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1.
Genes (Basel) ; 13(6)2022 06 08.
Article in English | MEDLINE | ID: mdl-35741794

ABSTRACT

A new Populus variety with a strong salt tolerance was obtained from cross breeding P. talassica as the female parent and P. euphratica as the male parent. In order to elucidate the molecular mechanism and find out the major differentially expressed genes of salt tolerance of P. talassica × P. euphratica, after being subjected to salt stress, at 0, 200, and 400 mmol/L NaCl, the root, stem, and leaf transcriptomes (denoted as R0, S0, and L0; R200, S200, and L200; and R400, S400, and L400, respectively) of P. talassica × P. euphratica were sequenced. In total, 41,617 differentially expressed genes (DEGs) were identified in all the comparison groups with 21,603 differentially upregulated genes and 20,014 differentially downregulated genes. Gene Ontology analysis showed that DEGs were significantly enriched in biological processes that may be involved in salt stress, such as 'cell communication', 'ion transport', 'signaling', and signal 'transmission'. Kyoto Encyclopedia of Genes and Genomes analysis showed that DEGs were mainly enriched in pathways of 'plant-pathogen interaction', 'carbon metabolism', and 'plant hormone signal transmission'. The pathways and related gene information formed a basis for future research on the mechanisms of salt stress, the development of molecular markers, and the cloning of key genes in P. talassica × P. euphratica.


Subject(s)
Populus , Plant Breeding , Populus/metabolism , Salt Tolerance/genetics , Stress, Physiological/genetics , Transcriptome/genetics
2.
Sci Rep ; 10(1): 15148, 2020 09 16.
Article in English | MEDLINE | ID: mdl-32939003

ABSTRACT

Suaeda rigida is a lignified, true haplotype that predominantly grows in the Tarim basin, China. It has significant economic and ecological value. Herein, with aim to determine the genes associated with salt tolerance, transcriptome sequencing was performed on its stem, leaves and root over three set NaCl gradients regimens at treatment intervals of 3 h and 5 days. From our findings, we identified 829,095 unigenes, with 331,394 being successfully matched to at least one annotation database. In roots, under 3 h treatment, no up-regulated DEGs were identified in 100 and 500 mM NaCl treated samples. Under 5 days treatment, 97, 60 and 242 up-regulated DEGs were identified in 100, 300, 500 mM NaCl treated samples, respectively. We identified 50, 22 and 255 down-regulated DEGs in 100, 300, 500 mM NaCl treated samples, respectively. GO biological process enrichment analysis established that down-regulated DEGs were associated with nitrogen compound transport, organic substance transport and intracellular protein transport while the up-regulated genes were enriched in cell wall biogenesis, such as plant-type cell wall biogenesis, cell wall assembly, extracellular matrix organization and plant-type cell wall organization. These findings provide valuable knowledge on genes associated with salt tolerance of Suaeda rigida, and can be applied in other downstream haplotype studies.


Subject(s)
Salt Stress/genetics , Salt-Tolerant Plants/genetics , Chenopodiaceae , Gene Expression Profiling , Gene Expression Regulation, Plant , Genes, Plant , Plant Roots/genetics , Plant Roots/metabolism , RNA-Seq , Salinity , Salt-Tolerant Plants/metabolism , Sodium Chloride/metabolism
3.
Ying Yong Sheng Tai Xue Bao ; 27(2): 403-11, 2016 Feb.
Article in Chinese | MEDLINE | ID: mdl-27396111

ABSTRACT

Spatial distribution pattern of Populus euphratica and P. pruinosa clonal ramets at three sites was studied, including natural mixed forest of P. euphratica and P. pruinosa in Awati County located in the downstream of Yarkant River, natural P. pruinosa forest in Group 16 of Nongyishi in the Tarim River upstream area, and natural P. euphratica forest in Luntai County located in the middle reach of the Tarim River. The clonal ramets of the three sites showed a cluster distribution pattern at eight sampling scales, i.e., 5 mx5 m, 5 mx10 m, 5 mx15 m, 10 mx10 m, 10 mx15 m, 15 mx15 m, 15 mx20 m, and 20 mX20 m. This pattern revealed that the cluster distribution was a basic property in the spatial distribution pattern of P. euphratica and P. pruinosa populations. At 5 mx5 m scale, negative binomial parameter was minimum, while Cassie index, patchiness inex and aggregation strength were maximum for the two ramet populations at the three sites.


Subject(s)
Forests , Populus/growth & development , China , Spatial Analysis
4.
Ying Yong Sheng Tai Xue Bao ; 20(11): 2671-7, 2009 Nov.
Article in Chinese | MEDLINE | ID: mdl-20135999

ABSTRACT

With the high-yielding winter wheat cultivar Jimai 22 as test material, a field experiment was conducted in Yanzhou of Shandong to examine the effects of regulated deficit irrigation on the water consumption and water use efficiency (WUE) of the cultivar. Five treatments were installed, i.e., the soil relative moisture content at sowing, jointing, and anthesis stages being 80%, 65% and 65% (W0), 80%, 70% and 70% (W1), 80%, 80% and 80% (W2), 90%, 80% and 80% (W3), and 90%, 85% and 85% (W4), respectively. Under the condition of 228 mm precipitation in growth season, the total water consumption was higher in treatments W1 and W4 than in treatments W0, W2, and W3, and no difference was observed between treatments W1 and W4. Comparing with W4, treatment W1 decreased the water storage in 0-200 cm soil layer and the water consumption by wheat from jointing to anthesis stages, but increased the water consumption from anthesis to maturity stages. The water consumption rates at the stages from jointing to anthesis and from anthesis to maturity in treatment W4 were higher. Under regulated deficit irrigation, treatment W0 had higher WUE, but the grain yield was the lowest. The WUE in other treatments increased first, and then decreased with increasing irrigation amount. Both the water consumption and the grain yield were the highest in treatments W1 and W4, and treatment W1 had higher irrigation water use efficiency and irrigation benefit than treatment W4, being the best irrigation regime of high-yielding and water-saving in our study.


Subject(s)
Agricultural Irrigation , Agriculture/methods , Soil/analysis , Triticum/growth & development , Water/metabolism , Biomass , China , Seasons , Triticum/metabolism , Water/pharmacology
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