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1.
Appl Environ Microbiol ; 76(3): 810-9, 2010 Feb.
Article in English | MEDLINE | ID: mdl-19948849

ABSTRACT

This work investigated biostimulation and bioaugmentation as strategies for removing polyurethane (PU) waste in soil. Soil microcosms were biostimulated with the PU dispersion agent "Impranil" and/or yeast extract or were bioaugmented with PU-degrading fungi, and the degradation of subsequently buried PU was determined. Fungal communities in the soil and colonizing buried PU were enumerated on solid media and were analyzed using denaturing gradient gel electrophoresis (DGGE). Biostimulation with yeast extract alone or in conjunction with Impranil increased PU degradation 62% compared to the degradation in untreated control soil and was associated with a 45% increase in putative PU degraders colonizing PU. Specific fungi were enriched in soil following biostimulation; however, few of these fungi colonized the surface of buried PU. Fungi used for soil bioaugmentation were cultivated on the surface of sterile wheat to form a mycelium-rich inoculum. Wheat, when added alone to soil, increased PU degradation by 28%, suggesting that wheat biomass had a biostimulating effect. Addition of wheat colonized with Nectria haematococca, Penicillium viridicatum, Penicillium ochrochloron, or an unidentified Mucormycotina sp. increased PU degradation a further 30 to 70%, suggesting that biostimulation and bioaugmentation were operating in concert to enhance PU degradation. Interestingly, few of the inoculated fungi could be detected by DGGE in the soil or on the surface of the PU 4 weeks after inoculation. Bioaugmentation did, however, increase the numbers of indigenous PU-degrading fungi and caused an inoculum-dependent change in the composition of the native fungal populations, which may explain the increased degradation observed. These results demonstrate that both biostimulation and bioaugmentation may be viable tools for the remediation of environments contaminated with polyurethane waste.


Subject(s)
Fungi/metabolism , Polyurethanes/metabolism , Soil Microbiology , Soil Pollutants/metabolism , 2,4-Dichlorophenoxyacetic Acid/metabolism , Biodegradation, Environmental , Bioreactors , Colony Count, Microbial , Culture Media/metabolism , DNA, Fungal/analysis , DNA, Fungal/metabolism , DNA, Ribosomal/metabolism , Ecosystem , Electrophoresis , Electrophoresis, Polyacrylamide Gel , Environmental Monitoring , Environmental Pollutants/metabolism , Fungi/physiology , Nucleic Acid Amplification Techniques , Penicillium/metabolism , RNA, Ribosomal, 18S/metabolism , Triticum/metabolism , Waste Disposal, Fluid
2.
J Appl Microbiol ; 101(2): 319-30, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16882139

ABSTRACT

AIM: To investigate the effect of starvation, surface attachment and growth in a biofilm on the susceptibility of Aureobasidium pullulans to the biocides 2-n-octyl-4-isothiazolin-3-one (OIT) and sodium hypochlorite (NaOCl). METHODS AND RESULTS: Fluorescence loss from a green fluorescent protein (GFP)-transformed strain was used to monitor real-time loss in viability as previously described in situ in 96-well plates. Exponential phase, yeast-like (YL) cells were settled in the bottom of the wells as a low-density monolayer (LDM) and were susceptible to all biocide concentrations (25-100 mug ml(-1)). The exponential phase YL cells were either starved for 48 h in suspension or starved for 48 h as LDMs in the wells. Starvation in both cases led to a small reduction in susceptibility to the biocides. In contrast, 48-h biofilms grown in malt extract broth showed an apparent lack of susceptibility to 25 and 50 mug ml(-1) OIT and to 25-100 mug ml(-1) NaOCl. However, when the OIT concentration was increased to compensate for the higher cell density in the biofilm, the biofilms were found to be equally susceptible to the LDM. CONCLUSIONS: Starvation of A. pullulans YL cells either in suspension or as attached LDM resulted in a decrease in susceptibility to low concentrations of both OIT and NaOCl while the apparent reduced susceptibility of mature biofilms was due to the increase in biofilm cell density rather than true biofilm resistance per se. SIGNIFICANCE AND IMPACT OF THE STUDY: Monitoring fluorescence loss from the GFP-transformed strain of A. pullulans can be used as a fast and reliable method for monitoring cell death in real time as a response to biocide and antimicrobial challenge.


Subject(s)
Disinfectants/pharmacology , Yeasts/physiology , Biodegradation, Environmental , Biofilms , Colony-Forming Units Assay , Green Fluorescent Proteins/analysis , Microbiological Techniques , Microscopy, Fluorescence , Sodium Hypochlorite/pharmacology , Starvation , Thiazoles/pharmacology , Yeasts/drug effects
3.
Microbiology (Reading) ; 152(Pt 6): 1731-1739, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16735736

ABSTRACT

Plasticized polyvinyl chloride (pPVC) with or without incorporated biocides was buried in grassland and forest soil for up to 10 months. The change with time in viable counts of fungi on the plastic surface was followed, together with the percentage capable of clearing the two plasticizers dioctyl adipate (DOA) and dioctyl phthalate (DOP). With time fungal total viable counts (TVC) on control pPVC increased and the fraction able to clear DOA was considerably higher than the average estimated in both soil types. A total of 92 fungal morphotypes were isolated from grassland soil and 42 from forest soil with the greatest variety of fungal isolates observed on control pPVC. The incorporation of biocides into pPVC affected both fungal TVC and the richness of species isolated. The biocides NCMP [n-(trichloromethylthio)phthalimide], OBPA (10,10'-oxybisphenoxarsine) and OIT (2-n-octyl-4-isothiazolin-3-one) were the most effective in grassland soil, and TCMP [2,3,5,6-tetrachloro-4-(methylsulphonyl)pyridine] and NCMP the most effective in forest soil. In grassland soil, Penicillium janthinellum established as a principal colonizer and was recovered from all pPVC types. DOP clearers were found at much lower levels than DOA clearers, with Doratomyces spp. being the most efficient. At the end of 10 months the physical properties of the pPVC were altered; changes in stiffness were the most significant for heavily colonized grassland-buried pPVC samples, whereas in forest soil, the extensibility of the pPVC was affected more than the stiffness. These results suggest that fungi are important colonizers of pPVC buried in soil and that enrichment of soil fungi capable of clearing DOA occurs during colonization of the plastic surface. The results also demonstrate that incorporated biocides have a marked impact on the richness of species colonizing the pPVC surface.


Subject(s)
Antifungal Agents/pharmacology , Fungi/drug effects , Fungi/growth & development , Plasticizers , Polyvinyl Chloride , Adipates/chemistry , Arsenicals/pharmacology , Colony Count, Microbial , DNA, Fungal/analysis , Diethylhexyl Phthalate/chemistry , Fungi/classification , Fungi/isolation & purification , Molecular Sequence Data , Phthalimides/pharmacology , Plasticizers/chemistry , Poaceae , Polyvinyl Chloride/chemistry , Sequence Analysis, DNA , Soil , Soil Microbiology , Thiazoles/pharmacology , Trees
4.
Oral Microbiol Immunol ; 20(3): 131-40, 2005 Jun.
Article in English | MEDLINE | ID: mdl-15836513

ABSTRACT

The surface of the oral plaque bacterium Streptococcus cristatus is decorated with a lateral tuft of fibrils. The fibrillar tuft functions in the adhesion of S. cristatus to heterologous bacterial species in the plaque biofilm. The tuft typically consists of a densely packed fringe of shorter fibrils 238 +/- 19 nm long with longer, less abundant fibrils 403 +/- 66 nm long projecting through the fringe of short fibrils. The two types of fibrils in the tufts of S. cristatus have been refractory to biochemical separation, complicating their characterization. A hexadecane partition assay was used to enrich for subpopulations of S. cristatus CR311 (type strain NCTC 12479) having distinct fibrillar morphotypes. Negative staining in the TEM revealed that cells of a hydrophobic subpopulation of S. cristatus (CR311var1) carried only the long fibrils (395 +/- 32 nm). A hydrophilic subpopulation of S. cristatus (CR311var3) consisted of mixed morphotypes having no fibrils or remnant short fibrils (223 +/- 49 nm). No long fibrils were observed on any cells in the CR311var3 subpopulation. The CR311var3 morphotype, unlike the wild-type strain and CR311var1, was not able to form corncobs with either Corynebacterium matruchotii or Fusobacterium nucleatum. Variant CR311var3 did not express the novel gene srpA, which encodes a high molecular weight (321,882 Da) serine-rich protein, SrpA. The SrpA protein contains two extensive repeat motifs of 17 and 71 amino acids and a gram-positive cell wall anchor consensus sequence (LPNTG). The unusual properties of SrpA most closely resemble those of Fap1, the fimbrial-associated adhesin protein of Streptococcus parasanguis. The association of long fibrils, high surface hydrophobicity, ability to form corncob formations, and expression of the srpA gene suggest that SrpA is a long fibril protein in S. cristatus.


Subject(s)
Bacterial Proteins/genetics , Fimbriae, Bacterial/genetics , Streptococcus/genetics , Amino Acid Sequence , Bacterial Adhesion/genetics , Bacterial Adhesion/physiology , Bacterial Proteins/metabolism , Biofilms , Chromosome Mapping , Dental Plaque/microbiology , Dental Plaque/ultrastructure , Fimbriae, Bacterial/ultrastructure , Humans , Molecular Sequence Data , Serine/chemistry , Species Specificity , Streptococcus/physiology , Streptococcus/ultrastructure
5.
Int J Syst Evol Microbiol ; 55(Pt 2): 821-829, 2005 Mar.
Article in English | MEDLINE | ID: mdl-15774669

ABSTRACT

A Gram-negative bacterium was isolated from a freshwater biofilm developed on a stainless steel surface under a fluid velocity of 0.26 m s(-1). The strain, MBRG1.5(T), was cultivated on R2A agar and formed pink colonies. Light microscopy and negative staining in a transmission electron microscope showed that the cells were rod-shaped, approximately 2.8-4.1 microm long by 0.9-1.7 microm wide in size and produced large quantities of extracellular fibrillar material. Additionally, following growth in batch culture, transmission electron microscopy showed that many cells plasmolysed. Stationary-phase cells were more variable in size and shape. The DNA G+C content was 40.0 mol%. The most abundant fatty acids were 15 : 0 iso (22.5 %), followed by 16 : 1omega5c (16.9 %) and 15 : 0 iso 2-OH (16.5 %). Phylogenetic analysis of the 16S rRNA gene showed that the strain was a member of the family 'Flexibacteraceae' of the Cytophaga-Flavobacterium-Bacteroides group. Phenotypic and genotypic analyses indicated that the strain could not be assigned to any recognized genus; therefore a novel genus and species, Adhaeribacter aquaticus gen. nov., sp. nov., is proposed, with MBRG1.5(T) (=DSM 16391(T)=NCIMB 14008(T)) as the type strain.


Subject(s)
Biofilms/growth & development , Cytophagaceae/classification , Drinking , Fresh Water/microbiology , Base Composition , Cytophagaceae/genetics , Cytophagaceae/growth & development , Cytophagaceae/isolation & purification , DNA, Bacterial/analysis , DNA, Ribosomal/analysis , Fatty Acids/analysis , Genes, rRNA , Genotype , Molecular Sequence Data , Phenotype , RNA, Ribosomal, 16S/genetics , Sequence Analysis, DNA
6.
J Appl Microbiol ; 97(6): 1132-9, 2004.
Article in English | MEDLINE | ID: mdl-15546403

ABSTRACT

AIMS: To develop a real-time in situ method to quantify loss of viability of Aureobasidium pullulans PRAFS8 cells attached to plasticized polyvinyl chloride (pPVC) with incorporated biocides, and to use the method to compare biocide efficacy in situ. METHODS AND RESULTS: A. pullulans PRAFS8, transformed with green fluorescent protein (GFP), was used to quantify the efficacy of a range of biocides incorporated into pPVC. Experimentally, it was found that a density of 1.53 x 10(6) yeast cells per cm(2) of pPVC was optimal as increasing the density of the yeast cells to 6.12 x 10(6) cm(-2) attached to pPVC containing the biocide 2-n-octyl-4-isothiazolin-3-one (OIT) decreased the rate of fluorescence loss. A strong positive correlation between fluorescence and viable yeast cell number was observed and fluorescence was used as a direct indicator of cell viability. The effectiveness of five commercial biocides, commonly incorporated into pPVC at their in-use concentrations, was tested against yeast cells attached to the pPVC surface. The loss of fluorescence and hence viability in situ was quantified using image analysis. The biocides N-(trichloromethylthio) phthalimide (NCMP), 10,10'-oxybisphenoxarsine (OBPA), OIT and 2,3,5,6-tetrachloro-4-(methylsulphonyl) pyridine (TCMP) caused complete loss of fluorescence within 30-50 h. In contrast the biocide dichloro-octyl-isothiazoline caused only 55 +/- 15% fluorescence loss after 50 h. Starvation of the yeast cells in suspension for 24 h prior to attachment reduced their initial sensitivity to OBPA, NCMP, OIT and TCMP by 15-20%, but eventually the fluorescence was also completely lost. CONCLUSIONS: The use of A. pullulans expressing cytosolic GFP enables the in situ quantification of loss of viability when cells are attached to pPVC with incorporated biocides. SIGNIFICANCE AND IMPACT OF THE STUDY: GFP fluorescence was used as a real-time indicator of cell viability and thus can be applied for direct quantification of the effectiveness of a broad range of biocides, incorporated into the polymer mass and used to protect a variety of plastics or other materials from microbial growth.


Subject(s)
Antifungal Agents/pharmacology , Ascomycota/drug effects , Green Fluorescent Proteins/analysis , Arsenicals/pharmacology , Cell Survival , Colony Count, Microbial , Fluorescence , Microbial Sensitivity Tests , Phthalimides/pharmacology , Polyvinyl Chloride , Pyridines/pharmacology , Sulfones/pharmacology , Thiazoles/pharmacology
7.
J Appl Microbiol ; 96(6): 1367-73, 2004.
Article in English | MEDLINE | ID: mdl-15139931

ABSTRACT

AIM: To characterize the expression of coaggregation between Blastomonas natatoria 2.1 and Micrococcus luteus 2.13 following growth in liquid culture, on agar and in an artificial biofilm matrix composed of poloxamer hydrogel. METHODS AND RESULTS: The ability of B. natatoria 2.1 and M. luteus 2.13 to coaggregate with one another was assessed following growth in liquid culture as colonies on agar or within a poloxamer hydrogel matrix. In all these environments a cycle of gain and loss of coaggregation occurred when the two cell types were aged simultaneously, with optimum expression occurring in early stationary phase. Blastomonas natatoria 2.1 cells only coaggregated maximally after entry into stationary phase. Conversely, M. luteus 2.13 cells only coaggregated in exponential phase and early stationary phase and coaggregation ability was lost in late stationary phase. Maximal coaggregation therefore only occurred between the two strains if both were in early stationary phase, when the surface properties of the two cell types were optimal for coaggregation. CONCLUSION: In addition to occurring between cells grown in liquid culture, coaggregation between aquatic bacteria occurs after growth as a biofilm on agar and in an artificial biofilm matrix in poloxamer. Under all conditions, the B. natatoria 2.1 coaggregation adhesin and complementary receptor on M. luteus 2.13 were only expressed simultaneously during early stationary phase.


Subject(s)
Biofilms , Fresh Water/microbiology , Gram-Negative Aerobic Bacteria/physiology , Micrococcus luteus/physiology , Water Microbiology , Agar , Bacterial Adhesion , Culture Media , Gram-Negative Aerobic Bacteria/growth & development , Micrococcus luteus/growth & development , Poloxamer
8.
J Appl Microbiol ; 95(1): 78-85, 2003.
Article in English | MEDLINE | ID: mdl-12807456

ABSTRACT

AIMS: To investigate the relationship between soil water holding capacity (WHC) and biodegradation of polyester polyurethane (PU) and to quantify and identify the predominant degrading micro-organisms in the biofilms on plastic buried in soil. METHODS AND RESULTS: High numbers of both fungi and bacteria were recovered from biofilms on soil-buried dumb-bell-shaped pieces of polyester PU after 44 days at 15-100% WHC. The tensile strength of the polyester PU was reduced by up to 60% over 20-80% soil WHC, but no reduction occurred at 15, 90 or 100% soil WHC. A PU agar clearance assay indicated that fungi, but not bacteria were, the major degrading organisms in the biofilms on polyester PU and 10-30% of all the isolated fungi were able to degrade polyester PU in this assay. A 5.8S rDNA sequencing identified 13 strains of fungi representing the three major colony morphology types responsible for PU degradation. Sequence homology matches identified these strains as Nectria gliocladioides (five strains), Penicillium ochrochloron (one strain) and Geomyces pannorum (seven strains). Geomyces pannorum was the predominant organism in the biofilms comprising 22-100% of the viable polyester PU degrading fungi. CONCLUSIONS: Polyester PU degradation was optimum under a wide range of soil WHC and the predominant degrading organisms were fungi. SIGNIFICANCE AND IMPACT OF THE STUDY: By identifying the predominant degrading fungi in soil and studying the optimum WHC conditions for degradation of PU it allows us to better understand how plastics are broken down in the environment such as in landfill sites.


Subject(s)
Fungi/physiology , Polyesters , Polyurethanes , Soil Microbiology , Water , Biodegradation, Environmental , Biofilms , Culture Media , DNA, Fungal/analysis , Microscopy, Electron , Penicillium/physiology , Sequence Homology, Nucleic Acid , Tensile Strength
9.
Oral Microbiol Immunol ; 18(2): 114-20, 2003 Apr.
Article in English | MEDLINE | ID: mdl-12654102

ABSTRACT

The prevalence of Csh-like fibrillar surface proteins among oral streptococci was investigated by ELISA and by immunoelectron microscopy using antiserum raised to recombinant fragments of CshA of Streptococcus gordonii DL1. The majority of S. gordonii, Streptococcus sanguis and Streptococcus oralis strains tested elaborated short (ca. 50-80 nm long) surface fibrils and reacted with antiserum to the amino acid repeat region of CshA, demonstrating the widespread nature of Csh-like proteins among these species. In contrast, reactivity with antiserum raised to the adhesion-mediating non-repetitive region of CshA was more restricted. On the basis of the ELISA results, several isolates were selected for immunogold analysis using CshA antisera. Immunogold-negative staining showed a surface distribution of 10 nm gold particles consistent with antibody binding to short fibrils. Long fibrils (>150 nm long), where present, were not significantly labelled with gold. The results suggest that some of the short peritrichous fibrils on many mitis group streptococci comprise Csh-like fibrillar protein. Further, the data are consistent with our hypothesis that the antigenically conserved amino acid repeat region of Csh-like proteins forms a scaffold for cell-distal presentation of the amino-terminal non-repetitive region that, at least in S. gordonii DL1, functions as an adhesin.


Subject(s)
Bacterial Proteins/analysis , Membrane Proteins/analysis , Streptococcus/chemistry , Adhesins, Bacterial/analysis , Antigenic Variation , Bacterial Proteins/ultrastructure , Conserved Sequence , Humans , Immunohistochemistry , Membrane Proteins/ultrastructure , Microscopy, Electron , Repetitive Sequences, Nucleic Acid , Sequence Analysis, Protein , Streptococcus/classification , Streptococcus oralis/chemistry , Streptococcus sanguis/chemistry , Streptococcus sanguis/classification
10.
FEMS Microbiol Lett ; 220(1): 133-40, 2003 Mar 14.
Article in English | MEDLINE | ID: mdl-12644239

ABSTRACT

The coaggregation ability of bacteria isolated from a freshwater biofilm was compared to those derived from the coexisting planktonic population. Twenty-nine morphologically distinct bacterial strains were isolated from a 6-month-old biofilm, established in a glass tank under high-shear conditions, and 15 distinct strains were isolated from the associated re-circulating water. All 44 strains were identified to genus or species level by 16S rDNA sequencing. The 29 biofilm strains belonged to 14 genera and 23.4% of all the possible pair-wise combinations coaggregated. The 15 planktonic strains belonged to seven genera and only 5.8% of all the possible pair-wise combinations coaggregated. Therefore, compared to the planktonic population, a greater proportion of the biofilm strains coaggregated. It is proposed that coaggregation influences biofilm formation and species diversity in freshwater under high shear.


Subject(s)
Bacteria/isolation & purification , Biofilms , Plankton/isolation & purification , Water Microbiology , Animals , Bacteria/drug effects , Bacterial Physiological Phenomena , Biofilms/drug effects , Biofilms/growth & development , Carbohydrates/pharmacology , DNA, Bacterial/genetics , DNA, Ribosomal/genetics , Fresh Water , Phylogeny , Plankton/drug effects , Plankton/physiology , RNA, Bacterial/genetics , RNA, Ribosomal, 16S/genetics , Rheology , Sequence Alignment , Sequence Homology, Nucleic Acid , Species Specificity
11.
J Appl Microbiol ; 93(2): 336-44, 2002.
Article in English | MEDLINE | ID: mdl-12147083

ABSTRACT

AIMS: To determine the susceptibility of planktonic and biofilm-grown strains of resident and transient skin bacteria to the liquid hand soap biocides para-chloro-meta-xylenol (PCMX) and triclosan. METHODS AND RESULTS: Freshly isolated hand bacteria were identified by partial 16S rRNA gene sequencing. Two resident and three transient strains, as well as four exogenous potential transient strains, were selected for biocide susceptibility testing. The minimum inhibitory concentrations (MIC) and minimum bactericidal concentrations (MBC) of planktonic cells were determined. Resident and transient strains showed a range of susceptibilities to both biocides (PCMX, MIC 12.5-200 mg x l(-1), MBC 100-400 mg x l(-1); triclosan, MIC 0.6- > 40 mg x l(-1), MBC 1.3- > 40 mg x l(-1)). Strains were attached to polystyrene plates for 65 h in 96-well microtitre plates and challenged with biocide to determine the biofilm inhibitory concentration and biofilm eradicating concentration. For all strains tested, biofilms were two- to eightfold less susceptible than planktonic cells to PCMX. CONCLUSIONS: Very few transients were detected on the hand. Transients were not more sensitive than residents to the biocides and susceptibility to PCMX and triclosan was strain dependent. Biofilm-grown strains were less susceptible to PCMX than planktonic cells. SIGNIFICANCE AND IMPACT OF THE STUDY: The study provides increased knowledge about the susceptibility of skin bacteria to biocides present in typical liquid antibacterial hand soaps and suggests that the concentration of biocide employed in such products is in excess of that required to kill the low numbers of transient bacteria typically found on skin.


Subject(s)
Anti-Infective Agents, Local/pharmacology , Gram-Negative Bacteria/drug effects , Hand/microbiology , Staphylococcus epidermidis/drug effects , Triclosan/pharmacology , Xylenes/pharmacology , Biofilms/growth & development , Drug Resistance, Bacterial , Humans , Microbial Sensitivity Tests , Polystyrenes , Soaps
12.
Appl Environ Microbiol ; 67(12): 5614-20, 2001 Dec.
Article in English | MEDLINE | ID: mdl-11722914

ABSTRACT

Presently there is no method available that allows noninvasive and real-time monitoring of fungal susceptibility to antimicrobial compounds. The green fluorescent protein (GFP) of the jellyfish Aequoria victoria was tested as a potential reporter molecule for this purpose. Aureobasidium pullulans was transformed to express cytosolic GFP using the vector pTEFEGFP (A. J. Vanden Wymelenberg, D. Cullen, R. N. Spear, B. Schoenike, and J. H. Andrews, BioTechniques 23:686-690, 1997). The transformed strain Ap1 gfp showed bright fluorescence that was amenable to quantification using fluorescence spectrophotometry. Fluorescence levels in Ap1 gfp blastospore suspensions were directly proportional to the number of viable cells determined by CFU plate counts (r(2) > 0.99). The relationship between cell viability and GFP fluorescence was investigated by adding a range of concentrations of each of the biocides sodium hypochlorite and 2-n-octylisothiozolin-3-one (OIT) to suspensions of Ap1 gfp blastospores (pH 5 buffer). These biocides each caused a rapid (< 25-min) loss of fluorescence of greater than 90% when used at concentrations of 150 microg of available chlorine ml(-1) and 500 microg ml(-1), respectively. Further, loss of GFP fluorescence from A. pullulans cells was highly correlated with a decrease in the number of viable cells (r(2) > 0.92). Losses of GFP fluorescence and cell viability were highly dependent on external pH; maximum losses of fluorescence and viability occurred at pH 4, while reduction of GFP fluorescence was absent at pH 8.0 and was associated with a lower reduction in viability. When A. pullulans was attached to the surface of plasticized poly(vinylchloride) containing 500 ppm of OIT, fluorescence decreased more slowly than in cell suspensions, with > 95% loss of fluorescence after 27 h. This technique should have broad applications in testing the susceptibility of A. pullulans and other fungal species to antimicrobial compounds.


Subject(s)
Ascomycota/drug effects , Ascomycota/metabolism , Fungicides, Industrial/pharmacology , Indicators and Reagents/metabolism , Luminescent Proteins/metabolism , Ascomycota/genetics , Ascomycota/growth & development , Green Fluorescent Proteins , Luminescent Proteins/genetics , Microbial Sensitivity Tests/methods , Spectrometry, Fluorescence , Spores, Fungal/drug effects , Spores, Fungal/genetics , Spores, Fungal/growth & development , Spores, Fungal/metabolism , Transformation, Genetic
13.
Appl Environ Microbiol ; 66(8): 3194-200, 2000 Aug.
Article in English | MEDLINE | ID: mdl-10919769

ABSTRACT

Significant substratum damage can occur when plasticized PVC (pPVC) is colonized by microorganisms. We investigated microbial colonization of pPVC in an in situ, longitudinal study. Pieces of pPVC containing the plasticizers dioctyl phthalate and dioctyl adipate (DOA) were exposed to the atmosphere for up to 2 years. Fungal and bacterial populations were quantified, and colonizing fungi were identified by rRNA gene sequencing and morphological characteristics. Aureobasidium pullulans was the principal colonizing fungus, establishing itself on the pPVC between 25 and 40 weeks of exposure. A group of yeasts and yeast-like fungi, including Rhodotorula aurantiaca and Kluyveromyces spp., established themselves on the pPVC much later (after 80 weeks of exposure). Numerically, these organisms dominated A. pullulans after 95 weeks, with a mean viable count +/- standard error of 1,000 +/- 200 yeast CFU cm(-2), compared to 390 +/- 50 A. pullulans CFU cm(-2). No bacterial colonization was observed. We also used in vitro tests to characterize the deteriogenic properties of fungi isolated from the pPVC. All strains of A. pullulans tested could grow with the intact pPVC formulation as the sole source of carbon, degrade the plasticizer DOA, produce extracellular esterase, and cause weight loss of the substratum during growth in vitro. In contrast, several yeast isolates could not grow on pPVC or degrade DOA. These results suggest that microbial succession may occur during the colonization of pPVC and that A. pullulans is critical to the establishment of a microbial community on pPVC.


Subject(s)
Fungi/growth & development , Fungi/metabolism , Polyvinyl Chloride , Ascomycota/classification , Ascomycota/growth & development , Ascomycota/metabolism , Bacteria/growth & development , Biodegradation, Environmental , Colony Count, Microbial , DNA, Fungal/analysis , DNA, Fungal/genetics , DNA, Ribosomal/analysis , DNA, Ribosomal/genetics , Fungi/classification , Kluyveromyces/classification , Kluyveromyces/growth & development , Kluyveromyces/metabolism , Molecular Sequence Data , Polyvinyl Chloride/chemistry , RNA, Ribosomal, 16S/genetics , Rhodotorula/classification , Rhodotorula/growth & development , Rhodotorula/metabolism , Sequence Analysis, DNA
14.
Appl Environ Microbiol ; 66(1): 431-4, 2000 Jan.
Article in English | MEDLINE | ID: mdl-10618261

ABSTRACT

Coaggregating strains of aquatic bacteria were identified by partial 16S rRNA gene sequencing. The coaggregation abilities of four strains of Blastomonas natatoria and one strain of Micrococcus luteus varied with culture age but were always maximum in the stationary phase of growth. Each member of a coaggregating pair carried either a heat- and protease-sensitive protein (lectin) adhesin or a saccharide receptor, as coaggregation was reversed by sugars.


Subject(s)
Bacterial Adhesion , Gram-Negative Aerobic Bacteria/growth & development , Micrococcus luteus/growth & development , Water Microbiology , Endopeptidases/metabolism , Lectins/metabolism , Molecular Sequence Data , Polysaccharides/metabolism
15.
Appl Environ Microbiol ; 65(8): 3575-81, 1999 Aug.
Article in English | MEDLINE | ID: mdl-10427051

ABSTRACT

Initial adhesion of fungi to plasticized polyvinyl chloride (pPVC) may determine subsequent colonization and biodeterioration processes. The deteriogenic fungus Aureobasidium pullulans was used to investigate the physicochemical nature of adhesion to both unplasticized PVC (uPVC) and pPVC containing the plasticizers dioctyl phthalate (DOP) and dioctyl adipate (DOA). A quantitative adhesion assay using image analysis identified fundamental differences in the mechanism of adhesion of A. pullulans blastospores to these substrata. Adhesion to pPVC was greater than that to uPVC by a maximum of 280% after a 4-h incubation with 10(8) blastospores ml(-1). That plasticizers enhance adhesion to PVC was confirmed by incorporating a dispersion of both DOA and DOP into the blastospore suspension. Adhesion to uPVC was increased by up to 308% in the presence of the dispersed plasticizers. Hydrophobic interactions were found to dominate adhesion to uPVC because (i) a strong positive correlation was observed between substratum hydrophobicity (measured by using a dynamic contact angle analyzer) and adhesion to a range of unplasticized polymers including uPVC, and (ii) neither the pH nor the electrolyte concentration of the suspension buffer, both of which influence electrostatic interactions, affected adhesion to uPVC. In contrast, adhesion to pPVC is principally controlled by electrostatic interactions. Enhanced adhesion to pPVC occurred despite a relative reduction of 13 degrees in the water contact angle of pPVC compared to that of uPVC. Furthermore, adhesion to pPVC was strongly dependent on both the pH and electrolyte concentration of the suspension medium, reaching maximum levels at pH 8 and with an electrolyte concentration of 10 mM NaCl. Plasticization with DOP and DOA therefore increases adhesion of A. pullulans blastospores to pPVC through an interaction mediated by electrostatic forces.


Subject(s)
Ascomycota/drug effects , Plasticizers/pharmacology , Polyvinyl Chloride , Ascomycota/growth & development , Biofilms/drug effects , Biofilms/growth & development , Cell Adhesion/drug effects , Electrolytes , Hydrogen-Ion Concentration , Kinetics , Microscopy, Electron, Scanning , Static Electricity
16.
J Bacteriol ; 181(10): 3087-95, 1999 May.
Article in English | MEDLINE | ID: mdl-10322009

ABSTRACT

It has been shown previously that inactivation of the cshA gene, encoding a major cell surface polypeptide (259 kDa) in the oral bacterium Streptococcus gordonii, generates mutants that are markedly reduced in hydrophobicity, deficient in binding to oral Actinomyces species and to human fibronectin, and unable to colonize the oral cavities of mice. We now show further that surface fibrils 60.7 +/- 14.5 nm long, which are present on wild-type S. gordonii DL1 (Challis) cells, bind CshA-specific antibodies and are absent from the cell surfaces of cshA mutants. To more precisely determine the structural and functional properties of CshA, already inferred from insertional-mutagenesis experiments, we have cloned the entire cshA gene into the replicative plasmid pAM401 and expressed full-length CshA polypeptide on the cell surface of heterologous Enterococcus faecalis JH2-2. Enterococci expressing CshA exhibited a 30-fold increase in cell surface hydrophobicity over E. faecalis JH2-2 carrying the pAM401 vector alone and 2.4-fold-increased adhesion to human fibronectin. CshA expression in E. faecalis also promoted cell-cell aggregation and increased the ability of enterococci to bind Actinomyces naeslundii cells. Electron micrographs of negatively stained E. faecalis cells expressing CshA showed peritrichous surface fibrils 70.3 +/- 9.1 nm long that were absent from control E. faecalis JH2-2(pAM401) cells. The fibrils bound CshA-specific antibodies, as detected by immunoelectron microscopy, and the antibodies inhibited the adhesion of E. faecalis cells to fibronectin. The results demonstrate that the CshA polypeptide is the structural and functional component of S. gordonii adhesive fibrils, and they provide a molecular basis for past correlations of surface fibril production, cell surface hydrophobicity, and adhesion in species of oral "sanguis-like" streptococci.


Subject(s)
Bacterial Adhesion , Bacterial Proteins/metabolism , Cell Wall/metabolism , Enterococcus faecalis/genetics , Membrane Proteins , Streptococcus/genetics , Actinomyces/metabolism , Antibodies, Bacterial , Bacterial Adhesion/drug effects , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Bacterial Proteins/immunology , Blotting, Western , Cell Wall/chemistry , Cell Wall/physiology , Cell Wall/ultrastructure , Enterococcus faecalis/growth & development , Enterococcus faecalis/metabolism , Fibronectins/antagonists & inhibitors , Fibronectins/metabolism , Humans , Microscopy, Electron , Molecular Weight , Phenotype , Polymers , Protein Binding/drug effects , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/metabolism , Streptococcus/physiology
17.
Lett Appl Microbiol ; 27(2): 101-5, 1998 Aug.
Article in English | MEDLINE | ID: mdl-9750331

ABSTRACT

Suspensions of Pseudomonas aeruginosa and Staphylococcus epidermidis, and biofilms established (16 h) on submerged glass and stainless steel (216 2B) coupons, were exposed to sodium hypochlorite (0.02% or 0.015% w/v), Dodigen (0.0015% w/v or 0.0006% w/v), sodium dodecylsulphate (6% w/v or 0.1% w/v) and Tween-80 (6% w/v) for 5 min at 20 degrees C. Survival was assessed by viable counts and blot succession. Biofilm bacteria were significantly less susceptible to these biocides than were planktonic cells, but their attachment to the surfaces was loosened by such treatments. Treatment with the non-ionic surfactant, Tween-80, however, strengthened the attachment of Staph. epidermidis to stainless steel. Such effects on attachment strength, which are species and surface dependent, have profound implications on post-treatment cleansing and possible re-contamination of product in clean-in-place (CIP) systems.


Subject(s)
Biofilms/drug effects , Disinfectants/pharmacology , Pseudomonas aeruginosa/physiology , Sodium Hypochlorite/pharmacology , Staphylococcus epidermidis/physiology , Surface-Active Agents/pharmacology , Bacterial Adhesion/drug effects , Biofilms/growth & development , Colony Count, Microbial , Glass , Polysorbates/pharmacology , Pseudomonas aeruginosa/drug effects , Sodium Dodecyl Sulfate/pharmacology , Stainless Steel , Staphylococcus epidermidis/drug effects
18.
J Appl Microbiol ; 85 Suppl 1: 29S-38S, 1998 Dec.
Article in English | MEDLINE | ID: mdl-21182690

ABSTRACT

The aim of this study was to compare biofilm accumulation and heterotrophic bacterial diversity on three pipe materials-cast iron, medium density polyethylene (MDPE), and unplasticised polyvinyl chloride (uPVC) - using a laboratory model system run over a short period (21 d) and a longer period (7 months). Newly Modified Robbins Devices (nMRD) were run in parallel, each containing 25 discs of one material with cold tap water flowing through the devices at 3 ml min(-1) (Reynolds Number 9.05) for 21 d. The numbers of bacteria on each material increased exponentially between 0 and 11 d when the biofilm viable count remained constant. The mean doubling times of the heterotrophic population on the materials during the exponential phase was 13.2 h for cast iron and 15.6 h for MDPE and uPVC. The same experiment was repeated under different environmental conditions with a lower temperature, higher free chlorine and lower number of organisms ml(-1) of incoming water. The exponential phase lengthened to 16 d but the steady state count remained the same. The mean viable count after 21 d and after 7 months was on average 97% higher on cast iron than on the other materials. Very few different colony types were isolated from each material with the largest number (nine) recovered from cast iron. The numbers of planktonic bacteria in the effluent water leaving each of the nMRDs directly correlated with the numbers in the biofilm phase on each of the materials. In addition the distribution and thickness of the biofilms on the MDPE and uPVC were observed using confocal scanning laser microscopy. In conclusion, MDPE and uPVC support the lowest numbers of bacteria in a steady state biofilm in the short term (21 d) and over a longer term (7 months). The diversity of heterotrophic bacteria was greatest on cast iron.


Subject(s)
Bacterial Physiological Phenomena , Biofilms , Manufactured Materials/microbiology , Water Microbiology , Water Supply/standards , Bacteria/growth & development , Bacteria/isolation & purification , Biofilms/drug effects , Chlorine/pharmacology , Colony Count, Microbial , Disinfectants/pharmacology , Iron , Polyethylene , Polyvinyl Chloride , Temperature , Time Factors
19.
FEMS Microbiol Lett ; 144(2-3): 241-7, 1996 Nov 01.
Article in English | MEDLINE | ID: mdl-8900069

ABSTRACT

The adhesion of three Staphylococcus epidermidis and three S aureus clinical isolates, to uncoated and hydrogel-coated polyurethane catheters was tested, following pretreatment of catheters with human plasma. Plasma significantly decreased the adhesion of S. epidermidis strains to uncoated polyurethane catheters, but had no significant effect on the adhesion to hydrogel-coated catheters. The influence of plasma on adhesion of S. aureus strains to catheters was strain dependent. Plasma significantly increased the adhesion of one strain (SA6) to uncoated catheters. For two other strains (SA3 and SA14) plasma produced no clear effect on their adhesion to uncoated catheters; adhesion values for each strain showed either a small but significant increase or a replicate-dependent increase or decrease. However, plasma significantly increased the adhesion of all S. aureus strains to hydrogel-coated polyurethane catheters. Overall, with the exception of one batch culture of S. epidermidis strain SE3 tested, attachment to plasma-treated hydrogel coated catheters was statistically significantly lower, by up to 85%, than attachment to plasma-treated uncoated catheters for both S. epidermidis and S. aureus.


Subject(s)
Bacterial Adhesion/drug effects , Catheterization , Plasma , Polyethylene Glycols/pharmacology , Polyurethanes/metabolism , Staphylococcus aureus/drug effects , Staphylococcus epidermidis/drug effects , Adsorption , Catheterization, Central Venous , Equipment Contamination , Humans , Hydrogel, Polyethylene Glycol Dimethacrylate , Staphylococcus aureus/cytology , Staphylococcus aureus/isolation & purification , Staphylococcus epidermidis/cytology , Staphylococcus epidermidis/isolation & purification
20.
Biochim Biophys Acta ; 1283(2): 207-14, 1996 Sep 04.
Article in English | MEDLINE | ID: mdl-8809101

ABSTRACT

Cationic liposomes have been prepared from dipalmitoylphosphatidylcholine (DPPC), cholesterol (Chol) and stearylamine (SA). These phospholipid vesicles were exposed to adsorbed biofilms of the skin-associated bacteria Staphylococcus epidermidis, to which they showed a strong affinity. The interaction (as assessed by the apparent monolayer coverage of the biofilms by liposomes) was described in terms of a Langmuir adsorption isotherm which enabled determination of the maximum theoretical coverage of the bacterial surface and association/dissociation constants. The interaction was shown to be dependent on the ionic strength of the surrounding medium; on increasing the ionic strength the biofilm-vesicle dissociation constant decreased. This suggested that the adsorption was mediated by electrostatic effects. The adsorption of the vesicles was examined at various temperatures, enabling determination of thermodynamic parameters for the interaction. The adsorbed state of the liposomes was energetically favoured and the interaction was enthalpy driven. The Gibbs energies of adsorption were in a range from -15 to -19 kJ mol-1 and the enthalpies of adsorption from -26 to -22 kJ mol-1. Studies using cell populations of different hydrophobicity showed that the hydrophobic character of the bacterial cells also had an effect on the adsorption of the vesicles to the biofilm.


Subject(s)
Biofilms , Liposomes/metabolism , Skin/microbiology , Staphylococcus epidermidis , Adsorption , Bacterial Adhesion/genetics , Cations , Colony Count, Microbial , Electrochemistry , Mutation , Osmolar Concentration , Staphylococcus epidermidis/chemistry , Staphylococcus epidermidis/physiology , Temperature , Thermodynamics
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