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1.
Chem Commun (Camb) ; 58(44): 6377-6380, 2022 May 30.
Article in English | MEDLINE | ID: mdl-35593073

ABSTRACT

Breath odor sensing-based individual authentication was conducted for the first time using an artificial olfactory sensor system. Using a 16-channel chemiresistive sensor array and machine learning, a mean accuracy of >97% was successfully achieved. The impact of the number of sensors on the accuracy and reproducibility was also demonstrated.


Subject(s)
Machine Learning , Odorants , Reproducibility of Results
2.
Chem Commun (Camb) ; 58(44): 6465, 2022 May 30.
Article in English | MEDLINE | ID: mdl-35593413

ABSTRACT

Correction for 'Breath odor-based individual authentication by an artificial olfactory sensor system and machine learning' by Chaiyanut Jirayupat et al., Chem. Commun., 2022, DOI: https://doi.org/10.1039/D1CC06384G.

3.
ACS Sens ; 7(2): 534-544, 2022 02 25.
Article in English | MEDLINE | ID: mdl-35072452

ABSTRACT

Humidity and moisture effects, frequently called water poisoning, in surroundings are inevitable for various molecular sensing devices, strongly affecting their sensing characteristics. Here, we demonstrate a water-selective nanostructured dehumidifier composed of ZnO/TiO2/CaCl2 core-shell heterostructured nanowires for molecular sensing spaces. The fabricated nanostructured dehumidifier is highly water-selective without detrimental adsorptions of various volatile organic compound molecules and can be repeatedly operated. The thermally controllable and reversible dehydration process of CaCl2·nH2O thin nanolayers on hydrophilic ZnO/TiO2 nanowire surfaces plays a vital role in such water-selective and repeatable dehumidifying operations. Furthermore, the limitation of detection for sensing acetone and nonanal molecules in the presence of moisture (relative humidity ∼ 90%) was improved more than 20 times using nanocomposite sensors by operating the developed nanostructured dehumidifier. Thus, the proposed water-selective nanostructured dehumidifier offers a rational strategy and platform to overcome water poisoning issues for various molecular and gas sensors.


Subject(s)
Nanowires , Zinc Oxide , Calcium Chloride , Humidity , Water
4.
ACS Sens ; 7(1): 151-158, 2022 01 28.
Article in English | MEDLINE | ID: mdl-34788009

ABSTRACT

Polymer-carbon nanocomposite sensor is a promising molecular sensing device for electronic nose (e-nose) due to its printability, variety of polymer materials, and low operation temperature; however, the lack of stability in an air environment has been an inevitable issue. Here, we demonstrate a design concept for realizing long-term stability in a polyethylene glycol (PEG)-carbon black (CB) nanocomposite sensor by understanding the underlying phenomena that cause sensor degradation. Comparison of the sensing properties and infrared spectroscopy on the same device revealed that the oxidation-induced consumption of PEG is a crucial factor for the sensor degradation. According to the mechanism, we introduced an antioxidizing agent (i.e., ascorbic acid) into the PEG-CB nanocomposite sensor to suppress the PEG oxidation and successfully demonstrated the long-term stability of sensing properties under an air environment for 30 days, which had been difficult in conventional polymer-carbon nanocomposite sensors.


Subject(s)
Nanocomposites , Polyethylene Glycols , Carbon/chemistry , Nanocomposites/chemistry , Polyethylene Glycols/chemistry , Polymers/chemistry , Soot
5.
Biosci Biotechnol Biochem ; 76(4): 679-84, 2012.
Article in English | MEDLINE | ID: mdl-22484930

ABSTRACT

Lung cancer is a leading cause of deaths in cancer. Hence, developing early-stage diagnostic tests that are non-invasive, highly sensitive, and specific is crucial. In this study, we investigated to determine whether biomarkers derived from urinary volatile organic compounds (VOCs) can be used to discriminate between lung cancer patients and normal control patients. The VOCs were extracted from the headspace by solid-phase microextraction and were analyzed by gas chromatography time-of-flight mass spectrometry. Nine putative volatile biomarkers were identified as elevated in the lung cancer group. Receiver operating characteristic curve analysis was also performed, and the markers were found to be highly sensitive and specific. Next we used principal component analysis (PCA) modeling to make comparisons compare within the lung cancer group, and found that 2-pentanone may have utility in differentiating between adenocarcinoma and squamous cell carcinomas.


Subject(s)
Adenocarcinoma/diagnosis , Biomarkers, Tumor/urine , Carcinoma, Squamous Cell/diagnosis , Lung Neoplasms/diagnosis , Pentanones/urine , Volatile Organic Compounds/urine , Adenocarcinoma/pathology , Adenocarcinoma/urine , Adenocarcinoma of Lung , Adult , Aged , Carcinoma, Squamous Cell/pathology , Carcinoma, Squamous Cell/urine , Chromatography, Gas , Diagnosis, Differential , Female , Humans , Lung/metabolism , Lung/pathology , Lung Neoplasms/pathology , Lung Neoplasms/urine , Male , Middle Aged , Principal Component Analysis , ROC Curve , Solid Phase Microextraction , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
6.
Cancer Cell Int ; 12(1): 7, 2012 Feb 24.
Article in English | MEDLINE | ID: mdl-22364569

ABSTRACT

BACKGROUNDS: A potential strategy for the diagnosis of lung cancer is to exploit the distinct metabolic signature of this disease by way of biomarkers found in different sample types. In this study, we investigated whether specific volatile organic compounds (VOCs) could be detected in the culture medium of the lung cancer cell line A549 in addition to the urine of mice implanted with A549 cells. RESULTS: Several VOCs were found at significantly increased or decreased concentrations in the headspace of the A549 cell culture medium as compared with the culture medium of two normal lung cell lines. We also analyzed the urine of mice implanted with A549 cells and several VOCs were also found to be significantly increased or decreased relative to urine obtained from control mice. It was also revealed that seven VOCs were found at increased concentrations in both sample types. These compounds were found to be dimethyl succinate, 2-pentanone, phenol, 2-methylpyrazine, 2-hexanone, 2-butanone and acetophenone. CONCLUSIONS: Both sample types produce distinct biomarker profiles, and VOCs have potential to distinguish between true- and false-positive screens for lung cancer.

7.
Rapid Commun Mass Spectrom ; 25(9): 1130-40, 2011 May 15.
Article in English | MEDLINE | ID: mdl-21488112

ABSTRACT

An improved method of de novo peptide sequencing based on mass spectrometry using novel N-terminal derivatization reagents with high proton affinity has been developed. The introduction of a positively charged group into the N-terminal amino group of a peptide is known to enhance the relative intensity of b-ions in product ion spectra, allowing the easy interpretation of the spectra. However, the physicochemical properties of charge derivatization reagents required for efficient fragmentation remain unclear. In this study, we prepared several derivatization reagents with high proton affinity, which are thought to be appropriate for peptide fragmentation under low-energy collision-induced dissociation (CID) conditions, and examined their usefulness in de novo peptide sequencing. Comparison of the effects on fragmentation among three derivatization reagents having a guanidino or an amidino moiety, which differ in proton affinity, clearly indicated that there was an optimal proton affinity for efficient fragmentation of peptides. Among reagents tested in this study, derivatization with 4-amidinobenzoic acid brought about the most effective fragmentation. This derivatization approach will offer a novel de novo peptide sequencing method under low-energy CID conditions.


Subject(s)
Peptide Fragments/chemistry , Sequence Analysis, Protein/methods , Amino Acid Sequence , Amino Acids, Basic/chemistry , Benzoates/chemistry , Glycolates/chemistry , Guanidines/chemistry , Hydrogen-Ion Concentration , Mass Spectrometry , Niacin/chemistry
8.
Biosci Biotechnol Biochem ; 74(2): 364-9, 2010.
Article in English | MEDLINE | ID: mdl-20139620

ABSTRACT

Scorpion venoms are composed of a number of peptides, many of which show neurotoxicity. In addition to these neurotoxins, several antimicrobial peptides have also been isolated from the venoms. The scorpion Isometrus maculatus, belonging to the Buthidae family, is found in many tropical regions including Japan, but little attention has been paid to its biological activity and chemical composition. In this study, we isolated a novel insect toxin, Im-1, by bioassay-guided fractionation of the venom of I. maculatus. Rapid and reversible paralysis was observed after injection of Im-1 into crickets. Im-1 consists of 56 amino acids, and is predicted to form an amphipathic alpha-helix. Since Im-1 shares sequence similarity to an antimicrobial peptide, parabutoporin, we evaluated its effects on several bacterial strains and found that it showed an antimicrobial activity profile similar to parabutoporin. This suggests that Im-1 and parabutoporin exert their antimicrobial effects through similar mechanisms.


Subject(s)
Anti-Infective Agents/toxicity , Insecta/metabolism , Peptides/toxicity , Scorpion Venoms/toxicity , Scorpions/chemistry , Amino Acid Sequence , Amino Acids/genetics , Animals , Insecta/genetics , Molecular Sequence Data , Neurotoxins/toxicity , Peptides/chemistry , Protein Structure, Secondary/genetics , Scorpion Venoms/chemistry , Sequence Homology, Amino Acid
9.
Mol Genet Genomics ; 280(6): 509-19, 2008 Dec.
Article in English | MEDLINE | ID: mdl-18818952

ABSTRACT

Gametophytic self-incompatibility (GSI) in the grasses is controlled by a distinct two-locus genetic system governed by the multiallelic loci S and Z. We have employed diploid Hordeum bulbosum as a model species for identifying the self-incompatibility (SI) genes and for elucidating the molecular mechanisms of the two-locus SI system in the grasses. In this study, we attempted to identify S haplotype-specific cDNAs expressed in pistils and anthers at the flowering stage in H. bulbosum, using the AFLP-based mRNA fingerprinting (AMF, also called cDNA-AFLP) technique. We used the AMF-derived DNA clones as markers for fine mapping of the S locus, and found that the locus resided in a chromosomal region displaying remarkable suppression of recombination, encompassing a large physical region. Furthermore, we identified three AMF-derived markers displaying complete linkage to the S locus, although they showed no significant homology with genes of known functions. Two of these markers showed expression patterns that were specific to the reproductive organs (pistil or anther), suggesting that they could be potential candidates for the S gene.


Subject(s)
Agriculture , Genes, Plant , Hordeum/genetics , Amplified Fragment Length Polymorphism Analysis , Gene Expression Regulation, Plant , Genetic Linkage , Genetic Markers , Haplotypes , Molecular Sequence Data , Physical Chromosome Mapping , Plant Proteins/genetics , Plant Proteins/metabolism , RNA, Messenger/genetics , RNA, Messenger/metabolism , Recombination, Genetic/genetics
10.
Toxicon ; 50(3): 428-37, 2007 Sep 01.
Article in English | MEDLINE | ID: mdl-17559900

ABSTRACT

Scorpion venoms are composed of a number of neurotoxic peptides. A variety of toxins have been isolated from the venoms of scorpions of the family Buthidae, however, little interest has been paid to non-Buthidae scorpions. In this study, we examined the toxicity of the venom of Liocheles australasiae (Hemiscorpiidae) to mice and crickets, and characterized the peptide components by HPLC and mass spectrometry. Over 200 components were detected in the L. australasiae venom by LC/MS analysis, with components of molecular masses ranging from 500 to 5000 Da being particularly abundant. A number of peptides contained two to four disulfide bridges, which was estimated based on the mass difference after derivatization of Cys residues. A peptide having a monoisotopic molecular mass of 7781.6 Da and four disulfide bridges was isolated from the venom. The peptide has a primary structure similar in terms of the position of eight Cys residues to those observed in several peptides found from scorpions, ticks and insects, although biological roles of these peptides are unknown.


Subject(s)
Peptides/chemistry , Scorpion Venoms/chemistry , Scorpion Venoms/toxicity , Amino Acid Sequence , Animals , Gryllidae/drug effects , Molecular Sequence Data , Peptides/metabolism , Scorpion Venoms/metabolism , Scorpions/metabolism
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