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1.
Zookeys ; 1192: 179-196, 2024.
Article in English | MEDLINE | ID: mdl-38425442

ABSTRACT

A new feather mite species, Mycterialgesboycianaesp. nov. (Xolalgidae), was identified from the Oriental Stork, Ciconiaboyciana Swinhoe, 1873, in Korea. Males of M.boycianaesp. nov. are distinguished from Mycterialgesmesomorphus Gaud & Atyeo, 1981, in having a single triangular prodorsal shield, sinuous margins of the opisthosoma located between setae e2 and h2 on the hysteronotal shield, an oval-shaped epiandrum without posterior extensions, a shorter tibia + tarsus IV than femoragenu IV, and an absent ambulacral disc of leg IV. Females differ in having a prodorsal shield with a posterior margin that is blunt-angular, and a concave posterior margin of the hysteronotal shield with posterior extensions. This study presents the first record of the feather mite genus Mycterialges in birds of the genus Ciconia (Ciconiidae). Additionally, we determined the phylogenetic relationship among Ingrassiinae using the mitochondrial cytochrome c oxidase subunit (COI).

2.
Zookeys ; 1088: 81-97, 2022.
Article in English | MEDLINE | ID: mdl-35437373

ABSTRACT

Two new species of feather mites are described from two individuals of the black-tailed godwit, Limosalimosa (Linnaeus, 1758), in Korea: Alloptes (Conuralloptes) neolimosaesp. nov. (Analgoidea, Alloptidae) and Phyllochaetalimosae sp. nov. (Pterolichoidea, Syringobiidae). Males of A. (C.) neolimosaesp. nov. are distinguished from A. (C.) limosae in having the hysteronotal shield with a straight anterior margin, setae h2 enlarged and slightly flattened in the basal half, and the terminal lamella monotonously transparent without sclerotized patches; females differ in having legs IV with ambulacral discs extending to or slightly beyond the level of setae f2. The discovery of P.limosae sp. nov. represents the first record of the feather mite genus Phyllochaeta on godwits of the genus Limosa Brisson, 1760 (Scolopacidae, Limosinae). Males of P.limosae sp. nov. are distinguished from P.secunda in having the terminal cleft semi-ovoid with a length-to-width ratio of 1.7, and the terminal membranes with 15 or 16 finger-shaped denticles; females differ in having the hysteronotal shield bearing faint longitudinal striations in the posterior third and lacking lacunae, and setae c1 situated posterior to the level of setae c2. Additionally, we obtained partial sequences of the mitochondrial cytochrome c oxidase subunit I (COI) gene from A. (C.) neolimosaesp. nov. and estimated genetic distances from 10 other Alloptes species based on comparisons of COI sequences.

3.
Mitochondrial DNA B Resour ; 7(3): 571-572, 2022.
Article in English | MEDLINE | ID: mdl-35386958

ABSTRACT

In this study, the complete mitochondrial genome of Neckeropsis nitidula (Mitt.) M. Fleisch. in the family Neckeraceae was determined. This mitogenome was 104,716 base pairs in length and contained 40 protein-coding genes, three ribosomal RNA genes, and 24 transfer RNA genes. The overall nucleotide composition was asymmetric (29.5% A, 29.3% T, 21.3% G, and 19.9% C), with a 41.2% G + C content. The gene arrangement was identical to that of most Hypnales genomes. A phylogenetic tree was constructed using the N. nitidula mitogenome obtained in this study and the complete mitochondrial genome sequences of 23 bryophytes and 3 Marchantiophyta that were publicly available in GenBank. Our phylogenetic analysis revealed that N. nitidula was clustered in a clade with other Hypnalean taxa.

4.
Korean J Parasitol ; 59(5): 537-542, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34724776

ABSTRACT

This study intended to record a species of feather mite, Neopteronyssus bilineatus Mironov, 2003, (Arachnida: Pteronyssidae), from a grey-capped pygmy woodpecker, Yungipicus canicapillus (Blyth, 1845), in the Republic of Korea. Mite samples were collected from the flight feathers of a woodpecker, preserved directly in 95% ethyl alcohol, and then observed by a light microscope after specimen preparation. Morphology of Neopteronyssus bilineatus is distinguished from other pici group species by opisthosoma part with 2 longitudinal bends, tarsal seta rIII 3 times longer than tarsus III in males, and 2 elongated hysteronotal plates extending beyond the level of setae e2 in females. In the present study, a species of feather mite, N. bilineatus, was newly recorded from Y. canicapillus in Korean fauna.


Subject(s)
Birds/parasitology , Mite Infestations , Mites , Animals , Female , Male , Microscopy , Mite Infestations/veterinary , Republic of Korea
5.
Zookeys ; 1061: 109-130, 2021.
Article in English | MEDLINE | ID: mdl-34707455

ABSTRACT

We report on the first investigation of feather mites associated with birds living on the Barton Peninsula (King George Island, Antarctica). We found seven feather mite species of the superfamily Analgoidea from four host species. Two new species are described from two charadriiform hosts: Alloptes (Sternalloptes) antarcticussp. nov. (Alloptidae) from Stercorariusmaccormicki Saunders (Stercorariidae), and Ingrassiachionis sp. nov. (Xolalgidae) from Chionisalbus (Gmelin) (Chionidae). Additionally, we provide partial sequences of the mitochondrial cytochrome c oxidase subunit I (COI), which was utilized as a DNA barcode, for all seven feather mite species.

6.
Mitochondrial DNA B Resour ; 6(7): 1893-1894, 2021 Jun 14.
Article in English | MEDLINE | ID: mdl-34179468

ABSTRACT

The mitogenome of Myuroclada maximowiczii (GenBank accession number MT834960) has a total length of 104,216 bp and encodes 40 protein-coding genes, three ribosomal RNAs, and 24 transfer RNAs. The overall nucleotide composition is asymmetric (29.6% A, 29.4% T, 21.2% G, and 19.8% C), with AT content (59.0%) higher than GC content (41.0%). The gene arrangement of this mitogenome is identical to that in other bryophytes. Phylogenetic trees were constructed using complete mitochondrial genome sequences of 24 bryophytes publicly available in GenBank and the mitogenome sequence derived in this study. Our phylogenetic analysis revealed that M. maximowiczii clustered in a clade with other hypnalean taxas.

7.
Mitochondrial DNA B Resour ; 6(3): 1247-1248, 2021 Mar 28.
Article in English | MEDLINE | ID: mdl-33829097

ABSTRACT

The present study reports the complete mitochondrial genome of Myurella julacea (Schwägr.) Schimp. (GenBank accession number MT850126); the genome size was 104,979 bp. The gene arrangement was found to be similar to that in other bryophytes, and the genome consisted of 40 protein-coding genes (PCGs), 3 ribosomal RNAs (rRNAs), and 24 transfer RNAs (tRNAs). The phylogenic relationship was analyzed by construction of a phylogenetic tree based on the mitogenome of M. julacea and 25 other bryophytes publicly available in GenBank. The complete mitogenome of M. julacea is expected to provide insights into the evolution of species belonging to the order Hypnales.

8.
Mitochondrial DNA B Resour ; 5(1): 1071-1072, 2020 Feb 07.
Article in English | MEDLINE | ID: mdl-33366879

ABSTRACT

The complete mitochondrial genome of Climacium dendroides (GenBank accession number MN942036 was 104,860 base pairs in length, containing 40 protein-coding genes, 3 ribosomal RNA (rRNA), and 24 transfer RNA (tRNA). The base composition was 29.6% A, 29.4% T, 21.0% G, and 19.8% C and its G + C content was 41.0%. The mitochondrial structure and gene order was similar to other Bryophytes. Phylogenetic tree based on the combined analysis of 33 protein-coding genes was well congruent with traditional species relationship of the moss order Hypnales.

9.
Mitochondrial DNA B Resour ; 5(2): 1200-1201, 2020.
Article in English | MEDLINE | ID: mdl-33366911

ABSTRACT

The complete chloroplast (cp) genome sequence of Climacium dendroides, determined using Illumina sequencing data, is presented herein. The DNA sequence of C. dendroides is 124,957 bp in length and has an overall CG content of 29.0%, including 82 protein-coding genes, 36 transfer RNA genes, and 8 ribosomal RNA genes. Phylogenetic trees were constructed based on the cp genome sequences of 10 bryophytes downloaded from GenBank and one acquired from this study.

10.
Sci Rep ; 10(1): 7417, 2020 May 04.
Article in English | MEDLINE | ID: mdl-32366978

ABSTRACT

We have studied the phase singularity of relativistic vortex beams for two sets of relativistic operators using circulation. One set includes new spin and orbital angular momentum (OAM) operators, which are derived from the parity-extended Poincaré group, and the other set consists of the (usual) Dirac spin and OAM operators. The first set predicts the same singularity in the circulation as in the case of nonrelativistic vortex beams. On the other hand, the second set anticipates that the singularity of the circulation is spin-orientation-dependent and can disappear, especially for a relativistic paraxial electron beam with spin parallel to the propagating direction. These contradistinctive predictions suggest that a relativistic electron beam experiment with spin-polarized electrons could for the first time answer a long-standing fundamental question, i.e., what are the proper relativistic observables, raised from the beginning of relativistic quantum mechanics following the discovery of the Dirac equation.

11.
Mitochondrial DNA B Resour ; 5(3): 3443-3444, 2020 Oct 05.
Article in English | MEDLINE | ID: mdl-33458198

ABSTRACT

The complete chloroplast (cp) genome sequence of Myuroclada maximowiczii (GenBank accession number MT726030), a species of moss in the Brachytheciaceae family, was determined using Illumina HiSeq paired-end sequencing data. The total size of the cp genome was 124,607 bp. The genome contained a large single-copy (LSC) region of 86,684 bp, a small single-copy (SSC) region of 18,483 bp, and a pair of identical inverted repeat regions (IRs) of 9,720 bp. The genome contained 82 protein-coding genes, 36 transfer RNA (tRNA) genes, and eight ribosomal RNA (rRNA) genes. The cp genome presented here will provide useful information for future phylogenetic and evolutionary studies of Myuroclada species.

12.
Mitochondrial DNA B Resour ; 5(3): 3505-3506, 2020 Oct 07.
Article in English | MEDLINE | ID: mdl-33458220

ABSTRACT

Here, we report the complete chloroplast (cp) genome of the moss Myurella julacea (Schwägr.) Schimp. We found that the total length of the M. julacea complete cp genome was 124,457 base pairs (bp) long, comprising 82 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. The genome had a typical quadripartite structure, and consisted of a large single-copy region (LSC) of 86,607 bp, a small single-copy region (SSC) of 18,508 bp, and a pair of inverted repeats with a length of 9671 bp each. The base composition of the cp DNA was 26.0% A, 29.4% T, 24.5% C, and 20.1% G with an overall GC content of 44.6%. Phylogenetic analysis revealed that M. julacea clustered into a clade with other Hypnales groups with high bootstrap support. The complete cp genome presented here will provide useful information for phylogenetic and evolutionary studies of endangered Bryophyte species.

13.
Mitochondrial DNA B Resour ; 2(1): 41-42, 2017 Feb 16.
Article in English | MEDLINE | ID: mdl-33473710

ABSTRACT

In this study, we determined the mitogenome sequence of Ardeacarus ardeae (Canestrini, 1878) in the family Pterolichidae (Acari, Sarcoptiformes), which is the first complete mitogenome sequence in feather mite. The mitogenome of A. ardeae is 14,069 bp in length and contains 13 protein-coding genes (PCGs), 22 transfer RNAs (tRNAs), 2 ribosomal RNAs (rRNAs), and a control region (CR). The phylogenetic tree shows that A. ardeae belong to the supercohort Desmonomatides within the order Sarcoptiformes.

14.
Sci Rep ; 6: 22986, 2016 Mar 14.
Article in English | MEDLINE | ID: mdl-26971717

ABSTRACT

Quantum theory has nonlocal correlations, which bothered Einstein, but found to satisfy relativistic causality. Correlation for a shared quantum state manifests itself, in the standard quantum framework, by joint probability distributions that can be obtained by applying state reduction and probability assignment that is called Born rule. Quantum correlations, which show nonlocality when the shared state has an entanglement, can be changed if we apply different probability assignment rule. As a result, the amount of nonlocality in quantum correlation will be changed. The issue is whether the change of the rule of quantum probability assignment breaks relativistic causality. We have shown that Born rule on quantum measurement is derived by requiring relativistic causality condition. This shows how the relativistic causality limits the upper bound of quantum nonlocality through quantum probability assignment.

15.
Anim Cogn ; 19(4): 861-5, 2016 07.
Article in English | MEDLINE | ID: mdl-26939544

ABSTRACT

Recent findings report that wild animals can recognize individual humans. To explain how the animals distinguish humans, two hypotheses are proposed. The high cognitive abilities hypothesis implies that pre-existing high intelligence enabled animals to acquire such abilities. The pre-exposure to stimuli hypothesis suggests that frequent encounters with humans promote the acquisition of discriminatory abilities in these species. Here, we examine individual human recognition abilities in a wild Antarctic species, the brown skua (Stercorarius antarcticus), which lives away from typical human settlements and was only recently exposed to humans due to activities at Antarctic stations. We found that, as nest visits were repeated, the skua parents responded at further distances and were more likely to attack the nest intruder. Also, we demonstrated that seven out of seven breeding pairs of skuas selectively responded to a human nest intruder with aggression and ignored a neutral human who had not previously approached the nest. The results indicate that Antarctic skuas, a species that typically inhabited in human-free areas, are able to recognize individual humans who disturbed their nests. Our findings generally support the high cognitive abilities hypothesis, but this ability can be acquired during a relatively short period in the life of an individual as a result of interactions between individual birds and humans.


Subject(s)
Charadriiformes , Nesting Behavior , Recognition, Psychology , Visual Perception , Aggression , Animals , Animals, Wild , Antarctic Regions , Birds , Female , Humans , Male
16.
Mitochondrial DNA A DNA Mapp Seq Anal ; 27(3): 1783-4, 2016 05.
Article in English | MEDLINE | ID: mdl-25268998

ABSTRACT

The South Polar Skua, gull-like seabirds is the most fascinating Antarctic seabirds that lay two eggs at sites free of snow and ice and predominantly hunt pelagic fish and penguins. Blood samples of the South Polar Skua Stercorarius maccormicki was collected during the summer activity near King Sejong station in Antarctica. The complete mitochondrial DNA sequence of S. maccormicki was 16,669 bp, showing conserved genome structure and orientation found in other avian species. The control region of S. maccormicki was 93- and 80 bp shorter compared to those of Chroicocephalus saundersi and Synthliboramphus antiquus respectively. Interestingly, there is a (CAACAAACAA)6 repeat sequence in the control region. Our results of S. maccormicki mt genome including the repeat sequence, may provide useful genetic information for phylogenetic and phylogeographic histories of the southern skua complex.


Subject(s)
Charadriiformes/genetics , Genome, Mitochondrial/genetics , Animals , Antarctic Regions , Charadriiformes/classification , DNA, Mitochondrial/genetics , Phylogeny
17.
Phys Rev Lett ; 107(17): 170403, 2011 Oct 21.
Article in English | MEDLINE | ID: mdl-22107490

ABSTRACT

We provide a general framework of utilizing the no-signaling principle in derivation of the guessing probability in the minimum-error quantum state discrimination. We show that, remarkably, the guessing probability can be determined by the no-signaling principle. This is shown by proving that, in the semidefinite programing for the discrimination, the optimality condition corresponds to the constraint that quantum theory cannot be used for a superluminal communication. Finally, a general bound to the guessing probability is presented in a closed form.

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