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1.
J Am Chem Soc ; 131(22): 7570-2, 2009 Jun 10.
Article in English | MEDLINE | ID: mdl-19445461

ABSTRACT

The relative stereochemistry of the major chlorosulfolipid of the chrysophyte alga Ochromonas danica, to which we have given the name "danicalipin A", is reported. The first synthesis of this lipid, via several stereospecific electrophilic additions to alkenes, serves to corroborate the stereochemical assignment made by NMR spectroscopy. The synthesis strategy described should be applicable to other chlorosulfolipids and should provide access to sufficient material for studies of the lipid's properties and function in membranes.


Subject(s)
Lipids/chemistry , Ochromonas/chemistry , Lipids/chemical synthesis , Molecular Conformation , Nuclear Magnetic Resonance, Biomolecular , Stereoisomerism
2.
Biochim Biophys Acta ; 1710(1): 57-62, 2005 Nov 15.
Article in English | MEDLINE | ID: mdl-16199002

ABSTRACT

Quinones (e.g., coenzyme Q, CoQ10) are best known as carriers of electrons and protons during oxidative phosphorylation and photosynthesis. A myriad of mostly more indirect physical methods, including fluorescence spectroscopy, electron-spin resonance, and nuclear magnetic resonance, has been used to localize CoQ10 within lipid membranes. They have yielded equivocal and sometimes contradictory results. Seeking unambiguous evidence for the localization of ubiquinone within lipid bilayers, we have employed neutron diffraction. CoQ10 was incorporated into stacked bilayers of perdeuterated dimyristoyl phosphatidyl choline doped with dimyristoyl phosphatidyl serine containing perdeuterated chains in the natural fluid-crystalline state. Our data show CoQ10 at the center of the hydrophobic core parallel to the membrane plane and not, as might be expected, parallel to the lipid chains. This localization is of importance for its function as a redox shuttle between the respiratory complexes and, taken together with our recent result that squalane is in the bilayer center, may be interpreted to show that all natural polyisoprene chains lie in the bilayer center. Thus ubiquinone, in addition to its free radical scavenging and its well-known role in oxidative phosphorylation as a carrier of electrons and protons, might also act as an inhibitor of transmembrane proton leaks.


Subject(s)
Lipid Bilayers/chemistry , Lipid Bilayers/metabolism , Ubiquinone/analogs & derivatives , Coenzymes , Neutron Diffraction , Ubiquinone/analysis , Ubiquinone/chemistry
3.
Biochim Biophys Acta ; 1556(2-3): 149-54, 2002 Dec 02.
Article in English | MEDLINE | ID: mdl-12460672

ABSTRACT

A recently proposed model for proton leakage across biological membranes [Prog. Lipid Res. 40 (2001) 299] suggested that hydrocarbons specifically in the center of the lipid bilayer inhibit proton leaks. Since cellular membranes maintain a proton electrochemical gradient as a principal energy transducer, proton leakage unproductively consumes cellular energy. Hydrocarbons in the bilayer are widespread in membranes that sustain such gradients. The alkaliphiles are unique in that they contain up to 40 mol% isoprenes in their membranes including 10-11 mol% squalene [J. Bacteriol. 168 (1986) 334]. Squalene is a polyisoprene hydrocarbon without polar groups. Localizing hydrocarbons in lipid bilayers has not been trivial. A myriad of physical methods including fluorescence spectroscopy, electron-spin resonance, nuclear magnetic resonance as well as X-ray and neutron diffraction have been used to explore this question with various degrees of success and often contradictory results. Seeking unambiguous evidence for the localization of squalene in membranes or lipid bilayers, we employed neutron diffraction. We incorporated 10 mol% perdeuterated or protonated squalane, an isosteric analogue of squalene, into stacked bilayers of dioleoyl phosphatidyl choline (DOPC) doped with dioleoyl phosphatidyl glycerol (DOPG) to simulate the negative charges found on natural membranes. The neutron diffraction data clearly show that the squalane lies predominantly in the bilayer center, parallel to the plane of the membrane.


Subject(s)
Lipid Bilayers/chemistry , Protons , Squalene/analogs & derivatives , Squalene/chemistry , Animals , Membrane Potentials/physiology , Models, Molecular , Molecular Structure , Neutron Diffraction , Permeability , Phosphatidylcholines/chemistry , Phosphatidylglycerols/chemistry
4.
FEBS Lett ; 528(1-3): 35-9, 2002 Sep 25.
Article in English | MEDLINE | ID: mdl-12297275

ABSTRACT

The role of specific lipid structures in biological membranes has been elusive. There are hundreds of them in nature. Why has nature made them? How do they aid in the functioning of membrane proteins? Genetics with its 'knock out' organisms declares that functions persist in the absence of any particular lipid. Nonetheless some lipids, such as cardiolipin (CL), are associated with particular functions in the cell. It may merely expand the variety of culture conditions (pH, temperature, etc.) under which the wild-type organism survives. This article explores a unique role of CL as a proton trap within membranes that conduct oxidative phosphorylation and therefore the synthesis of ATP. CL's pK(2) (above 8.0) provides a role for it as a headgroup proton trap for oxidative phosphorylation. It suggests why CL is found in membranes that pump protons. The high pK(2) also indicates that the headgroup has but one negative charge in the neutral pH range. Data on the binding of CL to all of the oxidative phosphorylation proteins suggest that the CL may aggregate the oxidative phosphorylation proteins into a patch while it restricts pumped protons within its headgroup domain - supplying protons to the ATP synthase with minimal changes in the bulk phase pH.


Subject(s)
Cardiolipins/metabolism , Cardiolipins/chemistry , Hydrogen-Ion Concentration , Lipid Bilayers/metabolism , Membranes/metabolism , Models, Biological , Oxidative Phosphorylation , Protein Binding , Proton Pumps/metabolism , Protons
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