Advanced online monitoring of cell culture off-gas using proton transfer reaction mass spectrometry.

Mass spectrometry has been frequently applied to monitor the O2 and CO2 content in the off-gas of animal cell culture fermentations. In contrast to classical mass spectrometry the proton transfer reaction mass spectrometry (PTR-MS) provides additional information of volatile organic compounds by application of a soft ionization technology. Hence, the spectra show less fragments and can more accurately assigned to particular compounds. In order to discriminate between compounds of non-metabolic and metabolic origin cell free experiments and fed-batch cultivations with a recombinant CHO cell line were conducted. As a result, in total eight volatiles showing high relevance to individual cultivation or cultivation conditions could be identified. Among the detected compounds methanethiol, with a mass-to-charge ratio of 49, qualifies as a key candidate in process monitoring due to its strong connectivity to lactate formation. Moreover, the versatile and complex data sets acquired by PTR MS provide a valuable resource for statistical modeling to predict non direct measurable parameters. Hence, partial least square regression was applied to the complete spectra of volatiles measured and important cell culture parameters such as viable cell density estimated (R² = 0.86). As a whole, the results of this study clearly show that PTR-MS provides a powerful tool to improve bioprocess-monitoring for mammalian cell culture. Thus, specific volatiles emitted by cells and measured online by the PTR-MS and complex variables gained through statistical modeling will contribute to a deeper process understanding in the future and open promising perspectives to bioprocess control.

First observation of a potential non-invasive breath gas biomarker for kidney function.

We report on the search for low molecular weight molecules-possibly accumulated in the bloodstream and body-in the exhaled breath of uremic patients with kidney malfunction. We performed non-invasive analysis of the breath gas of 96 patients shortly before and several times after kidney transplantation using proton-transfer-reaction mass spectrometry (PTR-MS), a very sensitive technique for detecting trace amounts of volatile organic compounds. A total of 642 individual breath analyses which included at least 41 different chemical components were carried out. Correlation analysis revealed one particular breath component with a molecular mass of 114 u (unified atomic mass units) that clearly correlated with blood serum creatinine, which is the currently accepted marker for assessing the function of the kidney. In particular, daily urine production showed good correlation with the identified breath marker. An independent set of seven samples taken from three patients at the onset of dialysis and three controls with normal kidney function confirmed a significant difference in concentration between patients and controls for a compound with a molecular mass of 114.1035 u using high mass resolving proton-transfer-reaction time-of-flight mass spectrometry (PTR-TOF-MS). A chemical composition of C7H14O was derived for the respective component. Fragmentation experiments on the same samples using proton-transfer-reaction triple-quadrupole tandem mass spectrometry (PTR-QqQ-MS) suggested that this breath marker is a C7-ketone or a branched C7-aldehyde. Non-invasive real-time monitoring of the kidney function via this breath marker could be a possible future procedure in the clinical setting.

Implementation of proton transfer reaction-mass spectrometry (PTR-MS) for advanced bioprocess monitoring.

We report on the implementation of proton transfer reaction-mass spectrometry (PTR-MS) technology for on-line monitoring of volatile organic compounds (VOCs) in the off-gas of bioreactors. The main part of the work was focused on the development of an interface between the bioreactor and an analyzer suitable for continuous sampling of VOCs emanating from the bioprocess. The permanently heated sampling line with an inert surface avoids condensation and interaction of volatiles during transfer to the PTR-MS. The interface is equipped with a sterile sinter filter unit directly connected to the bioreactor headspace, a condensate trap, and a series of valves allowing for dilution of the headspace gas, in-process calibration, and multiport operation. To assess the aptitude of the entire system, a case study was conducted comprising three identical cultivations with a recombinant E. coli strain, and the volatiles produced in the course of the experiments were monitored with the PTR-MS. The high reproducibility of the measurements proved that the established sampling interface allows for reproducible transfer of volatiles from the headspace to the PTR-MS analyzer. The set of volatile compounds monitored comprises metabolites of different pathways with diverse functions in cell physiology but also volatiles from the process matrix. The trends of individual compounds showed diverse patterns. The recorded signal levels covered a dynamic range of more than five orders of magnitude. It was possible to assign specific volatile compounds to distinctive events in the bioprocess. The presented results clearly show that PTR-MS was successfully implemented as a powerful bioprocess-monitoring tool and that access to volatiles emitted by the cells opens promising perspectives in terms of advanced process control.

Oxidative quenching within photosensitizer-acceptor dyads based on bis(bidentate) phosphine-connected osmium(II) bipyridyl light absorbers and reactive metal sites.

For the first time oxidative quenching of OsP2N4 chromophores by reactive PtII or PdII sites containing cis, trans, cis-1,2,3,4-tetrakis(diphenylphosphino)cyclobutane (dppcb) is directly observed despite the presence of a saturated cyclobutane backbone "bridge". This dramatic effect is measured as a sudden temperature-dependent onset of a reduction in phosphorescence lifetime in [Os(bpy)2(dppcb)MCl2](SbF6)2 (M = Pt, 1; Pd, 2). The appearance of this additional energy release is not detectable in [Os(bpy)2(dppcbO2)](PF6)2 (3), where dppcbO2 is cis, trans, cis-1,2-bis(diphenylphosphinoyl)-3,4-bis(diphenylphosphino)cyclobutane. Obviously, the square-planar metal centers in 1 and 2 are responsible for this effect. In line with these observations, the emission quantum yields at room temperature for 1 and 2 are drastically reduced compared with 3. Since this luminescence quenching implies strong intramolecular interaction between the OsII excited states and the acceptor sites and depends on the metal⋯metal distances, also the single crystal X-ray structures of 1-3 are given.

Surprising photochemical reactivity and visible light-driven energy transfer in heterodimetallic complexes.

The bis(bidentate) phosphine cis,trans,cis-1,2,3,4-tetrakis(diphenylphosphino)cyclobutane (dppcb) has been used for the synthesis of a series of novel heterodimetallic complexes starting from [Ru(bpy)(2)(dppcb)]X(2) (1; X = PF(6), SbF(6)), so-called dyads, showing surprising photochemical reactivity. They consist of [Ru(bpy)(2)](2+)"antenna" sites absorbing light combined with reactive square-planar metal centres. Thus, irradiating [Ru(bpy)(2)(dppcb)MCl(2)]X(2) (M = Pt, 2; Pd, 3; X = PF(6), SbF(6)) dissolved in CH(3)CN with visible light, produces the unique heterodimetallic compounds [Ru(bpy)(CH(3)CN)(2)(dppcb)MCl(2)]X(2) (M = Pt, 7; Pd, 8; X = PF(6), SbF(6)). In an analogous reaction the separable diastereoisomers (ΔΛ/ΛΔ)- and (ΔΔ/ΛΛ)-[Ru(bpy)(2)(dppcb)Os(bpy)(2)](PF(6))(4) (5/6) lead to [Ru(bpy)(CH(3)CN)(2)(dppcb)Os(bpy)(2)](PF(6))(4) (9), where only the RuP(2)N(4) moiety of 5/6 is photochemically reactive. By contrast, in the case of [Ru(bpy)(2)(dppcb)NiCl(2)]X(2) (4; X = PF(6), SbF(6)) no clean photoreaction is observed. Interestingly, this difference in photochemical behaviour is completely in line with the related photophysical parameters, where 2, 3, and 5/6, but not 4, show long-lived excited states at ambient temperature necessary for this type of photoreaction. Furthermore, the photochemical as well as the photophysical properties of 2-4 are also in accordance with their single crystal X-ray structures presented in this work. It seems likely that differences in "steric pressure" play a major role for these properties. The unique complexes 7-9 are also fully characterized by single-crystal X-ray structure analyses, clearly showing that the stretching vibration modes of the ligand CH(3)CN, present only in 7-9, cannot be directly influenced by "steric pressure". This has dramatic consequences for their photophysical parameters. The trans-[Ru(bpy)(CH(3)CN)(2)](2+) chromophore of 9 acts as efficient "antenna" for visible light-driven energy transfer to the Os-centred "trap" site, resulting in k(en) ≥ 2 × 10(9) s(-1) for the energy transfer. Since electron transfer is made possible by the use of this intervening energy transfer, in dyads like 2-4 highly reactive M(0) species (M = Pt, Pd, Ni) could be generated. These species are not stable in water and M(II) hydride intermediates are usually formed, further reacting with H(+) to give H(2). Thus, derivatives of 3, namely [M(bpy)(2)(dppcb)Pd(bpy)](PF(6))(4) (M = Os, Ru) dissolved in 1:1 (v/v) H(2)O-CH(3)CN produce H(2) during photolysis with visible light.

Regio- and chemoselective oxidation of the bis(bidentate) phosphine cis,trans,cis-1,2,3,4-tetrakis(diphenylphosphino)cyclobutane via cobalt(II) mediated dioxygen activation.

The bis(bidentate) phosphine cis,trans,cis-1,2,3,4-tetrakis(diphenylphosphino)cyclobutane (dppcb) has been regioselectively oxidized leading to novel, hemilabile ligands. [Co2Cl4(dppcb)] (1a) is transformed via cobalt(II) mediated dioxygen activation into [Co2Cl4(2,3-trans-dppcbO2)] (2a) in excellent yield, where 2,3-trans-dppcbO2 is cis,trans,cis-2,3-bis(diphenylphosphinoyl)-1,4-bis(diphenylphosphino)-cyclobutane. By contrast, the in situ presence of dioxygen during the synthesis of Co2Br4(dppcb)] (1b) produces both [Co2Br4(2,3-trans-dppcbO2)] (2b) and [Co2Br4(1,3-trans-dppcbO2)] (3), where 1,3-trans-dppcbO2 is cis,trans,cis-1,3-bis(diphenylphosphinoyl)-2,4-bis(diphenylphosphino)-cyclobutane. The new compounds 2a, 2b and 3 have been obtained as pure, crystalline solids and all three X-ray structure analyses have been performed showing folded cyclobutane rings. Interestingly, the corresponding reaction using [Co2I4(dppcb)] (1c) proceeds chemoselectively. Thus, [Co2I4(dppcbO3)] (4), where dppcbO3 is cis,trans,cis-1,2,3-tris(diphenylphosphinoyl)-4-diphenylphosphinocyclobutane, is formed in excellent yield and also fully characterized by an X-ray structure analysis showing two different conformations of 4. However, [Co2(NO3)4(dppcb)] (1d) shows no dioxygen activation at all. Therefore, in order to reveal the mechanism of this oxidation [Co2I4(DMF)2(dppcb)] (5) has been prepared and its X-ray structure is presented. The synthesis of [Co2I4(PMe2Ph)2(dppcb)] (6) proves that this is a common reaction pathway. Furthermore, because the product distribution of the oxidation strongly depends on the kind of halides present, the whole series Co2X4(dppcbO4)] (X = Cl, 7a; Br, 7b; I, 7c) has been prepared, where dppcbO4 is cis,trans,cis-1,2,3,4-tetrakis(diphenylphosphinoyl)-cyclobutane, and all three X-ray structures are given, also showing folded cyclobutane rings. It seems likely that coordination of dppcb to cobalt(II) is essential to form the regio- and chemoselectively oxygenated molecules.

On the use of Tedlar® bags for breath-gas sampling and analysis.

The storage capability of Tedlar® bags for gaseous compounds was assessed using on-line proton-transfer-reaction mass spectrometry (PTR-MS). Sample bags were filled with a mixture of volatile organic compounds (VOCs) at known quantities in the ppbv range. The test gas included alcohol, nitrile, aldehyde, ketone, terpene and aromatic compounds. PTR-MS enabled frequent bag-direct measurements of compound abundances over a 70 h storage period. Concentrations of all compounds decreased with bag storage time, with compound-specific decay rates. The most rapid decline in concentration levels was seen for water vapour in the bag, i.e. sample humidity. Such a decrease is particularly relevant for breath-gas samples, where water vapour content is high. Compound losses were attributed to a combination of adsorption to and diffusion through the bag walls. Storage property observations suggest that sample analyses made within 10 h of sampling offer adequate sample authenticity replication. Based on observations, an appropriate bag-cleaning procedure was established and assessed. Results indicated that acceptable bag cleanliness for breath-gas sampling is achievable.

3,6-Dihydroxy-2-(11-phenylundecanoyl)cyclohex-2-en-1-one from Virola venosa bark.

The structure of the title compound, C23H32O4, an arylalkanone isolated from the petroleum ether fraction of the ethanol extract of the bark of Virola venosa, has been established by NMR spectroscopy and, for the first time, by X-ray structure analysis. Two independent molecules of the same enantiomer are present in the unit cell. Both molecules exhibit an intramolecular hydrogen bond, which can be correlated with a rare signal observed at 18.28 p.p.m. in the 1H NMR spectrum. The packing, in space group P1, is determined by a pseudo-center of symmetry leading to a short intermolecular contact, which is present in one molecule but does not occur in the other. As a consequence, the O-C-C-O torsion angles [-16.9 (3) and -12.7 (3) degrees ] through the ketone and its adjacent hydroxy group are significantly different in the two molecules.