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1.
Cold Spring Harb Protoc ; 2023(4): pdb.prot098269, 2023 04 03.
Article in English | MEDLINE | ID: mdl-36180216

ABSTRACT

Phenotypic drug discovery assesses the effect of small molecules on the phenotype of cells, tissues, or whole organisms without a priori knowledge of the target or pathway. Using vertebrate embryos instead of cell-based assays has the advantage that the screening of small molecules occurs in the context of the complex biology and physiology of the whole organism. Fish and amphibians are the only classes of vertebrates with free-living larvae amenable to high-throughput drug screening in multiwell dishes. For both animal classes, particularly zebrafish and Xenopus, husbandry requirements are straightforward, embryos can be obtained in large numbers, and they develop ex utero so their development can be monitored easily with a dissecting microscope. At 350 million years, the evolutionary distance between amphibians and humans is significantly shorter than that between fish and humans, which is estimated at 450 million years. This increases the likelihood that drugs discovered by screening in amphibian embryos will be active in humans. Here, we describe the basic protocol for the medium- to high-throughput screening of chemical libraries using embryos of the African clawed frog Xenopus laevis Bioactive compounds are identified by observing phenotypic changes in whole embryos and tadpoles. In addition to the discovery of compounds with novel bioactivities, the phenotypic screening protocol also allows for the identification of compounds with in vivo toxicity, eliminating early hits that are poor drug candidates. We also highlight important considerations for designing chemical screens, choosing chemical libraries, and performing secondary screens using whole mount in situ hybridization or immunostaining.


Subject(s)
Small Molecule Libraries , Zebrafish , Animals , Humans , Small Molecule Libraries/pharmacology , Xenopus laevis , Larva , Zebrafish/genetics , Drug Discovery/methods , Phenotype
2.
PLoS One ; 9(6): e99615, 2014.
Article in English | MEDLINE | ID: mdl-24933027

ABSTRACT

Determination of blood flow velocity and related hemodynamic parameters is an important aspect of physiological studies which in many settings requires fluorescent labeling. Here we show that Third Harmonic Generation (THG) microscopy is a suitable tool for label-free intravital investigations of the microcirculation in widely-used physiological model systems. THG microscopy is a non-fluorescent multi-photon scanning technique combining the advantages of label-free imaging with restriction of signal generation to a focal spot. Blood flow was visualized and its velocity was measured in adult mouse cremaster muscle vessels, non-invasively in mouse ear vessels and in Xenopus tadpoles. In arterioles, THG line scanning allowed determination of the flow pulse velocity curve and hence the heart rate. By relocating the scan line we obtained velocity profiles through vessel diameters, allowing shear rate calculations. The cell free layer containing the glycocalyx was also visualized. Comparison of the current microscopic resolution with theoretical, diffraction limited resolution let us conclude that an about sixty-fold THG signal intensity increase may be possible with future improved optics, optimized for 1200-1300 nm excitation. THG microscopy is compatible with simultaneous two-photon excited fluorescence detection. It thus also provides the opportunity to determine important hemodynamic parameters in parallel to common fluorescent observations without additional label.


Subject(s)
Blood Flow Velocity , Microcirculation , Microscopy, Confocal/methods , Animals , Dextrans , Ear, External/blood supply , Erythrocytes/ultrastructure , Fluorescein-5-isothiocyanate/analogs & derivatives , Fluorescent Dyes , Glycocalyx/ultrastructure , Heart Rate , Hemoglobins/chemistry , Larva , Male , Mice , Mice, Inbred BALB C , Mice, Inbred C57BL , Mice, Nude , Microscopy, Confocal/instrumentation , Microscopy, Fluorescence/methods , Microspheres , Muscle, Skeletal/blood supply , Xenopus laevis/growth & development
3.
Adv Drug Deliv Rev ; 69-70: 225-46, 2014 Apr.
Article in English | MEDLINE | ID: mdl-24576445

ABSTRACT

Many rare human inherited diseases remain untreatable despite the fact that the disease causing genes are known and adequate mouse disease models have been developed. In vivo phenotypic drug screening relies on isolating drug candidates by their ability to produce a desired therapeutic phenotype in whole organisms. Embryos of zebrafish and Xenopus frogs are abundant, small and free-living. They can be easily arrayed in multi-well dishes and treated with small organic molecules. With the development of novel genome modification tools, such a zinc-finger nucleases (ZFNs), transcription activator-like effector nucleases (TALENs), and CRISPR/Cas, it is now possible to efficiently engineer non-mammalian models of inherited human diseases. Here, we will review the rapid progress made in adapting these novel genome editing tools to Xenopus. The advantages of Xenopus embryos as in vivo models to study human inherited diseases will be presented and their utility for drug discovery screening will be discussed. Being a tetrapod, Xenopus complements zebrafish as an indispensable non-mammalian animal model for the study of human disease pathologies and the discovery of novel therapeutics for inherited diseases.


Subject(s)
Drug Discovery/methods , Genetic Engineering/methods , Phenotype , Xenopus/embryology , Animals , Drug Discovery/trends , Drug Evaluation, Preclinical/methods , Drug Evaluation, Preclinical/trends , Genetic Engineering/trends , Humans , Life Cycle Stages/physiology
4.
PLoS One ; 7(3): e33522, 2012.
Article in English | MEDLINE | ID: mdl-22438943

ABSTRACT

The transcription factor HNF1B, encoded by the TCF2 gene, plays an important role in the organogenesis of vertebrates. In humans, heterozygous mutations of HNF1B are associated with several diseases, such as pancreatic ß-cell dysfunction leading to maturity-onset diabetes of the young (MODY5), defective kidney development, disturbed liver function, pancreas atrophy, and malformations of the genital tract. The African claw frog Xenopus laevis is an excellent model to study the processes involved in embryogenesis and organogenesis, as it can be manipulated easily with a series of methods. In the present study, we overexpressed HNF1ß mutants in the developing Xenopus embryo to assess their roles during organogenesis, particularly in the developing pronephric kidney. Towards this goal, we developed a heat-shock inducible binary Cre/loxP system with activator and effector strains. Heat-shock activation of the mutant HNF1B variants P328L329del and A263insGG resulted in malformations of various organs and the affected larvae developed large edemas. Defects in the pronephros were primarily confined to malformed proximal tubules. Furthermore, the expression of the proximal tubule marker genes tmem27 and slc3a1, both involved in amino acid transport, was affected. Both P328L329del and A263insGG downregulated expression of slc3a1. In addition, P328L329del reduced tmem27 expression while A263insGG overexpression decreased expression of the chloride channel clcnk and the transcription factor pax2. Overexpression of two mutant HNF1B derivatives resulted in distinct phenotypes reflected by either a reduction or an enlargement of pronephros size. The expression of selected pronephric marker genes was differentially affected upon overexpression of HNF1B mutations. Based on our findings, we postulate that HNF1B mutations influence gene regulation upon overexpression in specific and distinct manners. Furthermore, our study demonstrates that the newly established Cre/loxP system for Xenopus embryos is an attractive alternative to examine the gene regulatory potential of transcription factors in developing pronephric kidney as exemplified here for HNF1B.


Subject(s)
Hepatocyte Nuclear Factor 1-beta/genetics , Pronephros/embryology , Pronephros/metabolism , Xenopus Proteins/genetics , Xenopus laevis/embryology , Xenopus laevis/genetics , Amino Acid Transport Systems, Neutral/genetics , Animals , Base Sequence , Chloride Channels/genetics , DNA Primers/genetics , Female , Gene Expression Regulation, Developmental , Genetic Markers , Heat-Shock Response/genetics , Larva/growth & development , Larva/metabolism , Male , Membrane Proteins/genetics , Mutagenesis, Insertional , Mutation , PAX2 Transcription Factor/genetics , Sequence Deletion , Xenopus laevis/growth & development
5.
Dev Cell ; 19(1): 39-53, 2010 Jul 20.
Article in English | MEDLINE | ID: mdl-20643349

ABSTRACT

Directional collective migration is now a widely recognized mode of migration during embryogenesis and cancer. However, how a cluster of cells responds to chemoattractants is not fully understood. Neural crest cells are among the most motile cells in the embryo, and their behavior has been likened to malignant invasion. Here, we show that neural crest cells are collectively attracted toward the chemokine Sdf1. While not involved in initially polarizing cells, Sdf1 directionally stabilizes cell protrusions promoted by cell contact. At this cell contact, N-cadherin inhibits protrusion and Rac1 activity and in turn promotes protrusions and activation of Rac1 at the free edge. These results show a role for N-cadherin during contact inhibition of locomotion, and they reveal a mechanism of chemoattraction likely to function during both embryogenesis and cancer metastasis, whereby attractants such as Sdf1 amplify and stabilize contact-dependent cell polarity, resulting in directional collective migration.


Subject(s)
Cell Adhesion/physiology , Cell Polarity/physiology , Chemotaxis/physiology , Animals , Animals, Genetically Modified , Cadherins/genetics , Cadherins/physiology , Cell Communication/physiology , Cells, Cultured , Chemokine CXCL12/genetics , Chemokine CXCL12/physiology , Contact Inhibition/physiology , Embryonic Development/physiology , Models, Biological , Neural Crest/cytology , Neural Crest/embryology , Receptors, CXCR4/genetics , Receptors, CXCR4/physiology , Xenopus/embryology , Xenopus/genetics , Xenopus/physiology , Xenopus Proteins/genetics , Xenopus Proteins/physiology
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