Photoelectron Spectroscopy of Oppositely Charged Molecular Switches in the Aqueous Phase: Theory and Experiment.

XUV photoelectron spectroscopy (XPS) is a powerful method for investigating the electronic structures of molecules. However, the correct interpretation of results in the condensed phase requires theoretical models that account for solvation. Here we present experimental aqueous-phase XPS of two organic biomimetic molecular switches, NAIP and p-HDIOP. These switches are structurally similar, but have opposite charges and thus present a stringent benchmark for solvation models which need to reproduce the observed ΔeBE = 1.1 eV difference in electron binding energy compared to the 8 eV difference predicted in the gas phase. We present calculations using implicit and explicit solvent models. The latter employs the average solvent electrostatic configuration and free energy gradient (ASEC-FEG) approach. Both nonequilibrium polarizable continuum models and ASEC-FEG calculations give vertical binding energies in good agreement with the experiment for three different computational protocols. Counterions, explicitly accounted for in ASEC-FEG, contribute to the stabilization of molecular states and reduction of ΔeBE upon solvation.

Vibrational Coherence Spectroscopy Identifies Ultrafast Branching in an Iron(II) Sensitizer.

The introduction of N-heterocyclic carbene ligands has greatly increased the lifetimes of metal-to-ligand charge transfer states (MLCT) in iron(II) complexes, making them promising candidates for photocatalytic applications. However, the spectrally elusive triplet metal-centered state (3MC) has been suggested to play a decisive role in the relaxation of the MLCT manifold to the ground state, shortening their lifetimes and consequently limiting the application potential. In this work, time-resolved vibrational spectroscopy and quantum chemical calculations are applied to shed light on the 3MCs' involvement in the deactivation of the MLCT manifold of an iron(II) sensitizer. Two distinct symmetric Fe-L breathing vibrations at frequencies below 150 cm-1 are assigned to the 3MC and 3MLCT states by quantum chemical calculations. On the basis of this assignment, an ultrafast branching directly after excitation forms not only the long-lived 3MLCT but also the 3MC as an additional loss channel.

Effect of point mutations on the ultrafast photo-isomerization of Anabaena sensory rhodopsin.

Anabaena sensory rhodopsin (ASR) is a particular microbial retinal protein for which light-adaptation leads to the ability to bind both the all-trans, 15-anti (AT) and the 13-cis, 15-syn (13C) isomers of the protonated Schiff base of retinal (PSBR). In the context of obtaining insight into the mechanisms by which retinal proteins catalyse the PSBR photo-isomerization reaction, ASR is a model system allowing to study, within the same protein, the protein-PSBR interactions for two different PSBR conformers at the same time. A detailed analysis of the vibrational spectra of AT and 13C, and their photo-products in wild-type ASR obtained through femtosecond (pump-) four-wave-mixing is reported for the first time, and compared to bacterio- and channelrhodopsin. As part of an extensive study of ASR mutants with blue-shifted absorption spectra, we present here a detailed computational analysis of the origin of the mutation-induced blue-shift of the absorption spectra, and identify electrostatic interactions as dominating steric effects that would entail a red-shift. The excited state lifetimes and isomerization reaction times (IRT) for the three mutants V112N, W76F, and L83Q are studied experimentally by femtosecond broadband transient absorption spectroscopy. Interestingly, in all three mutants, isomerization is accelerated for AT with respect to wild-type ASR, and this the more, the shorter the wavelength of maximum absorption. On the contrary, the 13C photo-reaction is slightly slowed down, leading to an inversion of the ESLs of AT and 13C, with respect to wt-ASR, in the blue-most absorbing mutant L83Q. Possible mechanisms for these mutation effects, and their steric and electrostatic origins are discussed.

Sub-100 fs charge transfer in a novel donor-acceptor-donor triad organized in a smectic film.

Ultrafast transient absorption spectroscopy is performed on a novel donor-acceptor-donor triad made of two identical bisthiophene derivatives as electron donors and a central perylenediimide moiety as electron acceptor. The triad is extended at both ends by covalently bound siloxane chains that confer self-organisation into thin smectic films at ambient temperature. When diluted in chloroform, selective excitation of the donor moiety leads to resonance energy transfer within 130 fs to the acceptor moiety, followed by the formation of a charge transfer (CT) state in ~3 ps. The CT state recombines entirely on a 55 ps time scale. In the liquid crystal films, excitonic intermolecular coupling leads to significant changes in the dynamics. Most remarkably, ultrafast intra- and intermolecular CT state formation occurs in about 60 fs, i.e. on a time scale comparable to electronic coherence times. While the intra-molecular CT states recombine on the same time scale as in solution or even faster, inter-molecular CT states live for about 1 ns. Last, triplet states of the perylenediimide moiety dominate the differential absorption after ~1 ns. We anticipate that the fast recombination of intra-molecular CT states and the triplet state formation may severely limit the photo-current in these materials.

Formation dynamics and nature of tryptophan's primary photoproduct in aqueous solution.

The excited state quenching and photoproduct formation of tryptophan in water is studied by femtosecond transient absorption experiments covering the near-UV and Vis range of wavelengths. The quenching of the excited state absorption occurs simultaneously with the rise of a photoproduct characterized by two absorption bands at 350 nm and 425 nm. Both processes are characterized by the same biexponential kinetics, and the time constants found are in excellent agreement with previous time-resolved fluorescence measurements. By varying the pH and comparing with the transient spectra of Trp incorporated in a peptide where electron transfer is the dominant quenching mechanism, we suggest that the photoproduct is a zwitterionic form of Trp with the indole moiety protonated, formed via excited state proton transfer from the side chain amine group, in agreement with conclusions drawn from nanosecond experiments. The present work thus fills the gap between ultrafast fluorescence decay and nanosecond flash photolysis experiments, and pinpoints Trp's fluorescence quenching mechanism at acidic and neutral pH.

Absorption spectroscopy of three-dimensional bacteriorhodopsin crystals at cryogenic temperatures: effects of altered hydration.

A comparative study of absorption spectroscopy at 100 K has been performed on three-dimensional crystals of bacteriorhodopsin extracted from a lipidic cubic phase and on native purple membrane. A modified microspectrophotometer has been designed which yields absorption data with a high signal-to-noise ratio and remarkable reproducibility. Excellent agreement of the absorption spectra of the three-dimensional crystals and the purple membrane is observed provided that a rigorous crystal-handling procedure is followed. This result supports the equivalence of the protein structure in both the cubic phase crystals and the native purple membrane. On the other hand, it is shown that dramatic deviations of the crystal spectrum can be induced by minor changes in the extraction method. Exposure to air at room temperature can lead within a short time to an irreversible dehydration manifested by a distinct species with an absorption maximum at 500 nm. Exposure of the crystals to a buffer with lower ionic strength than the crystallization solution produces a different spectral form with an absorption maximum at 477 nm, which was assigned to a distorted protein conformation induced by osmotic stress. The extreme sensitivity of these crystals to experimental conditions is relevant for X-ray structural studies, in particular as different experimental treatments are implemented to trap the intermediates of the protein's photocycle.

Insights into excited-state and isomerization dynamics of bacteriorhodopsin from ultrafast transient UV absorption.

A visible-pump/UV-probe transient absorption is used to characterize the ultrafast dynamics of bacteriorhodopsin with 80-fs time resolution. We identify three spectral components in the 265- to 310-nm region, related to the all-trans retinal, tryptophan (Trp)-86 and the isomerized photoproduct, allowing us to map the dynamics from reactants to products, along with the response of Trp amino acids. The signal of the photoproduct appears with a time delay of approximately 250 fs and is characterized by a steep rise ( approximately 150 fs), followed by additional rise and decay components, with time scales characteristic of the J intermediate. The delayed onset and the steep rise point to an impulsive formation of a transition state on the way to isomerization. We argue that this impulsive formation results from a splitting of a wave packet of torsional modes on the potential surface at the branching between the all-trans and the cis forms. Parallel to these dynamics, the signal caused by Trp response rises in approximately 200 fs, because of the translocation of charge along the conjugate chain, and possible mechanisms are presented, which trigger isomerization.

Probing the ultrafast charge translocation of photoexcited retinal in bacteriorhodopsin.

The ultrafast evolution of the electric field within bacteriorhodopsin was measured by monitoring the absorption changes of a tryptophan residue after excitation of retinal. The Trp absorption decreases within the first 200 femtoseconds and then recovers on time scales typical for retinal isomerization and vibrational relaxation. A model of excitonic coupling between retinal and tryptophans shows that the signal reflects a gradual rise of the retinal difference dipole moment, which precedes and probably drives isomerization. The results suggest an intimate connection between the progressive dipole moment change and the retinal skeletal changes reported over the same time scale.

Femtosecond and picosecond fluorescence of native bacteriorhodopsin and a nonisomerizing analog.

The spectrally and temporally resolved fluorescence properties of native bacteriorhodopsin (bR) and bR reconstituted with a nonisomerizing analog of the retinal Schiff base (bR5.12) are examined. The first attempt to experimentally monitor the excited state relaxation processes in both type of pigments using ultrafast fluorescence spectroscopy is reported. The fluorescence is emitted from retinal molecules in an all-trans configuration. Substantial energy relaxation involves very fast intramolecular and intermolecular vibrational modes and these are shown to occur on a time scale faster than isomerization. The possible contribution of dielectric interaction between the retinal Schiff base and the protein environment for the excited state energy relaxation is discussed.

Spectral and kinetic fluorescence properties of native and nonisomerizing retinal in bacteriorhodopsin.

Steady-state and picosecond (ps) fluorescence studies of wild-type bacteriorhodopsin (wt-bR) and of a nonisomerizing analog locked in the all-trans configuration have been performed. Extending earlier work done by femtosecond absorption spectroscopy, we observe a strong similarity between both proteins in both fluorescence spectra and Stokes shift thus confirming the previous result that the fluorescent state I460 of the native bR proteins is in the all-trans configuration. Comparison of the spectra of fluorescence and stimulated emission of the locked pigments indicates the presence of an excited-state absorption situated around 750 nm. Upon increase of the excitation energy, the time-integrated fluorescence shows an interesting weak blue shift, which is identical for both pigments. Finally, we discuss the primary structural processes in retinal and in the protein that lead to the sub-100 fs formation of I460 and in particular to the considerable Stokes shift.

Optical signatures of energy-level statistics in a disordered quantum system

Time-resolved measurements of the resonant Rayleigh scattering from quantum well excitons are shown to provide information on the energy-level statistics of the localized exciton states. The signal transients are reproduced by a microscopic quantum model of the exciton two-dimensional motion in presence of spatially correlated disorder. This model allows quantitative determination of the average energy separation between the localized states. Here this quantity turns out to be only a few times smaller than the average disorder amplitude, proving that spatial correlation and quantum mechanics are equally important in the description of the exciton localization process.