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1.
Heliyon ; 5(11): e02877, 2019 Nov.
Article in English | MEDLINE | ID: mdl-31844750

ABSTRACT

On-demand resource provisioning and elasticity are two of the main characteristics of the cloud computing paradigm. As a result, the load on a cloud service provider (CSP) is not fixed and almost always a number of its physical resources are not used, called spare resources. As the CSPs typically don't want to be overprovisioned at any time, they procure physical resources in accordance to a pessimistic forecast of their loads and this leads to a large amount of spare resources most of the time. Some CSPs rent their spare resources with a lower price called the spot price, which varies over time with respect to the market or the internal state of the CSP. In this paper, we assume the spot price to be a function of the CSP's load. We introduce the concept of a parasite CSP, which rents spare resources from several CSPs simultaneously with spot prices and rents them to its customers with an on-demand price lower than the host CSPs' on-demand prices. We propose the overall architecture and interaction model of the parasite CSP. Mathematical analysis has been made to calculate the amount of spare resources of the host CSPs, the amount of resources that the parasite CSP can rent (its virtual capacity) as well as the probability of SLA violations. We evaluate our analysis over pricing data gathered from Amazon EC2 services. The results show that if the parasite CSP relies on several host CSPs, its virtual capacity can be considerable and the expected penalty due to SLA violation is acceptably low.

2.
PLoS One ; 12(8): e0183810, 2017.
Article in English | MEDLINE | ID: mdl-28846712

ABSTRACT

BACKGROUND: Understanding cancer development crossing several spatial-temporal scales is of great practical significance to better understand and treat cancers. It is difficult to tackle this challenge with pure biological means. Moreover, hybrid modeling techniques have been proposed that combine the advantages of the continuum and the discrete methods to model multiscale problems. METHODS: In light of these problems, we have proposed a new hybrid vascular model to facilitate the multiscale modeling and simulation of cancer development with respect to the agent-based, cellular automata and machine learning methods. The purpose of this simulation is to create a dataset that can be used for prediction of cell phenotypes. By using a proposed Q-learning based on SVR-NSGA-II method, the cells have the capability to predict their phenotypes autonomously that is, to act on its own without external direction in response to situations it encounters. RESULTS: Computational simulations of the model were performed in order to analyze its performance. The most striking feature of our results is that each cell can select its phenotype at each time step according to its condition. We provide evidence that the prediction of cell phenotypes is reliable. CONCLUSION: Our proposed model, which we term a hybrid multiscale modeling of cancer cell behavior, has the potential to combine the best features of both continuum and discrete models. The in silico results indicate that the 3D model can represent key features of cancer growth, angiogenesis, and its related micro-environment and show that the findings are in good agreement with biological tumor behavior. To the best of our knowledge, this paper is the first hybrid vascular multiscale modeling of cancer cell behavior that has the capability to predict cell phenotypes individually by a self-generated dataset.


Subject(s)
Models, Biological , Neoplasms/pathology , Apoptosis , Cell Hypoxia , Cell Movement , Cell Proliferation , Computer Simulation , ErbB Receptors/metabolism , Humans , Necrosis , Neoplasms/metabolism , Receptors, Tumor Necrosis Factor/metabolism , Signal Transduction , Tumor Necrosis Factor-alpha/metabolism , Vascular Endothelial Growth Factor A/metabolism
3.
Comput Methods Programs Biomed ; 136: 107-17, 2016 Nov.
Article in English | MEDLINE | ID: mdl-27686708

ABSTRACT

BACKGROUND AND OBJECTIVE: There are many cells with various phenotypic behaviors in cancer interacting with each other. For example, an apoptotic cell may induce apoptosis in adjacent cells. A living cell can also protect cells from undergoing apoptosis and necrosis. These survival and death signals are propagated through interaction pathways between adjacent cells called gap junctions. The function of these signals depends on the cellular context of the cell receiving them. For instance, a receiver cell experiencing a low level of oxygen may interpret a received survival signal as an apoptosis signal. In this study, we examine the effect of these signals on tumor growth. METHODS: We make an evolutionary game theory component in order to model the signal propagation through gap junctions. The game payoffs are defined as a function of cellular context. Then, the game theory component is integrated into an agent-based model of tumor growth. After that, the integrated model is applied to ductal carcinoma in situ, a type of early stage breast cancer. Different scenarios are explored to observe the impact of the gap junction communication and parameters of the game theory component on cancer progression. We compare these scenarios by using the Wilcoxon signed-rank test. RESULTS: The Wilcoxon signed-rank test succeeds in proving a significant difference between the tumor growth of the model before and after considering the gap junction communication. The Wilcoxon signed-rank test also proves that the tumor growth significantly depends on the oxygen threshold of turning survival signals into apoptosis. CONCLUSIONS: In this study, the gap junction communication is modeled by using evolutionary game theory to illustrate its role at early stage cancers such as ductal carcinoma in situ. This work indicates that the gap junction communication and the oxygen threshold of turning survival signals into apoptosis can notably affect cancer progression.


Subject(s)
Biological Evolution , Carcinoma, Ductal/pathology , Game Theory , Gap Junctions/physiology , Humans
4.
PLoS One ; 11(5): e0154508, 2016.
Article in English | MEDLINE | ID: mdl-27192547

ABSTRACT

Organizations are increasingly accepting data quality (DQ) as a major key to their success. In order to assess and improve DQ, methods have been devised. Many of these methods attempt to raise DQ by directly manipulating low quality data. Such methods operate reactively and are suitable for organizations with highly developed integrated systems. However, there is a lack of a proactive DQ method for businesses with weak IT infrastructure where data quality is largely affected by tasks that are performed by human agents. This study aims to develop and evaluate a new method for structured data, which is simple and practical so that it can easily be applied to real world situations. The new method detects the potentially risky tasks within a process, and adds new improving tasks to counter them. To achieve continuous improvement, an award system is also developed to help with the better selection of the proposed improving tasks. The task-based DQ method (TBDQ) is most appropriate for small and medium organizations, and simplicity in implementation is one of its most prominent features. TBDQ is case studied in an international trade company. The case study shows that TBDQ is effective in selecting optimal activities for DQ improvement in terms of cost and improvement.


Subject(s)
Data Accuracy , Quality Improvement , Total Quality Management/methods , Humans , Models, Theoretical , Program Evaluation , Social Planning
5.
PLoS One ; 10(5): e0127005, 2015.
Article in English | MEDLINE | ID: mdl-25993414

ABSTRACT

Knowledge architecture (KA) establishes the basic groundwork for the successful implementation of a short-term or long-term knowledge management (KM) program. An example of KA is the design of a prototype before a new vehicle is manufactured. Due to a transformation to large-scale organizations, the traditional architecture of organizations is undergoing fundamental changes. This paper explores the main strengths and weaknesses in the field of KA within large-scale organizations and provides a suitable methodology and supervising framework to overcome specific limitations. This objective was achieved by applying and updating the concepts from the Zachman information architectural framework and the information architectural methodology of enterprise architecture planning (EAP). The proposed solution may be beneficial for architects in knowledge-related areas to successfully accomplish KM within large-scale organizations. The research method is descriptive; its validity is confirmed by performing a case study and polling the opinions of KA experts.


Subject(s)
Knowledge , Organizations , Algorithms , Humans , Models, Theoretical
6.
Chaos ; 25(2): 023111, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25725647

ABSTRACT

Real networks show nontrivial topological properties such as community structure and long-tail degree distribution. Moreover, many network analysis applications are based on topological comparison of complex networks. Classification and clustering of networks, model selection, and anomaly detection are just some applications of network comparison. In these applications, an effective similarity metric is needed which, given two complex networks of possibly different sizes, evaluates the amount of similarity between the structural features of the two networks. Traditional graph comparison approaches, such as isomorphism-based methods, are not only too time consuming but also inappropriate to compare networks with different sizes. In this paper, we propose an intelligent method based on the genetic algorithms for integrating, selecting, and weighting the network features in order to develop an effective similarity measure for complex networks. The proposed similarity metric outperforms state of the art methods with respect to different evaluation criteria.

7.
Comput Methods Programs Biomed ; 111(1): 52-61, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23537611

ABSTRACT

Cardiovascular diseases are very common and are one of the main reasons of death. Being among the major types of these diseases, correct and in-time diagnosis of coronary artery disease (CAD) is very important. Angiography is the most accurate CAD diagnosis method; however, it has many side effects and is costly. Existing studies have used several features in collecting data from patients, while applying different data mining algorithms to achieve methods with high accuracy and less side effects and costs. In this paper, a dataset called Z-Alizadeh Sani with 303 patients and 54 features, is introduced which utilizes several effective features. Also, a feature creation method is proposed to enrich the dataset. Then Information Gain and confidence were used to determine the effectiveness of features on CAD. Typical Chest Pain, Region RWMA2, and age were the most effective ones besides the created features by means of Information Gain. Moreover Q Wave and ST Elevation had the highest confidence. Using data mining methods and the feature creation algorithm, 94.08% accuracy is achieved, which is higher than the known approaches in the literature.


Subject(s)
Coronary Artery Disease/diagnosis , Data Mining/methods , Diagnosis, Computer-Assisted/methods , Adult , Aged , Aged, 80 and over , Algorithms , Bayes Theorem , Databases, Factual/statistics & numerical data , Female , Humans , Male , Middle Aged , Neural Networks, Computer
8.
Res Cardiovasc Med ; 2(3): 133-9, 2013 Aug.
Article in English | MEDLINE | ID: mdl-25478509

ABSTRACT

BACKGROUND: Coronary artery disease (CAD) is the result of the accumulation of athermanous plaques within the walls of coronary arteries, which supply the myocardium with oxygen and nutrients. CAD leads to heart attacks or strokes and is, thus, one of the most important causes of death worldwide. Angiography, an imaging modality for blood vessels, is currently the most accurate method of diagnosing artery stenosis. However, the disadvantages of this method such as complications, costs, and possible side effects have prompted researchers to investigate alternative solutions. OBJECTIVES: The current study aimed to use data analysis, a non-invasive and less costly method, and various data mining algorithms to predict the stenosis of arteries. Among many people who refer to hospitals due to chest pain, a great number of them are normal and as such do not need angiography. The objective of this study was to predict patients who are most probably normal using features with the highest correlations with CAD with a view to obviate angiography costs and complications. Not a substitute for angiography, this method would select high-risk cases that definitely need angiography. PATIENTS AND METHODS: Different features were measured and collected from potential patients in order to construct a dataset, which was later utilized for model extraction. Most of the proposed methods in the literature have not considered the stenosis of each artery separately, whereas the present study employed laboratory and echocardiographic data to diagnose the stenosis of each artery separately. The data were gathered from 303 random visitors to Rajaie Cardiovascular, Medical and Research Center. Electrocardiographic (ECG) data were studied in our previous works. The goal of this study was, therefore, to seek the accuracy of echocardiographic and laboratory features to predict CAD patients that require angiography. RESULTS: Bagging and C4.5 classification algorithms were drawn upon to analyse the data, the former reaching accuracy rates of 79.54%, 61.46%, and 68.96% for the diagnosis of the stenoses of the left anterior descending (LAD), left circumflex (LCX), and right coronary artery (RCA), respectively. The accuracy to predict the LAD stenosis was attained via feature selection. In the current study, features effective in the stenosis of arteries were further determined, and some rules for the evaluation of triglyceride, hemoglobin, hypertension, dyslipidemia, diabetes mellitus, and ejection fraction were extracted. CONCLUSIONS: The current study presents the highest accuracy value to diagnose the LAD stenosis in the literature.

9.
Chaos ; 23(4): 043127, 2013 Dec.
Article in English | MEDLINE | ID: mdl-24387566

ABSTRACT

Real networks exhibit nontrivial topological features, such as heavy-tailed degree distribution, high clustering, and small-worldness. Researchers have developed several generative models for synthesizing artificial networks that are structurally similar to real networks. An important research problem is to identify the generative model that best fits to a target network. In this paper, we investigate this problem and our goal is to select the model that is able to generate graphs similar to a given network instance. By the means of generating synthetic networks with seven outstanding generative models, we have utilized machine learning methods to develop a decision tree for model selection. Our proposed method, which is named "Generative Model Selection for Complex Networks," outperforms existing methods with respect to accuracy, scalability, and size-independence.


Subject(s)
Artificial Intelligence , Models, Theoretical
10.
J Med Signals Sens ; 2(3): 153-9, 2012 Jul.
Article in English | MEDLINE | ID: mdl-23717807

ABSTRACT

Cardiovascular diseases are one of the most common diseases that cause a large number of deaths each year. Coronary Artery Disease (CAD) is the most common type of these diseases worldwide and is the main reason of heart attacks. Thus early diagnosis of CAD is very essential and is an important field of medical studies. Many methods are used to diagnose CAD so far. These methods reduce cost and deaths. But a few studies examined stenosis of each vessel separately. Determination of stenosed coronary artery when significant ECG abnormality exists is not a difficult task. Moreover, ECG abnormality is not common among CAD patients. The aim of this study is to find a way for specifying the lesioned vessel when there is not enough ECG changes and only based on risk factors, physical examination and Para clinic data. Therefore, a new data set was used which has no missing value and includes new and effective features like Function Class, Dyspnoea, Q Wave, ST Elevation, ST Depression and Tinversion. These data was collected from 303 random visitor of Tehran's Shaheed Rajaei Cardiovascular, Medical and Research Centre, in 2011 fall and 2012 winter. They processed with C4.5, Naïve Bayes, and k-nearest neighbour (KNN) algorithms and their accuracy were measured by tenfold cross validation. In the best method the accuracy of diagnosis of stenosis of each vessel reached to 74.20 ± 5.51% for Left Anterior Descending (LAD), 63.76 ± 9.73% for Left Circumflex and 68.33 ± 6.90% for Right Coronary Artery. The effective features of stenosis of each vessel were found too.

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