Simulating Root Growth as a Function of Soil Strength and Yield With a Field-Scale Crop Model Coupled With a 3D Architectural Root Model.

Accurate prediction of root growth and related resource uptake is crucial to accurately simulate crop growth especially under unfavorable environmental conditions. We coupled a 1D field-scale crop-soil model running in the SIMPLACE modeling framework with the 3D architectural root model CRootbox on a daily time step and implemented a stress function to simulate root elongation as a function of soil bulk density and matric potential. The model was tested with field data collected during two growing seasons of spring barley and winter wheat on Haplic Luvisol. In that experiment, mechanical strip-wise subsoil loosening (30-60 cm) (DL treatment) was tested, and effects on root and shoot growth at the melioration strip as well as in a control treatment were evaluated. At most soil depths, strip-wise deep loosening significantly enhanced observed root length densities (RLDs) of both crops as compared to the control. However, the enhanced root growth had a beneficial effect on crop productivity only in the very dry season in 2018 for spring barley where the observed grain yield at the strip was 18% higher as compared to the control. To understand the underlying processes that led to these yield effects, we simulated spring barley and winter wheat root and shoot growth using the described field data and the model. For comparison, we simulated the scenarios with the simpler 1D conceptual root model. The coupled model showed the ability to simulate the main effects of strip-wise subsoil loosening on root and shoot growth. It was able to simulate the adaptive plasticity of roots to local soil conditions (more and thinner roots in case of dry and loose soil). Additional scenario runs with varying weather conditions were simulated to evaluate the impact of deep loosening on yield under different conditions. The scenarios revealed that higher spring barley yields in DL than in the control occurred in about 50% of the growing seasons. This effect was more pronounced for spring barley than for winter wheat. Different virtual root phenotypes were tested to assess the potential of the coupled model to simulate the effect of varying root traits under different conditions.

Five-year soil warming changes soil C and N dynamics in a single rice paddy field in Japan.

Soil temperature is an important determinant of carbon (C) and nitrogen (N) cycling in terrestrial ecosystems, but its effects on soil organic carbon (SOC) and total nitrogen (TN) dynamics as well as rice biomass in rice paddy ecosystems are not fully understood. We conducted a five-year soil warming experiment in a single-cropping paddy field in Japan. Soil temperatures were elevated by approximate 2 °C with heating wires during the rice growing season and by approximate 1 °C with nighttime thermal blankets during the fallow season. Soil samples were collected in autumn after rice harvest and in spring after fallow each year, and anaerobically incubated at 30 °C for four weeks to determine soil C decomposition and N mineralization potentials. The SOC and TN contents, rice biomass, dissolved organic carbon (DOC) and microbial biomass carbon (MBC) concentrations were measured in the study. Soil warming did not significantly enhance rice aboveground and root biomasses, but it significantly decreased SOC and TN contents and thus decreased soil C decomposition and N mineralization potentials due to depletion of available C and N. Moreover, soil warming significantly decreased DOC concentration but significantly increased MBC concentration. The ratios of C decomposition potential to N mineralization potential, decomposition potential to SOC, and N mineralization to TN were not affected by soil warming. There were significant seasonal and annual variations in SOC, C decomposition and N mineralization potentials, soil DOC and MBC under each temperature treatments. Our study implied that soil warming can decrease soil C and N stocks in paddy ecosystem probably via stimulating microbial activities and accelerating the depletion of DOC. This study further highlights the importance of long-term in situ observation of C and N dynamics and their availabilities in rice paddy ecosystems under increasing global warming scenarios.

High Microbial Diversity Promotes Soil Ecosystem Functioning.

In soil, the link between microbial diversity and carbon transformations is challenged by the concept of functional redundancy. Here, we hypothesized that functional redundancy may decrease with increasing carbon source recalcitrance and that coupling of diversity with C cycling may change accordingly. We manipulated microbial diversity to examine how diversity decrease affects the decomposition of easily degradable (i.e., allochthonous plant residues) versus recalcitrant (i.e., autochthonous organic matter) C sources. We found that a decrease in microbial diversity (i) affected the decomposition of both autochthonous and allochthonous carbon sources, thereby reducing global CO2 emission by up to 40%, and (ii) shaped the source of CO2 emission toward preferential decomposition of most degradable C sources. Our results also revealed that the significance of the diversity effect increases with nutrient availability. Altogether, these findings show that C cycling in soil may be more vulnerable to microbial diversity changes than expected from previous studies, particularly in ecosystems exposed to nutrient inputs. Thus, concern about the preservation of microbial diversity may be highly relevant in the current global-change context assumed to impact soil biodiversity and the pulse inputs of plant residues and rhizodeposits into the soil.IMPORTANCE With hundreds of thousands of taxa per gram of soil, microbial diversity dominates soil biodiversity. While numerous studies have established that microbial communities respond rapidly to environmental changes, the relationship between microbial diversity and soil functioning remains controversial. Using a well-controlled laboratory approach, we provide empirical evidence that microbial diversity may be of high significance for organic matter decomposition, a major process on which rely many of the ecosystem services provided by the soil ecosystem. These new findings should be taken into account in future studies aimed at understanding and predicting the functional consequences of changes in microbial diversity on soil ecosystem services and carbon storage in soil.

Dynamics of copper and zinc sedimentation in a lagooning system receiving landfill leachate.

This study characterises the sediment dredged from a lagooning system composed of a settling pond and three lagoons that receive leachates from a municipal solid waste (MSW) landfill in France. Organic carbon, carbonate, iron oxyhydroxides, copper (Cu) and zinc (Zn) concentrations were measured in the sediment collected from upstream to downstream in the lagooning system. In order to complete our investigation of sedimentation mechanisms, leachates were sampled in both dry (spring) and wet (winter) seasonal conditions. Precipitation of calcite and amorphous Fe-oxyhydroxides and sedimentation of organic matter occurred in the settling pond. Since different distributions of Zn and Cu concentrations are measured in sediment samples collected downstream in the lagooning system, it is suggested that these elements were not distributed in a similar way in the leachate fractions during the first stage of treatment in the settling pond, so that their sedimentation dynamics in the lagooning system differ. In the lagoons, it was found that organic carbon plays a major role in Cu and Zn mobility and trapping. The presence of macrophytes along the edges provided an input of organic matter that enhanced Cu and Zn scavenging. This edge effect resulted in a two-fold increase in Cu and Zn concentrations in the sediment deposited near the banks of the lagoons, thus confirming the importance of vegetation for the retention of Cu and Zn in lagooning systems.