those with a larger edema, the percentage of the headache remission rate was higher compared to other locations or smaller edema. Multivariable analyses showed an involvement of substance P and prostaglandin E2 in preoperative headache. CONCLUSIONS: The study demonstrates new associations between meningiomas and headache. The postoperative headache outcome in the presented patient sample is encouraging for the performed neurosurgical intervention. These results should be tested in a prospective study that incorporates all patients with meningiomas.


Subject(s)
Headache/diagnosis , Headache/surgery , Meningeal Neoplasms/surgery , Meningioma/surgery , Postoperative Care/trends , Preoperative Care/trends , Adult , Aged , Aged, 80 and over , Female , Follow-Up Studies , Headache/etiology , Humans , Male , Meningeal Neoplasms/complications , Meningioma/complications , Middle Aged , Neurosurgical Procedures/trends , Prospective Studies , Surveys and Questionnaires
4.
Diabetes ; 67(8): 1650-1662, 2018 08.
Article in English | MEDLINE | ID: mdl-29875100

ABSTRACT

The mechanisms responsible for painful and insensate diabetic neuropathy are not completely understood. Here, we have investigated sensory neuropathy in the Ins2+/Akita mouse, a hereditary model of diabetes. Akita mice become diabetic soon after weaning, and we show that this is accompanied by an impaired mechanical and thermal nociception and a significant loss of intraepidermal nerve fibers. Electrophysiological investigations of skin-nerve preparations identified a reduced rate of action potential discharge in Ins2+/Akita mechanonociceptors compared with wild-type littermates, whereas the function of low-threshold A-fibers was essentially intact. Studies of isolated sensory neurons demonstrated a markedly reduced heat responsiveness in Ins2+/Akita dorsal root ganglion (DRG) neurons, but a mostly unchanged function of cold-sensitive neurons. Restoration of normal glucose control by islet transplantation produced a rapid recovery of nociception, which occurred before normoglycemia had been achieved. Islet transplantation also restored Ins2+/Akita intraepidermal nerve fiber density to the same level as wild-type mice, indicating that restored insulin production can reverse both sensory and anatomical abnormalities of diabetic neuropathy in mice. The reduced rate of action potential discharge in nociceptive fibers and the impaired heat responsiveness of Ins2+/Akita DRG neurons suggest that ionic sensory transduction and transmission mechanisms are modified by diabetes.


Subject(s)
Diabetic Neuropathies/metabolism , Epidermis/innervation , Ganglia, Spinal/metabolism , Insulin/metabolism , Nerve Fibers, Unmyelinated/metabolism , Somatosensory Disorders/metabolism , Thermoreceptors/metabolism , Action Potentials , Amino Acid Substitution , Animals , Behavior, Animal , Cells, Cultured , Diabetes Mellitus/blood , Diabetes Mellitus/surgery , Diabetic Neuropathies/pathology , Diabetic Neuropathies/physiopathology , Diabetic Neuropathies/prevention & control , Epidermis/metabolism , Epidermis/pathology , Epidermis/physiopathology , Ganglia, Spinal/pathology , Ganglia, Spinal/physiopathology , Heterozygote , Insulin/genetics , Islets of Langerhans Transplantation , Kidney , Male , Mechanoreceptors/metabolism , Mechanoreceptors/pathology , Mice, Inbred C57BL , Mice, Mutant Strains , Nerve Fibers, Unmyelinated/pathology , Pain Measurement , Somatosensory Disorders/complications , Somatosensory Disorders/physiopathology , Somatosensory Disorders/prevention & control , Thermoreceptors/pathology , Thermoreceptors/physiopathology , Transplantation, Heterotopic
5.
Am J Physiol Regul Integr Comp Physiol ; 310(9): R806-18, 2016 05 01.
Article in English | MEDLINE | ID: mdl-26911463

ABSTRACT

Renal denervation (DNX) is a treatment for resistant arterial hypertension. Efferent sympathetic nerves regrow, but reinnervation by renal afferent nerves has only recently been shown in the renal pelvis of rats after unilateral DNX. We examined intrarenal perivascular afferent and sympathetic efferent nerves after unilateral surgical DNX. Tyrosine hydroxylase (TH), CGRP, and smooth muscle actin were identified in kidney sections from 12 Sprague-Dawley rats, to distinguish afferents, efferents, and vasculature. DNX kidneys and nondenervated kidneys were examined 1, 4, and 12 wk after DNX. Tissue levels of CGRP and norepinephrine (NE) were measured with ELISA and mass spectrometry, respectively. DNX decreased TH and CGRP labeling by 90% and 95%, respectively (P < 0.05) within 1 wk. After 12 wk TH and CGRP labeling returned to baseline with a shift toward afferent innervation (P < 0.05). Nondenervated kidneys showed a doubling of both labels within 12 wk (P < 0.05). CGRP content decreased by 72% [3.2 ± 0.3 vs. 0.9 ± 0.2 ng/gkidney; P < 0.05] and NA by 78% [1.1 ± 0.1 vs. 0.2 ± 0.1 pmol/mgkidney; P < 0.05] 1 wk after DNX. After 12 wk, CGRP, but not NE, content in DNX kidneys was fully recovered, with no changes in the nondenervated kidneys. The use of phenol in the DNX procedure did not influence this result. We found morphological reinnervation and transmitter recovery of afferents within 12 wk after DNX. Despite morphological evidence of sympathetic regrowth, NE content did not fully recover. These results suggest a long-term net surplus of afferent influence on the DNX kidney may be contributing to the blood pressure lowering effect of DNX.


Subject(s)
Kidney/innervation , Nerve Regeneration/physiology , Sympathectomy , Actins/genetics , Actins/metabolism , Animals , Calcitonin Gene-Related Peptide/genetics , Calcitonin Gene-Related Peptide/metabolism , Gene Expression Regulation , Male , Neurons, Afferent/physiology , Neurons, Efferent/physiology , Rats , Rats, Sprague-Dawley , Tyrosine 3-Monooxygenase/genetics , Tyrosine 3-Monooxygenase/metabolism
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