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1.
Ned Tijdschr Geneeskd ; 1672023 03 16.
Article in Dutch | MEDLINE | ID: mdl-36928680

ABSTRACT

Hypoxia can be an early sign of infection, respiratory or circulatory pathology in infants. Since it is difficult to properly judge oxygen saturation solely by skin discoloration, it is preferable to objectify this parameter via pulse oximetry (PO). PO in young infants has shown to be feasible in the primary care setting. Even though PO is broadly used by general practitioners (GPs) in older children and adults, it is rarely performed in young infants. We present three patients, aged 0 to 6 months, who were seen in primary care, where PO was an important factor in determining the level of illness. These patients illustrate the value of PO in infants by GPs in estimating illness severity, need for referral and mode of transport to the emergency department. We therefore advocate for GPs to obtain adequate equipment for PO in infants.


Subject(s)
Hypoxia , Oxygen Saturation , Humans , Infant , Hypoxia/diagnosis , Oximetry , Oxygen , Primary Health Care , Infant, Newborn
2.
J Clin Endocrinol Metab ; 100(4): 1609-18, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25668198

ABSTRACT

CONTEXT: Longitudinal data on bone mineral density (BMD) in children and adolescents with Prader-Willi Syndrome (PWS) during long-term GH treatment are not available. OBJECTIVE: This study aimed to determine effects of long-term GH treatment and puberty on BMD of total body (BMDTB), lumbar spine (BMDLS), and bone mineral apparent density of the lumbar spine (BMADLS) in children with PWS. DESIGN AND SETTING: This was a prospective longitudinal study of a Dutch PWS cohort. PARTICIPANTS: Seventy-seven children with PWS who remained prepubertal during GH treatment for 4 years and 64 children with PWS who received GH treatment for 9 years participated in the study. INTERVENTION: The children received GH treatment, 1 mg/m(2)/day (≅ 0.035 mg/kg/d). MAIN OUTCOME MEASURES: BMDTB, BMDLS, and BMADLS was measured by using the same dual-energy x-ray absorptiometry machine for all annual measurements. RESULTS: In the prepubertal group, BMDTB standard deviation score (SDS) and BMDLSSDS significantly increased during 4 years of GH treatment whereas BMADLSSDS remained stable. During adolescence, BMDTBSDS and BMADLSSDS decreased significantly, in girls from the age of 11 years and in boys from the ages of 14 and 16 years, respectively, but all BMD parameters remained within the normal range. Higher Tanner stages tended to be associated with lower BMDTBSDS (P = .083) and a significantly lower BMADLSSDS (P = .016). After 9 years of GH treatment, lean body mass SDS was the most powerful predictor of BMDTBSDS and BMDLSSDS in adolescents with PWS. CONCLUSIONS: This long-term GH study demonstrates that BMDTB, BMDLS, and BMADLS remain stable in prepubertal children with PWS but decreases during adolescence, parallel to incomplete pubertal development. Based on our findings, clinicians should start sex hormone therapy from the age of 11 years in girls and 14 years in boys unless there is a normal progression of puberty.


Subject(s)
Bone Density , Human Growth Hormone/therapeutic use , Prader-Willi Syndrome/drug therapy , Puberty , Adolescent , Body Composition/drug effects , Bone Density/drug effects , Child , Child, Preschool , Female , Gonadal Steroid Hormones/therapeutic use , Humans , Longitudinal Studies , Male , Netherlands , Prader-Willi Syndrome/physiopathology , Puberty/drug effects , Puberty/physiology , Time Factors
3.
Horm Res Paediatr ; 81(6): 416-21, 2014.
Article in English | MEDLINE | ID: mdl-24714330

ABSTRACT

BACKGROUND: Most isodicentric (Xp) and (Xq) chromosomes occur as a mosaic with a 45,X cell line. Patients with a nonmosaic 46,X,idic(Xq) are rare. CASES: The first girl was referred at 13 years with a short stature and pubertal delay (M1, P2, A1). Her height was 141.6 cm (-3.1 SDS). Ovarian failure was present. The second girl was referred because of her short stature at 12.5 years. Her height was 142.2 cm (-2.4 SDS). She had spontaneous puberty (M3, P1, A1). RESULTS: In both girls, conventional karyotyping of lymphocytes revealed an aberrant X chromosome consisting of twice the short arm and a small part of the long arm of the X chromosome [nonmosaic 46,X,psu idic(X)(q21.1)]. FISH analysis of the aberrant X chromosome showed the presence of two centromeres, two copies of the XIST gene and two copies of the SHOX gene. CONCLUSIONS: The presence of two XIST genes on the isodicentric X chromosome with Xq deletion indicates the inactivation of this chromosome. This inactivation also concerned the pseudoautosomal regions which caused haploinsufficiency of the SHOX genes. The girls were treated with growth hormones. The critical region (Xq23 to Xq28) for the ovarian function was deleted in both patients, but the gonadal function was variable. .


Subject(s)
Chromosomes, Human, X , Dwarfism/genetics , Growth/genetics , Puberty/genetics , Sex Chromosome Aberrations , Sexual Maturation/genetics , Female , Homeodomain Proteins/genetics , Humans , Mosaicism , Ovary/physiopathology , RNA, Long Noncoding/genetics , Short Stature Homeobox Protein
4.
J Clin Endocrinol Metab ; 98(10): 4013-22, 2013 Oct.
Article in English | MEDLINE | ID: mdl-24001750

ABSTRACT

BACKGROUND: The most important reason for treating children with Prader-Willi syndrome (PWS) with GH is to optimize their body composition. OBJECTIVES: The aim of this ongoing study was to determine whether long-term GH treatment can counteract the clinical course of increasing obesity in PWS by maintaining the improved body composition brought during early treatment. SETTING: This was a multicenter prospective cohort study. METHODS: We have been following 60 prepubertal children for 8 years of continuous GH treatment (1 mg/m(2)/d ≈ 0.035 mg/kg/d) and used the same dual-energy x-ray absorptiometry machine for annual measurements of lean body mass and percent fat. RESULTS: After a significant increase during the first year of GH treatment (P < .0001), lean body mass remained stable for 7 years at a level above baseline (P < .0001). After a significant decrease in the first year, percent fat SD score (SDS) and body mass index SDS remained stable at a level not significantly higher than at baseline (P = .06, P = .14, resp.). However, body mass index SDSPWS was significantly lower after 8 years of GH treatment than at baseline (P < .0001). After 8 years of treatment, height SDS and head circumference SDS had completely normalized. IGF-1 SDS increased to +2.36 SDS during the first year of treatment (P < .0001) and remained stable since then. GH treatment did not adversely affect glucose homeostasis, serum lipids, blood pressure, and bone maturation. CONCLUSION: This 8-year study demonstrates that GH treatment is a potent force for counteracting the clinical course of obesity in children with PWS.


Subject(s)
Body Composition/drug effects , Human Growth Hormone/therapeutic use , Obesity/drug therapy , Prader-Willi Syndrome/drug therapy , Absorptiometry, Photon , Adolescent , Body Height/drug effects , Bone Density/drug effects , Child , Child, Preschool , Disease Progression , Female , Human Growth Hormone/pharmacology , Humans , Male , Obesity/diagnostic imaging , Prader-Willi Syndrome/diagnostic imaging , Prospective Studies , Treatment Outcome
5.
Int J Clin Pract ; 66(9): 834-42, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22897460

ABSTRACT

AIMS: To assess the extent of reduction in blood pressure (BP) of aliskiren/amlodipine combination therapy compared with amlodipine monotherapy in moderate-to-severe hypertensive patients. METHODS: This was an 8-week multicentre, randomised, double-blind study. After a 1-to 4-week washout period, eligible patients [mean sitting systolic blood pressure (msSBP) ≥ 160 to < 200 mmHg] were randomised to receive a once-daily dose of aliskiren/amlodipine 150/5mg (n = 244) or amlodipine 5 mg (n = 241) for 1 week, followed by up-titration to aliskiren/amlodipine 300/10 mg or amlodipine 10 mg for 7 weeks. Efficacy outcome measures included change from baseline to week 8 endpoint in msSBP (primary endpoint), mean sitting diastolic blood pressure (msDBP), and BP control rate (< 140/90 mmHg). Safety was assessed by monitoring and recording all adverse events (AEs) and laboratory abnormalities. RESULTS: Patients' demographic characteristics were balanced between the two groups, mean baseline BP being 171.0/94.3 mmHg for aliskiren/amlodipine and 171.8/95.6 mmHg for amlodipine. Of 485 randomised patients, 433 (89.3%) completed the study. At week 8 endpoint, combination therapy resulted in significantly greater msSBP/msDBP reductions and BP control rate, compared with monotherapy (all: p ≤ 0.0001). The overall incidence of AEs was similar between the two groups. The most commonly reported AE was peripheral oedema with the incidence lower for combination therapy (14.4%) than for monotherapy (18.3%). CONCLUSION: In this population with considerably elevated BP, use of aliskiren/amlodipine combination showed significantly greater BP reductions and allowed more patients to achieve BP control compared with amlodipine monotherapy, with no additional safety concerns.


Subject(s)
Amides/therapeutic use , Amlodipine/therapeutic use , Antihypertensive Agents/therapeutic use , Fumarates/therapeutic use , Hypertension/drug therapy , Aged , Double-Blind Method , Drug Combinations , Female , Humans , Male , Middle Aged , Treatment Outcome
6.
Vet Parasitol ; 159(1): 60-8, 2009 Jan 22.
Article in English | MEDLINE | ID: mdl-19019546

ABSTRACT

The aim of this experiment conducted at four sites in Switzerland was to investigate the transmission and infectivity of the two main helminth parasite species of poultry (Ascaridia galli and Heterakis gallinarum) in outdoor runs with two different stocking rates. Additionally, the influence of a simple management practice (mowing of run) on helminth transmission was studied. Three run types were created on each site: runs C served as control (stocking rate 10 m(2)/hen, no management), runs B corresponded to runs C but were managed (10 m(2)/hen, management). In runs A stocking rates were doubled compared to control runs (5m(2)/hen, no management). During two subsequent layer flocks, a set of parasitological parameters (faecal egg counts (FECs), prevalence, worm burdens in hens and in tracer animals, helminth eggs in soil) as well as parameters describing the run vegetation were determined. The increased stocking rate (runs A) led to a larger proportion of bare soil and to a reduction of the average vegetation height. In runs with a lower stocking rate (B and C), the proportion of bare soil did not increase during the experimental period. Irrespective of the run type, numbers of helminth eggs in the soil decreased significantly with an increasing distance to the hen houses, while the percentage of ground coverage as well as vegetation height increased. However, across runs the correlation between the percentage of ground cover and the values of eggs per gram soil between runs was very low (r(2)=0.0007, P=0.95) indicating a non-causal relationship. Significant differences in FEC were found in flock 2 (P<0.001): FEC of hens in managed runs B were 24% lower (P<0.05) than those of the control animals. Although not significant, the corresponding prevalence was lower (-9.7%) in hens from managed runs as well. Hens from runs with a high stocking rate (A) had significantly higher FEC than hens from control runs (C). In flock 2 management (n.s.) and higher stocking rates (-62%, P<0.05) decreased the worm burdens. Tracer animals from runs with a high stocking rate (A) had significantly higher FEC than tracers from runs B and C in two tracer series. This was not reflected in the worm burdens. Overall, the stocking rate of hens in the outdoor run seemed not to influence the transmission patterns of A. galli and H. gallinarum and repeated mowing of runs did not reduce helminth infections. Lower stocking rates, however, led to a substantial improvement of the run vegetation.


Subject(s)
Chickens/parasitology , Feces/parasitology , Helminthiasis, Animal/parasitology , Helminths/isolation & purification , Housing, Animal/standards , Intestinal Diseases, Parasitic/parasitology , Poultry Diseases/parasitology , Animals , Ascaridia , Carotenoids , Chickens/physiology , Crowding , Female , Intestinal Diseases, Parasitic/veterinary , Parasite Egg Count/veterinary , Population Density , Soil/parasitology , Switzerland
7.
Ann Bot ; 102(6): 979-87, 2008 Dec.
Article in English | MEDLINE | ID: mdl-18845664

ABSTRACT

BACKGROUND AND AIMS: Molecular experiments suggest that the regulation of the biosynthesis of condensed tannin (CT) is sensitive to the presence of plant enemies. The enemy-specific response of CT concentrations to simulated attacks by pathogenic fungi, bacteria or herbivores was studied in Onobrychis viciifolia grown at four levels of nutrient availability. It was hypothesized that CT concentrations increase in response to an attack, and that constitutive and induced levels of CT are higher at low than at high nutrient availability. Investment in CT was also predicted to be negatively related to plant growth. METHODS: Recently discovered substances by which plants recognize their opponents (i.e. elicitors) were used to simulate attacks to Onobrychis viciifolia grown at 0.0027, 0.075, 0.67 or 2 mm phosphorus in the nutrient solution. KEY RESULTS: Relative growth rate and final biomass (P < 0.001) were highest at 0.67 mm of phosphorus. CT concentrations decreased with increasing phosphorus availability, from 94.9 to 69.0 mg g(-1) leaf dry weight (P < 0.001). Compared with unscathed plants, sterile mere mechanical wounding reduced tannin concentrations from 83.8 to 69.3 mg g(-1) leaf dry weight (P < 0.01). Local CT concentrations were higher when wounded leaves were additionally treated with fungal (+15.9 %), bacterial (+19.6 %) or insect (+31.0 %) elicitors (each elicitor; P < 0.05); however, only the insect elicitor (saliva of the lepidopteron Spodoptera littoralis) induced CT concentrations higher than those of unscathed leaves. CONCLUSIONS: CT concentrations were inducible in the vicinity of the wound but the level of induction was unrelated to the nutrient status of the plant. There was no evidence of a growth-defence trade-off. The inverse relationship between CT concentrations and nutrient availability appears to reflect passive growth dilution at high nutrient availability, rather than surplus CT production at low nutrient availability.


Subject(s)
Fabaceae/growth & development , Plant Leaves/metabolism , Predatory Behavior , Proanthocyanidins/metabolism , Animals , Biomass , Carbohydrates/analysis , Nitrogen/metabolism , Phosphorus/metabolism , Proanthocyanidins/analysis
8.
Ann Bot ; 99(1): 111-20, 2007 Jan.
Article in English | MEDLINE | ID: mdl-17210606

ABSTRACT

BACKGROUND AND AIMS: Condensed tannins (CTs) in the diet affect consumers in a concentration-dependent manner. Because of their importance in plant defence against herbivores and pathogens as well as their potential application against gastrointestinal parasites of ruminants in agronomy, an understanding of the seasonal dynamics of CT concentrations during plant growth is essential. METHODS: Over a vegetation period, CT concentrations in leaves, stems and roots and the biomass proportions between these organs were investigated in Onobrychis viciifolia, Lotus corniculatus and Cichorium intybus. Based on the experimental data, a model has been suggested to predict CT concentrations in harvestable biomass of these species. KEY RESULTS: During the experiment, leaf mass fractions of plants decreased from 85, 64, 85 to 30, 18, 39 % d. wt in Onobrychis, Lotus and Cichorium, respectively, and proportions of stems and roots increased accordingly. While CT concentrations almost doubled in leaves in Onobrychis (from 52 to 86 mg g(-1) d. wt, P<0.001) and Lotus (from 25 to 54 mg g(-1) d. wt, P<0.001), they were stable at low levels in expanding leaves of Cichorium (5 mg g(-1) d. wt) and in stems and roots of all investigated species. Due to an inverse effect of the increasing CT concentrations in leaves and simultaneous dilution from increasing proportions of 'CT-poor' stems, CT concentrations in harvestable biomass were stable over time in all investigated species: 62, 26 and 5 mg g(-1) d. wt for Onobrychis, Lotus and Cichorium, respectively. CONCLUSIONS: As a consequence of the unequal distribution of tannins in different plant parts and due to the changing biomass proportions between them, various herbivores (e.g. a leaf-eating insect and a grazing ruminant) may find not only different concentrations of CT in their diets but also different CT dynamics during the season. For the prediction of seasonal variations of CT concentrations, biomass allocation and accumulation of none-CT plant material are likely to be as important predictors as the knowledge of CT synthesis and its regulation.


Subject(s)
Cichorium intybus/metabolism , Lotus/metabolism , Tannins/biosynthesis , Biomass , Cichorium intybus/growth & development , Fabaceae/growth & development , Fabaceae/metabolism , Lotus/growth & development , Models, Biological , Plant Leaves/growth & development , Plant Leaves/metabolism , Plant Roots/growth & development , Plant Roots/metabolism , Plant Stems/growth & development , Plant Stems/metabolism , Seasons
10.
Mol Biol Rep ; 28(1): 9-17, 2001 Mar.
Article in English | MEDLINE | ID: mdl-11710567

ABSTRACT

We calculated nucleotide distribution curves along the DNA molecules of the human chromosomes 21 and 22, their correlations in more than 10,000 equidistant positions, and subjected the correlations to cluster analysis. The cluster analysis demonstrated that both DNA molecules were composed of two types of segments exhibiting qualitatively different correlations. The segments differed most in the correlation of the distribution curves of cytosine and guanine, which was very high in type I segments but weak in type II segments. The type I and II segments also significantly differed in the correlations of the distribution curves of adenine with thymine. In addition, adenine strongly anticorrelated with cytosine but this anticorrelation was uniform along both chromosomes and, therefore, it did not contribute to the distinction of the two types of segments. The segments were up to 100 kbp long but they had nothing in common with isochores. Building blocks of the mosaic structure of the DNA molecules of the human chromosomes 21 and 22 are very similar but different in several interesting aspects from those of E. coli.


Subject(s)
Chromosomes, Human, Pair 21 , Chromosomes, Human, Pair 22 , DNA/chemistry , DNA, Bacterial/chemistry , Escherichia coli/genetics , Humans , Nucleic Acid Conformation , Repetitive Sequences, Nucleic Acid
11.
Bioorg Med Chem ; 9(9): 2461-6, 2001 Sep.
Article in English | MEDLINE | ID: mdl-11553487

ABSTRACT

Artificial enzymes can be created by covalent attachment of a catalytic active group to a protein scaffold. Recently, we assembled an artificial transaminase by conjugation of intestinal fatty acid binding protein (IFABP) with a pyridoxamine derivative via a disulfide bond; the resulting construct catalyzed a transamination reaction 200-fold faster than free pyridoxamine. To identify the origin of this increased catalytic efficiency computer modeling was first used to identify two putative residues, Y14 and R126, that were in close proximity to the gamma-carboxylate group of the substrate, alpha-ketoglutartate. These positions were mutated to phenylalanine and methionine, respectively, and used to prepare semisynthetic transaminases by conjugation to pyridoxamine (Px) or an N-methylated derivative (MPx). Kinetic analysis of the resulting constructs showed that the R126M mutation reduced substrate affinity 3- to 6-fold while the additional Y14F mutation had a negligible effect. These results are consistent with a model for substrate recognition that involves an electrostatic interaction between the cationic guanidinium group of R126 and the anionic carboxylate from the substrate. Interestingly, one of the conjugates that contains an N-methylated pyridoxamine catalyzes a transamination reaction with a k(cat)' value of 1.1h(-1) which is the fastest value for k(cat) we have thus far obtained and is 34-fold greater than that for the free cofactor in the absence of the protein.


Subject(s)
Carrier Proteins/chemistry , Molecular Mimicry , Neoplasm Proteins , Pyridoxamine/chemistry , Transaminases/chemical synthesis , Tumor Suppressor Proteins , Amino Acid Substitution , Animals , Catalytic Domain , Computer Simulation , Fatty Acid-Binding Protein 7 , Fatty Acid-Binding Proteins , Humans , Intestines/chemistry , Kinetics , Models, Molecular , Mutagenesis, Site-Directed , Protein Binding , Substrate Specificity , Transaminases/chemistry
12.
Thromb Res ; 103(1): 3-8, 2001 Jul 01.
Article in English | MEDLINE | ID: mdl-11434940

ABSTRACT

Individuals with more than one defect in the natural anticoagulant system exhibit an increased risk for thrombosis. We report on a family with two cases of combined protein C (PROC) and protein S (PROS) deficiency, five cases of isolated PROC deficiency Type I, and two cases of isolated PROS deficiency Type I. PROC and PROS deficiency were documented by functional and immunologic tests. The sequencing of all exons and splice junctions of the PROC gene led to the identification of a new, unpublished G-->A transition at nt 8490, leading to an exchange of alanine 259 by threonine. The mutation was present in all family members with PROC deficiency. The carriers of the isolated PROC mutation were asymptomatic at ages of 4, 7, 10, 11, and 80 years. The combination of the PROC mutation with a PROS deficiency in two family members triggered venous thromboembolism at age 31 and 6 years, respectively. The PROS deficiency was associated with complete exclusion of one PROS allele. Two family members with isolated PROS deficiency are still asymptomatic at age 21 and 9 years, respectively. Our findings in this family suggest that the heterozygous mutation at codon 259 of the PROC gene represents a mild thrombotic risk factor and only confers a high thrombotic risk in combination with a second defect, such as the complete exclusion of one PROS allele.


Subject(s)
Mutation, Missense , Protein C/genetics , Protein S/genetics , Venous Thrombosis/etiology , Adult , Aged , Aged, 80 and over , Alleles , Child , Child, Preschool , DNA Mutational Analysis , Family Health , Heterozygote , Humans , Loss of Heterozygosity , Middle Aged , Risk Factors , Severity of Illness Index
13.
Bioconjug Chem ; 12(3): 385-90, 2001.
Article in English | MEDLINE | ID: mdl-11353536

ABSTRACT

Artificial enzymes can be created by covalent conjugation of a catalytic active group to a protein scaffold. Here, two transamination catalysts were designed via computer modeling and assembled by chemically conjugating a pyridoxamine moiety within the large cavity of intestinal fatty acid binding protein. Each catalyst included a lysine residue, introduced via site-directed mutagenesis, that promotes catalysis by covalent interactions with the pyridoxamine group. Evidence for such interactions include the formation of a Schiff base with the pyridoxal form of the catalyst and a rate versus pH dependence that is bell shaped; both of these features are manifested in natural transaminases. The resulting constructs operate with high enantioselectivity (83-94% ee) and increase the rate of reaction as much as 4200-fold over the rate in the absence of the protein; this is a modest (12-fold) increase in catalytic efficiency (kcat/KM) compared to the conjugate lacking the lysine residue. Most importantly, these artificial aminotransferases are the first examples of designed bioconjugates capable of covalent catalysis, highlighting the potential of this chemogenetic approach.


Subject(s)
Enzymes/chemical synthesis , Neoplasm Proteins , Carrier Proteins/chemistry , Catalysis , Catalytic Domain , Drug Design , Enzymes/metabolism , Fatty Acid-Binding Proteins , Hydrogen-Ion Concentration , Kinetics , Lysine/chemistry , Models, Molecular , Pyridoxamine/chemistry , Stereoisomerism , Transaminases/chemical synthesis , Transaminases/metabolism
14.
Biochem Biophys Res Commun ; 280(2): 567-73, 2001 Jan 19.
Article in English | MEDLINE | ID: mdl-11162557

ABSTRACT

The human genome is described in the literature as being composed of the isochores, i.e., long (hundreds of kilobases) segments with a homogeneous (G + C) content. We calculated the (G + C) content variations along the DNA molecules of the human chromosomes 21 and 22 and found the variations to be higher everywhere compared to the randomized sequences. Hence the (G + C) content is certainly not homogeneous on the isochore scale in the two human chromosomes. In addition, we found no significant difference between the two human molecules and the genome of E. coli regarding the (G + C) content variations. Hence no isochores are either present in the DNA molecules of the human chromosomes 21 and 22, or the isochores are also present in the genome of Escherichia coli. In any case, the present communication demonstrates that the isochores should be defined in unambiguous molecular terms if they are to be used for an up-to-date genome structure characterization.


Subject(s)
Chromosomes, Human, Pair 21/genetics , Chromosomes, Human, Pair 22/genetics , GC Rich Sequence/genetics , Algorithms , Base Composition , Chromosomes, Bacterial/genetics , Genome, Bacterial , Humans
15.
Pharm World Sci ; 22(4): 127-9, 2000 Aug.
Article in English | MEDLINE | ID: mdl-11103381

ABSTRACT

Following craniotomy for a medulloblastoma in the posterior cranial fossa, a 6-year old girl developed a ventriculitis with coagulase negative staphylococci associated with the use of a ventriculostomy. Treatment with intravenous (i.v.) and intraventricular (ivt) vancomycin resulted in negative cultures of the cerebrospinal fluid, but had to be stopped because of a severe allergic skin reaction. Teicoplanin was administered i.v. (240 mg once daily) and ivt (10 mg once daily), resulting in high teicoplanin CSF levels that were used to model the pharmacokinetics of ivt teicoplanin in this patient. No signs of recurrent infection or adverse events occurred. It is concluded that a pharmacokinetic model can be derived from this case that can be used as prior to guide teicoplanin intraventricular therapy in other patients.


Subject(s)
Anti-Bacterial Agents/pharmacokinetics , Cerebral Ventricles , Encephalitis/drug therapy , Staphylococcal Infections/drug therapy , Teicoplanin/pharmacokinetics , Child , Encephalitis/metabolism , Female , Humans , Injections, Intraventricular , Staphylococcal Infections/metabolism , Teicoplanin/administration & dosage
16.
Bioorg Med Chem Lett ; 10(18): 2091-5, 2000 Sep 18.
Article in English | MEDLINE | ID: mdl-10999478

ABSTRACT

An N-methylated, cationic pyridoxamine conjugation reagent was synthesized and tethered via a disulfide bond to a cysteine residue inside the cavity of intestinal fatty acid binding protein. The conjugate was characterized and the kinetic parameters compared to its nonmethylated pyridoxamine analogue. Kinetic isotope effects were used for further mechanistic analysis. Taken together, these experiments suggest that a step distinct from deprotonation of the ketimine in the pyridoxamine to pyridoxal reaction is what limits the rate of the artificial transaminase IFABP-Px. However, the internal energetics of reactions catalyzed by the conjugate containing the N-methylated cofactor appear to be different suggesting that the MPx reagent will be useful in future experiments designed to alter the catalytic properties of semisynthetic transaminases.


Subject(s)
Carrier Proteins/chemistry , Neoplasm Proteins , Pyridoxamine/chemistry , Transaminases/chemistry , Carrier Proteins/metabolism , Catalysis , Cations , Fatty Acid-Binding Proteins , Kinetics , Models, Molecular , Molecular Mimicry , Pyridoxamine/metabolism , Transaminases/metabolism
17.
Br J Haematol ; 110(2): 469-71, 2000 Aug.
Article in English | MEDLINE | ID: mdl-10971410

ABSTRACT

Genetic risk factors play an important role in the aetiology of vascular diseases. The insertion/deletion polymorphism (4G/5G) in the promotor region of the plasminogen activator inhibitor 1 (PAI-1) gene has been associated with an increased risk of myocardial infarction. We investigated 136 patients with minor stroke (MS) and transient ischaemic attack (TIA) and found a prevalence of 0.32 for the 4G/4G genotype in patients compared with 0.42 in 115 age-matched healthy controls. The 4G/4G genotype was significantly less frequent among 61 patients symptomatic before the age of 60 years (prevalence 0.20) than in 75 patients symptomatic after 60 years of age (prevalence 0.42; odds ratio). Our results indicate that the 4G/4G genotype is not a risk factor for MS or TIA and may even be protective in young patients.


Subject(s)
Plasminogen Activator Inhibitor 1/genetics , Promoter Regions, Genetic , Stroke/genetics , Case-Control Studies , Female , Genotype , Humans , Male , Middle Aged , Polymerase Chain Reaction , Polymorphism, Genetic , Risk Factors
18.
Biochem Biophys Res Commun ; 272(2): 571-5, 2000 Jun 07.
Article in English | MEDLINE | ID: mdl-10833453

ABSTRACT

We calculated correlations of the nucleotide distributions along the E. coli genome. Subsequent cluster analysis of the correlation distributions showed that the genome was composed of two qualitatively different types of nucleotide sequences. The first type exhibited strong correlations of the genomic distributions of A with T and G with C, and high anticorrelations of A with C and G with T. In contrast, the second type was characterized by weak or negligible correlations typical of randomized sequences. Both types of sequences were almost equally abundant in the E. coli genome and their length varied from several hundred nucleotides to about 70 kilobases. They were not disjunct with respect to their (G + C) content but the high correlations and anticorrelations were rather characteristic for (A + T)-rich genomic segments. We offer possible explanations of the mosaic structure of the E. coli genome.


Subject(s)
DNA, Bacterial/genetics , Escherichia coli/genetics , Genome, Bacterial , Base Composition , Base Sequence , DNA, Bacterial/chemistry , Evolution, Molecular , Statistical Distributions
19.
J Theor Biol ; 201(2): 141-56, 1999 Nov 21.
Article in English | MEDLINE | ID: mdl-10556022

ABSTRACT

We calculated the variation coefficients of the mononucleotide and short oligonucleotide distributions in over 1700 long genomic sequences originating from six organisms to demonstrate that the human and Escherichia coli genomic sequences were the least and the most uniform, respectively. The most non-random genomic distributions were exhibited by the four canonical nucleotides, followed by the strong and weak nucleotides, while the distributions of purine or pyrimidine nucleotides and especially the distributions of (A+C) and (G+T) were significantly more uniform even in the human genome. In the human and mouse genomes, the highest coefficients of variation were further observed with the oligonucleotides where CG was combined with the strong nucleotides while its combination with the weak nucleotides significantly decreased the variation which, however, was still very high. High variation was also exhibited by the remaining oligonucleotides composed exclusively of the strong nucleotides or those containing only weak nucleotides. On the other hand, the distributions of oligonucleotides containing similar and especially the same numbers of the strong and weak nucleotides, but no CG or TA dinucleotide, were the most uniform. The information following from the present analysis will be useful not only in the identification of important genomic regions but also in computer simulations of the genomic nucleotide sequences in order to trace and reproduce the pathways of genome evolution.


Subject(s)
Evolution, Molecular , Genome , Oligonucleotides/genetics , Sequence Analysis, DNA , Animals , Arabidopsis/genetics , Drosophila melanogaster/genetics , Electronic Data Processing , Escherichia coli/genetics , Genome, Bacterial , Genome, Fungal , Genome, Human , Genome, Plant , Humans , Mice , Saccharomyces cerevisiae/genetics
20.
J Biomol Struct Dyn ; 17(2): 267-73, 1999 Oct.
Article in English | MEDLINE | ID: mdl-10563576

ABSTRACT

We have analyzed correlations of nucleotide distributions along more than 50 megabases of the longest sequenced parts of the human, mouse, Drosophila, Arabidopsis, yeast, E.coli and three kinds of viral genomes. The strongest correlations were observed between the distributions of C and G, in particular in the genome of Drosophila. This correlation was much weaker, though still strong, in the human genome and E.coli that exhibited the same level of this correlation. The C/G correlation hardly originates from the isochores because the isochores were not reported to occur in the genomes of Drosophila and E. coil. The genomic distribution curves of adenine and thymine were also positively correlated in all analyzed organisms except for the yeast where they were anticorrelated. Still stronger anticorrelations were, however, observed between the genomic distributions of A and C and between G and T. These genomic distributions anticorrelated almost generally and very strong. These anticorrelations are likely to originate from point mutations resulting from unrepaired GA mispairing as a replication intermediate. The C/A or G/T anticorrelation or compensation is a very strong and general new phenomenon that shapes the genomic nucleotide sequences.


Subject(s)
Genome , Sequence Analysis, DNA , Animals , Arabidopsis/genetics , Drosophila melanogaster/genetics , Escherichia coli/genetics , Genome, Bacterial , Genome, Fungal , Genome, Plant , Genome, Viral , Herpesviridae/genetics , Hominidae/genetics , Humans , Mice/genetics , Models, Statistical , Retroviridae/genetics , Saccharomyces cerevisiae/genetics , Species Specificity
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