Aminopyrazine CB1 receptor inverse agonists.

A series of 5,6-diaryl-2-amino-pyrazines were prepared and found to have antagonist-like properties at the CB1 receptor. Subsequent SAR studies optimized both receptor potency and drug-like properties including solubility and Cytochrome-P450 inhibition potential. Optimized compounds were demonstrated to be inverse agonists and compared in vivo with rimonabant for their ability to inhibit food intake, to occupy central CB1 receptors and to influence hormonal markers associated with obesity.

Strategies and tactics for optimizing the Hit-to-Lead process and beyond--a computational chemistry perspective.

The Hit-to-Lead-to-Candidate process continues to evolve rapidly, and while technological advances offer much potential, the reality often pales to the promise. Conversely, strategies and tactics implementing existing technologies may result in more benefit in the end. This article focuses on some of the thinking and approaches that may improve the efficiency and effectiveness of the beginnings of the drug discovery path. From the perspective of computational chemists, different types of strategy and philosophy of approach will be treated including: considerations of early lead choices, strategies for improving poor leads, multivariate optimization, opportunities for informatics, and engineering good decisions.

NMR chemical shifts. Substituted acetylenes.

The MPW1PW91/6-311+G(2d,p) and MP2/6-311+G(2d,p) GIAO nuclear shieldings for a series of monosubstituted acetylenes have been calculated using the MP2/6-311G(2d,p) geometries. Axially symmetric substituents such as fluorine may lead to large changes in the isotropic shielding but have little effect on the tensor component (zz) about the C[triple bond]C bond axis. On the other hand, substituents such as vinyl and aldehyde groups lead to essentially no difference in the isotropic shielding but are calculated to give a large zz paramagnetic shift to the terminal carbon of the acetylene group, without having much effect on the inner carbon. The tensor components of the chemical shifts for trimethylsilylacetylene, methoxyacetylene, and propiolaldehyde have been measured and are in reasonable agreement with the calculations. The downfield shift at the terminal carbon of propiolaldehyde along with a small upfield shift at the adjacent carbon has been found to result from the coupling of the in-plane pi MO of the acetylene with the pi* orbital that has a node near the central carbon. The tensor components for acetonitrile also have been measured, and the shielding of cyano and acetylenic carbons are compared.

Design, synthesis, and discovery of 5-piperazinyl-1,2,6,7-tetrahydro-5H-azepino[3,2,1-hi]indol-4-one derivatives: a novel series of mixed dopamine D2/D4 receptor antagonist.

5-piperazinyl-1,2,6,7-tetrahydro-5H-azepino[3,2,1-hi]indol-4-one derivatives were designed, synthesized, and identified as a new series of mixed dopamine D(2)/D(4) receptor antagonists. This series featured a rigid tricyclic ring system as an important pharmacophore core structure for high binding affinity. Molecular modeling studies are also described.

The impact of informatics and computational chemistry on synthesis and screening.

High-throughput synthesis and screening technologies have enhanced the impact of computational chemistry on the drug discovery process. From the design of targeted, drug-like libraries to 'virtual' optimization of potency, selectivity and ADME/Tox properties, computational chemists are able to efficiently manage costly resources and dramatically shorten drug discovery cycle times. This review will describe some of the successful strategies and applications of state-of-the-art algorithms to enhance drug discovery, as well as key points in the drug discovery process where computational methods can have, and have had, greatest impact.

Conformational Studies in the Cyclohexane Series. 1. Experimental and Computational Investigation of Methyl, Ethyl, Isopropyl, and tert-Butylcyclohexanes.

The conformational enthalpy (DeltaH degrees ), entropy (DeltaS degrees ), and free energy (-DeltaG degrees ) of methyl- (1), ethyl- (2), and isopropylcyclohexane (3) have been reinvestigated both experimentally and computationally. A novel experimental approach to evaluation of highly biased conformational equilibria is described that obviates the need to measure large axial/equatorial isomer ratios directly in order to determine the equilibrium constant: the natural abundance (13)C signal for the C(2,6) resonance in the equatorial isomer of an alkylcyclohexane may be used as an internal reference, and the ratio of this band area to that of an enriched (13)C nucleus in the axial isomer gives K following correction for statistical differences and the differing (13)C-content of the signals being monitored. The experimental conformational enthalpies (DeltaH degrees ), determined at 157 K in independent studies at two laboratories, were found to be (kcal/mol) 1.76 +/- 0.10 (Me), 1.54 +/- 0.12 (Et), and 1.40 +/- 0.15 (i-Pr); the corresponding conformational entropies (DeltaS degrees, eu) were 0.2 +/- 0.2 (Me), 1.3 +/- 0.8 (Et), and 3.5 +/- 0.9 (i-Pr). Computational studies at the QCISD level gave satisfactory agreement with the experimental results, but B3LYP gave energy differences that were too large, whereas MP2 gave differences that were too small. The computed structural data indicates that an axial alkyl substituent leads to local flattening of the cyclohexane ring but there was no evidence of a 1,3-synaxial interaction with the axial hydrogens at C(3,5).