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1.
Microbiologyopen ; 6(3)2017 06.
Article in English | MEDLINE | ID: mdl-28093882

ABSTRACT

Although it is well documented that the gut microbiota plays an important role in health and disease in mammalian species, this area has been poorly studied among carnivorous animals, especially within the mustelidae family. The gastrointestinal tract of carnivores is characterized by its short length and fast transit time, as compared to omnivores and herbivores, which is due to the low level of inherent fermentation. Mink represents an example of this, which have a GI tract only four times the length of the body and a transit time of approximately 4-5 hr. In this study, we used high-throughput 16S rRNA gene sequencing to explore the resident gut microbiota of the mink in terms of intra-and interindividual diversity. We report, for the first time, that the mucosa-associated bacterial community within the colon is diverse and dissimilar from the community found in the feed. We found large interindividual differences in bacterial composition between individual animals being dominated generally by the phylum Firmicutes, but in some cases also Proteobacteria or Fusobacteria. The bacterial load and community structure within the mucus was not severely impacted by 3 days of fasting, which implies that a resident and stable microbiota is hosted by these animals.


Subject(s)
Bacteria/classification , Bacteria/genetics , Colon/microbiology , Fasting , Gastrointestinal Microbiome , Intestinal Mucosa/microbiology , Mink , Animals , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , DNA, Ribosomal/chemistry , DNA, Ribosomal/genetics , High-Throughput Nucleotide Sequencing , Phylogeny , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA
2.
Acta Vet Scand ; 54: 70, 2012 Nov 26.
Article in English | MEDLINE | ID: mdl-23181342

ABSTRACT

BACKGROUND: Hemorrhagic pneumonia is a disease of farmed mink (Neovison vison) caused by Pseudomonas aeruginosa. The disease is highly seasonal in Danish mink with outbreaks occurring almost exclusively in the autumn. Human respiratory syncytial virus (RSV) has been shown to augment infection with P. aeruginosa in mice and to promote adhesion of P. aeruginosa to human respiratory cells. FINDINGS: We tested 50 lung specimens from mink with hemorrhagic pneumonia for bovine RSV by reverse transcriptase polymerase chain reaction (PCR) and for human RSV by a commercial real-time PCR. RSV was not found. CONCLUSIONS: This study indicates that human and bovine RSV is not a major co-factor for development of hemorrhagic pneumonia in Danish mink.


Subject(s)
Coinfection/veterinary , Lung/microbiology , Mink , Pneumonia/veterinary , Pseudomonas Infections/veterinary , Respiratory Syncytial Virus Infections/veterinary , Animal Husbandry , Animals , Coinfection/microbiology , Coinfection/virology , Denmark , Lung/virology , Pneumonia/microbiology , Pneumonia/virology , Pseudomonas Infections/microbiology , Pseudomonas aeruginosa/isolation & purification , RNA, Viral/genetics , RNA, Viral/metabolism , Real-Time Polymerase Chain Reaction/veterinary , Respiratory Syncytial Virus Infections/virology , Respiratory Syncytial Virus, Bovine/isolation & purification , Respiratory Syncytial Virus, Human/isolation & purification , Reverse Transcriptase Polymerase Chain Reaction/veterinary
3.
J Gen Virol ; 91(Pt 11): 2719-22, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20668117

ABSTRACT

The threat of emerging infectious viruses in humans requires a more effective approach regarding virus surveillance. A thorough understanding of virus diversity in wildlife provides epidemiological baseline information about pathogens and may lead to the identification of newly emerging pathogens in the future. In this study, diarrhoea samples from an outbreak of gastrointestinal illness in a Danish population of European roe deer were gathered for which no aetiological agent could be identified. Large-scale molecular RNA virus screening, based on host nucleic acid depletion, sequence-independent amplification and sequencing of partially purified viral RNA, revealed the presence of novel astroviruses, CcAstV-1 and CcAstV-2, in two of ten diarrhoea samples. Whether these viruses were responsible for causing diarrhoea remains to be determined. Phylogenetic analyses on amplified sequences showed that these viruses were most closely related to each other, were a novel species in the genus Mamastrovirus and may represent two different serotypes.


Subject(s)
Deer/virology , Diarrhea/veterinary , Gastroenteritis/veterinary , Mamastrovirus/classification , Mamastrovirus/isolation & purification , Animals , Cluster Analysis , Diarrhea/virology , Gastroenteritis/virology , Mamastrovirus/genetics , Molecular Sequence Data , Phylogeny , RNA, Viral/genetics , RNA, Viral/isolation & purification , Sequence Analysis, DNA , Sequence Homology
4.
Virus Res ; 144(1-2): 323-8, 2009 Sep.
Article in English | MEDLINE | ID: mdl-19416744

ABSTRACT

To investigate the possible origin and spread of the dramatic re-emergent 2002 distemper epizootic observed among seals in Danish Waters, we have sequenced wild-type genes of the attachment (H) glycoproteins of viruses from both the 2002 and 1988 epizootics. Phylogenetic analysis of the H genes of phocine distemper virus (PDV) together with other morbilliviruses, suggests that the re-emergent 2002 PDV is more closely related to a putative recent ancestral PDV than the 1988 PDV isolates. Moreover, upsurges of distemper disease in land-living carnivores linked in time and locality to the 2002 seal epizootic in Danish Waters was investigated and determined to be caused by canine distemper virus, the closest relative of PDV, revealing no direct epidemiological link to the seal epizootics.


Subject(s)
Distemper Virus, Phocine/classification , Distemper Virus, Phocine/genetics , Distemper/epidemiology , Genetic Variation , Viral Structural Proteins/genetics , Amino Acid Sequence , Animals , Cluster Analysis , Denmark/epidemiology , Distemper/virology , Distemper Virus, Phocine/isolation & purification , Molecular Sequence Data , Phoca , Phylogeny , Seals, Earless , Sequence Alignment , Sequence Analysis, DNA , Sequence Homology
5.
Virol J ; 4: 43, 2007 May 11.
Article in English | MEDLINE | ID: mdl-17498292

ABSTRACT

BACKGROUND: Since 2005 highly pathogenic (HP) avian influenza A H5N1 viruses have spread from Asia to Africa and Europe infecting poultry, humans and wild birds. HP H5N1 virus was isolated in Denmark for the first time in March 2006. A total of 44 wild birds were found positive for the HP H5N1 infection. In addition, one case was reported in a backyard poultry flock. RESULTS: Full-genome characterisation of nine isolates revealed that the Danish H5N1 viruses were highly similar to German H5N1 isolates in all genes from the same time period. The haemagglutinin gene grouped phylogenetically in H5 clade 2 subclade 2 and closest relatives besides the German isolates were isolates from Croatia in 2005, Nigeria and Niger in 2006 and isolates from Astrakhan in Russia 2006. The German and Danish isolates shared unique substitutions in the NA, PB1 and NS2 proteins. CONCLUSION: The first case of HP H5N1 infection of wild and domestic birds in Denmark was experienced in March 2006. This is the first full genome characterisation of HP H5N1 avian influenza A virus in the Nordic countries. The Danish viruses from this time period have their origin from the wild bird strains from Qinghai in 2005. These viruses may have been introduced to the Northern Europe through unusual migration due to the cold weather in Eastern Europe at that time.


Subject(s)
Animals, Wild/virology , Birds/virology , Influenza A Virus, H5N1 Subtype/isolation & purification , Influenza in Birds/virology , Poultry/virology , Amino Acid Substitution , Animals , Base Sequence , Denmark , Genome, Viral , Influenza A Virus, H5N1 Subtype/classification , Influenza A Virus, H5N1 Subtype/genetics , Influenza A Virus, H5N1 Subtype/pathogenicity , Molecular Sequence Data , Phylogeny , RNA, Viral/genetics , Sequence Analysis , Sequence Homology
6.
Am J Pathol ; 170(4): 1362-9, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17392174

ABSTRACT

Angiogenesis is known to play a major role in neoplasia, including hematolymphoid neoplasia. We assessed the relationships among angiogenesis and expression of vascular endothelial growth factor and its receptors in the context of clinically and biologically relevant subtypes of diffuse large B-cell lymphoma using immunohistochemical evaluation of tissue microarrays. We found that diffuse large B-cell lymphoma specimens showing higher local vascular endothelial growth factor expression showed correspondingly higher microvessel density, implying that lymphoma cells induce local tumor angiogenesis. In addition, local vascular endothelial growth factor expression was higher in those specimens showing higher expression of the receptors of the growth factor, suggesting an autocrine growth-promoting feedback loop. The germinal center-like and nongerminal center-like subtypes of diffuse large B-cell lymphoma were biologically and prognostically distinct. Interestingly, only in the more clinically aggressive nongerminal center-like subtype were microvessel densities significantly higher in specimens showing higher vascular endothelial growth factor expression; the same was true for the finding of higher vascular endothelial growth factor receptor-1 expression in conjunction with higher vascular endothelial growth factor expression. These differences may have important implications for the responsiveness of the two diffuse large B-cell lymphoma subtypes to anti-vascular endothelial growth factor and anti-angiogenic therapies.


Subject(s)
Blood Vessels/pathology , Lymphoma, B-Cell/pathology , Lymphoma, Large B-Cell, Diffuse/pathology , Vascular Endothelial Growth Factor A/biosynthesis , Vascular Endothelial Growth Factor Receptor-1/biosynthesis , Vascular Endothelial Growth Factor Receptor-2/biosynthesis , Blood Vessels/metabolism , Cluster Analysis , Humans , Immunohistochemistry , Lymphoma, B-Cell/metabolism , Lymphoma, Large B-Cell, Diffuse/metabolism , Neovascularization, Pathologic/metabolism , Neovascularization, Pathologic/pathology , Tissue Array Analysis
7.
Haematologica ; 92(2): 176-83, 2007 Feb.
Article in English | MEDLINE | ID: mdl-17296566

ABSTRACT

BACKGROUND AND OBJECTIVES: VICKZ family members are RNA-binding regulatory proteins expressed during embryogenesis but not usually found in normal adult tissue. The presence of VICKZ in normal germinal centers (GC) prompted us to characterize the expression pattern of this protein in lymphoid and hematopoietic tissues. DESIGN AND METHODS: We generated a pan-VICKZ antibody that recognized all three isoforms of VICKZ protein and screened 889 patients' samples by immunohistologic methods. We also analyzed the expression of VICKZ in normal hematopoiesis tissue by staining samples of tonsils, lymph nodes RESULTS: VICKZ protein expression was documented for the first time in normal human GC and in follicular (126/165), mediastinal large B-cell (9/10), Burkitt (2/2), diffuse large B-cell (DLBCL, 155/200), lymphocyte-predominant Hodgkin's (12/13), classical Hodgkin's (101/108), and anaplastic large cell (6/8) lymphomas and in lymphoid and myeloid leukemias. Since DLBCL may derive from GC or non-GC B cells we performed hierarchical cluster analysis for VICKZ, HGAL, BCL6, CD10, MUM1/IRF4 and BCL2 which showed that VICKZ is expressed in both subtypes. In addition, VICKZ mRNA isoforms were differentially expressed in lymphoma subtypes and over 40% of DLBCL expressed hVICKZ2, an isoform not usually present in normal GC B cells. INTERPRETATION AND CONCLUSIONS: We show that in normal lymphoid tissues VICKZ is expressed in GC lymphocytes but in lymphoid neoplasms its expression is not limited to GC-derived lymphoma subtypes. However, VICKZ exhibits differential expression in lymphoma subtypes and thus may be a marker of potential value in the diagnosis and study of hematopoietic neoplasia. The aberrant expression of its isoforms in DLBCL raises the possibility that these isoforms may be associated with different functions and suggests that further study of their role in normal and neoplastic lymphoid cells is warranted.


Subject(s)
Gene Expression Regulation, Neoplastic , Hematologic Neoplasms/metabolism , Hematopoietic Stem Cells/metabolism , Lymphoma, Large B-Cell, Diffuse/metabolism , RNA-Binding Proteins/biosynthesis , 3T3 Cells , Animals , Cell Line, Tumor , HL-60 Cells , HeLa Cells , Humans , Jurkat Cells , K562 Cells , Mice , Oligonucleotide Array Sequence Analysis , RNA-Binding Proteins/physiology
8.
Blood ; 109(4): 1636-42, 2007 Feb 15.
Article in English | MEDLINE | ID: mdl-17038524

ABSTRACT

We previously developed a multivariate model based on the RNA expression of 6 genes (LMO2, BCL6, FN1, CCND2, SCYA3, and BCL2) that predicts survival in diffuse large B-cell lymphoma (DLBCL) patients. Since LMO2 emerged as the strongest predictor of superior outcome, we generated a monoclonal anti-LMO2 antibody in order to study its tissue expression pattern. Immunohistologic analysis of over 1200 normal and neoplastic tissue and cell lines showed that LMO2 protein is expressed as a nuclear marker in normal germinal-center (GC) B cells and GC-derived B-cell lines and in a subset of GC-derived B-cell lymphomas. LMO2 was also expressed in erythroid and myeloid precursors and in megakaryocytes and also in lymphoblastic and acute myeloid leukemias. It was rarely expressed in mature T, natural killer (NK), and plasma cell neoplasms and was absent from nonhematolymphoid tissues except for endothelial cells. Hierarchical cluster analysis of immunohistologic data in DLBCL demonstrated that the expression profile of the LMO2 protein was similar to that of other GC-associated proteins (HGAL, BCL6, and CD10) but different from that of non-GC proteins (MUM1/IRF4 and BCL2). Our results warrant inclusion of LMO2 in multivariate analyses to construct a clinically applicable immunohistologic algorithm for predicting survival in patients with DLBCL.


Subject(s)
B-Lymphocytes/chemistry , DNA-Binding Proteins/analysis , Germinal Center , Lymphoma, B-Cell/chemistry , Metalloproteins/analysis , Adaptor Proteins, Signal Transducing , Cell Line , Cluster Analysis , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Humans , Immunohistochemistry , LIM Domain Proteins , Lymphoma, Large B-Cell, Diffuse , Prognosis , Proto-Oncogene Proteins/analysis , Tissue Distribution , Tumor Cells, Cultured
9.
J Wildl Dis ; 41(4): 834-8, 2005 Oct.
Article in English | MEDLINE | ID: mdl-16456180

ABSTRACT

We identified a malignant lymphoma infiltrating the lung, liver, kidney, mesenteric lymph nodes, and eye as the cause of death in a male West Indian manatee (Trichechus manatus). Diagnosis was based on gross, histopathologic, and immunohistochemical studies. Tissue samples from ten organs were included in a tissue microarray and sections from this array were subjected to immunohistochemical staining. The cytoplasm of the neoplastic lymphocytes identified in six organs was positive for CD3, a marker for T-cell differentiation. The neoplastic cells were negative for CD79alpha, a marker for B-cell differentiation. The cause of this neoplasm was not determined. This is the first report of malignant lymphoma in the mammal order Sirenia.


Subject(s)
Lymphoma/veterinary , Trichechus manatus , Animals , Fatal Outcome , Immunohistochemistry/veterinary , Lymphoma/diagnosis , Lymphoma/epidemiology , Lymphoma/pathology , Male , Organ Specificity
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