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1.
Int J Syst Evol Microbiol ; 65(Pt 1): 23-29, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25267869

ABSTRACT

Six isolates recovered from coffee seeds giving off a potato-like flavour were studied. Gene sequencing (rrs and rpoB) showed they belong to the genus Pantoea. By DNA-DNA hybridization, the isolates constituted a genomic species with less than 17% relatedness to 96 strains representing enterobacterial species. Multilocus sequence analysis (gyrB, rpoB, atpD and infB genes) showed the isolates to represent a discrete species of the genus Pantoea. Nutritional versatility of the novel species was poor. The novel species is proposed as Pantoea coffeiphila sp.nov. and its type strain is Ca04(T) ( =CIP 110718(T) =DSM 28482(T)).


Subject(s)
Coffee/microbiology , Food Microbiology , Pantoea/classification , Phylogeny , Taste , Bacterial Typing Techniques , Burundi , DNA, Bacterial/genetics , Food Contamination , Genes, Bacterial , Molecular Sequence Data , Multilocus Sequence Typing , Nucleic Acid Hybridization , Pantoea/genetics , Pantoea/isolation & purification , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA
2.
Int J Food Microbiol ; 121(2): 234-41, 2008 Jan 31.
Article in English | MEDLINE | ID: mdl-18068845

ABSTRACT

Ochratoxin A (OTA) is the main mycotoxin occurring in cocoa. A study was conducted in Cameroon to assess how filamentous fungi and toxigenesis were affected by the type of cocoa post-harvest treatment (boxes or heaps). The filamentous fungi isolated were almost identical when fermentation was carried out in boxes or heaps, with the presence of abundant black Aspergillus filamentous fungi: A. niger and A. carbonarius. Filamentous fungi were more abundant at the end of the harvesting season. Factors affecting bean integrity (poor handling, deferred processing) resulted in a qualitative and quantitative increase in contamination, when the total number of filamentous fungi could reach a maximum value of 5.5+/-1.4x10(7) CFU g(-1) and black Aspergilli a maximum value of 1.42+/-2.2x10(7) CFU g(-1). A toxigenesis study showed that Aspergillus carbonarius was the main OTA-producing strain isolated. Its maximum production could reach 2.77 microg g(-1) on rice medium. Aspergillus niger strains did not always produce OTA and their toxigenesis was much lower. Fermented dried cocoa from poor quality pods was the most contaminated by OTA: up to 48 ng g(-1).


Subject(s)
Aspergillus/metabolism , Cacao/microbiology , Food Contamination/analysis , Food Handling/methods , Ochratoxins/biosynthesis , Aspergillus/growth & development , Cameroon , Carcinogens/analysis , Carcinogens/isolation & purification , Colony Count, Microbial , Consumer Product Safety , Fermentation , Ochratoxins/isolation & purification , Seasons
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