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1.
Mycorrhiza ; 26(6): 497-513, 2016 Aug.
Article in English | MEDLINE | ID: mdl-26968744

ABSTRACT

Arbutoid mycorrhizas of Comarostaphylis arbutoides (Arbutoidea, Ericaceae) from neotropical montane forests are rarely described. To date, only mycorrhizal associations with the fungal species Leccinum monticola, Leotia lubrica and Sebacina sp. are known from literature. The genus Cortinarius is one of the most species-rich ectomycorrhizal taxa with over 2000 assumed species. In this study, two sites in the Cordillera de Talamanca of Costa Rica were sampled, where Com. arbutoides is endemic and grows together with Quercus costaricensis. Using a combined method of rDNA sequence analysis and morphotyping, 33 sampled mycorrhizal systems of Cortinarius were assigned to the subgenera Dermocybe, Phlegmacium and Telamonia. Specific plant primers were used to identify the host plant. Here, we present the phylogenetic data of all found Cortinarii and describe four of the arbutoid mycorrhizal systems morphologically and anatomically.


Subject(s)
Cortinarius/classification , DNA, Fungal/genetics , Mycorrhizae/classification , Phylogeny , Quercus/microbiology , Costa Rica , DNA, Ribosomal Spacer/genetics
2.
Mycorrhiza ; 25(2): 109-20, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25033922

ABSTRACT

Arbutoid mycorrhizal plants are commonly found as understory vegetation in forests worldwide where ectomycorrhiza-forming trees occur. Comarostaphylis arbutoides (Ericaceae) is a tropical woody plant and common in tropical Central America. This plant forms arbutoid mycorrhiza, whereas only associations with Leccinum monticola as well as Sebacina sp. are described so far. We collected arbutoid mycorrhizas of C. arbutoides from the Cerro de la Muerte (Cordillera de Talamanca), Costa Rica, where this plant species grows together with Quercus costaricensis. We provide here the first evidence of mycorrhizal status for the Ascomycete Leotia cf. lubrica (Helotiales) that was so far under discussion as saprophyte or mycorrhizal. This fungus formed arbutoid mycorrhiza with C. arbutoides. The morphotype was described morphologically and anatomically. Leotia cf. lubrica was identified using molecular methods, such as sequencing the internal-transcribed spacer (ITS) and the large subunit (LSU) ribosomal DNA regions, as well as phylogenetic analyses. Specific plant primers were used to confirm C. arbutoides as the host plant of the leotioid mycorrhiza.


Subject(s)
Ericaceae/microbiology , Fungi/classification , Fungi/isolation & purification , Mycorrhizae/classification , Mycorrhizae/isolation & purification , Phylogeny , Costa Rica , Fungi/genetics , Fungi/growth & development , Molecular Sequence Data , Mycorrhizae/genetics , Mycorrhizae/growth & development , Plant Roots/microbiology
3.
Water Sci Technol ; 59(3): 543-8, 2009.
Article in English | MEDLINE | ID: mdl-19214009

ABSTRACT

Investigations are presented for the development and testing of a sensor for the early stage detection and monitoring of biofilm formation. The sensor is based on the well known quartz crystal microbalance technology (QCM). The QCM detectors are integrated into the water flow system and provide continuous in-situ signals. The main objectives of the research are the evaluation of optimal operation conditions and the modification of the quartz resonator surface promoting a preferred cell attachment onto the quartz sensor surface. The miniaturization degree of the mass sensitive detector modules permits the integration into industrial plants, e.g., in order to control and ensure perfect hygienic conditions. First results of the lab study using Pseudomonas putida cultures are presented and discussed.


Subject(s)
Biofilms/growth & development , Biosensing Techniques/instrumentation , Environmental Monitoring/instrumentation , Quartz/chemistry , Water Purification/instrumentation , Concanavalin A/chemistry , Crystallization , Disinfectants/chemistry , Phenanthrenes/chemistry , Pseudomonas putida/physiology , Temperature , Time Factors
4.
Mycorrhiza ; 17(4): 279-290, 2007 Jun.
Article in English | MEDLINE | ID: mdl-17235552

ABSTRACT

Ectomycorrhizal (ECM) communities were assessed on a 720 m(2) plot along a chronosequence of red oak (Quercus rubra) stands on a forest reclamation site with disturbed soil in the lignite mining area of Lower Lusatia (Brandenburg, Germany). Adjacent to the mining area, a red oak reference stand with undisturbed soil was investigated reflecting mycorrhiza diversity of the intact landscape. Aboveground, sporocarp surveys were carried out during the fruiting season in a 2-week interval in the years 2002 and 2003. Belowground, ECM morphotypes were identified by comparing sequences of the internal transcribed spacer regions from nuclear rDNA with sequences from the GenBank database. Fifteen ECM fungal species were identified as sporocarps and 61 belowground as determined by morphological/anatomical and molecular analysis of their ectomycorrhizas. The number of ECM morphotypes increased with stand age along the chronosequence. However, the number of morphotypes was lower in stands with disturbed soil than with undisturbed soil. All stands showed site-specific ECM communities with low similarity between the chronosequence stands. The dominant ECM species in nearly all stands was Cenococcum geophilum, which reached an abundance approaching 80% in the 21-year-old chronosequence stand. Colonization rate of red oak was high (>95%) at all stands besides the youngest chronosequence stand where colonization rate was only 15%. This supports our idea that artificial inoculation with site-adapted mycorrhizal fungi would enhance colonization rate of red oak and thus plant growth and survival in the first years after outplanting.


Subject(s)
Ecosystem , Mycorrhizae/classification , Quercus , DNA, Fungal/genetics , DNA, Ribosomal Spacer/genetics , Environmental Monitoring , Gardening/methods , Germany , Mining , Mycological Typing Techniques , Mycorrhizae/genetics , Plant Roots/microbiology , Quercus/microbiology , Species Specificity , Time Factors
5.
Anal Bioanal Chem ; 383(5): 747-51, 2005 Nov.
Article in English | MEDLINE | ID: mdl-15983768

ABSTRACT

Calorimetric methods are used in combination with online oxygen measurement (using an amperometric sensor) and determination of the optical density (using a fibre optic sensor) to investigate microbial growth behaviour. The calorimetric curves of different batch experiments show a characteristic and reproducible course. Changes in the slope of the DeltaT-time curves indicate the effects of limiting factors on the microbial activity during the cultivation. A first limitation could be correlated with the depletion of oxygen in the medium; a second correlates with the depletion of the carbon source. Measurements of optical density in some cases provide reliable information about the growth of a microorganism culture. Our measurements show a good correlation of the universal calorimetric signal (heat-time curve) to the signal of the miniaturised photometric (OD) sensor.


Subject(s)
Calorimetry/instrumentation , Colony Count, Microbial/instrumentation , Oxygen/analysis , Paracoccus denitrificans/isolation & purification , Paracoccus denitrificans/metabolism , Photometry/instrumentation , Transducers , Calorimetry/methods , Cell Proliferation , Cell Survival , Colony Count, Microbial/methods , Equipment Design , Equipment Failure Analysis , Fiber Optic Technology/instrumentation , Fiber Optic Technology/methods , Oxygen/metabolism , Photometry/methods , Reproducibility of Results , Sensitivity and Specificity , Systems Integration
6.
Mycorrhiza ; 14(3): 193-202, 2004 Jul.
Article in English | MEDLINE | ID: mdl-12942357

ABSTRACT

Scots pine (Pinus sylvestris L.) stands cover large areas in the Lusatian and the Middle German lignite mining districts. Due to adverse chemical substrate conditions, the root systems of the trees are restricted to the ameliorated top-spoil and the organic forest floor layers. To investigate functioning of fine root systems under the prevailing site factors, we studied mycorrhizal colonization rate and frequency as well as mycorrhizal diversity, vitality and growth phases in Scots pine ecosystems along a chronosequence in both mining districts. Mycorrhizal rate was close to 100% in both districts. Mycorrhizal abundance was higher in the organic forest floor layer than the mineral soil layer. In total, 25 morphotypes were recorded. Diversity differed between the districts. The mycorrhizae of Amphinema byssoides, Tuber puberulum, Pinirhiza discolor, Pinirhiza cf. bicolorata and E-type were present in both mining areas. These morphotypes are typical of nutrient-rich soils with high pH values. Compared with the undisturbed sites, vitality of mycorrhizae was very high at the test sites on spoil substrate, correlating with the high growth dynamics of mycorrhizae at recultivation sites. A relatively high carbon flow to the mycorrhizal root systems at these sites seems likely. Thus, mycorrhizal root systems are able to cope with the ameliorated top-spoil and the organic layer. The main reason for the adaptation is the large number of ectomycorrhizal fungal species available in this area where Pinus sylvestris is indigenous.


Subject(s)
Coal Mining , Mycorrhizae/physiology , Pinus/microbiology , Biodiversity , Germany , Soil
7.
Naturwissenschaften ; 88(8): 322-9, 2001 Aug.
Article in English | MEDLINE | ID: mdl-11572012

ABSTRACT

The restoration of surface mining landscapes requries the (re)creation of ecosystems. In Lusatia (eastern Germany), large-scale open-cast lignite mining operations generated spoil dumps widely consisting of acidified, phytotoxic substrates. Amelioration and rehabilitation measures have been developed and applied to these substrates since the 1950s. However, it is still not clear whether these approaches are sustainable. This paper reports on collaborative research work into the ecological potential of forest ecosystem development on typical minesites in the Lusatian lignite district. At first sight, pine stands on minesites along a chronosequence comprising about 35 years did not show differences when compared with stands on non-mined sites of the general region. Furthermore, with some modification, conceptual models for flora and fauna succession in forest stands on non-mined sites seem to be applicable, at least for the early stages of forest ecosystem development. For example, soil organism abundance and activity at minesites had already reached levels typical of non-mined sites after about 20-30 years. In contrast, mine soils are very different from non-mined soils of the test region. Chemically, mine soil development is dominated by processes originating from pyrite oxidation. Geogenic, i.e. lignitic, soil organic carbon was shown to substitute for some functions of pedogenic soil organic matter. Rooting was hampered but not completely impeded in strongly acidified soil compartments. Roots and mycorrhizae are apparently able to make use of the characteristic heterogeneity of young mine soils. Considering these recent results and the knowledge accumulated during more than 30 years of research on minesite rehabilitation internationally, it can be stated that minesite restoration might be used as an ideal case study for forest ecosystem development starting at "point zero" on "terra nova".


Subject(s)
Coal Mining , Ecosystem , Soil Pollutants , Trees , Germany , Hydrogen-Ion Concentration , Iron/analysis , Sulfides/analysis , Time Factors
8.
Plant J ; 28(6): 633-42, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11851909

ABSTRACT

Benzoxazinoids are major compounds involved in chemical defence in grasses. These toxins are stored in the vacuole as glucosides. Two glucosyltransferases, BX8 and BX9, that catalyse this last step of benzoxazinoid biosynthesis have been isolated via functional cloning. No close relative of these maize genes was found among the known glucosyltransferases. The enzymes display a very high degree of substrate specificity. DIMBOA, the major benzoxazinoid in young maize, is the preferred substrate. Both genes are highly expressed in young maize seedlings, the developmental stage with the highest activity of benzoxazinoid biosynthesis. Bx8 is included in the cluster of DIMBOA biosynthesis genes located on the short arm of chromosome 4. Hence, the gene cluster comprises three different enzymatic functions and a complete set of genes for the biosynthesis of DIBOA glucoside. Bx9 mapped to chromosome 1. Expression of Bx8 and Bx9 in Arabidopsis corroborated the potency of the enzymes in detoxification of their substrates. This capacity might have implications for allelopathic interactions.


Subject(s)
Benzoxazoles/metabolism , Glucosyltransferases/metabolism , Isoenzymes/metabolism , Zea mays/metabolism , Base Sequence , Chromosome Mapping , Cloning, Molecular , DNA Primers , Glucosyltransferases/genetics , Isoenzymes/genetics , Molecular Sequence Data , Recombinant Proteins/metabolism , Zea mays/enzymology
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