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Res Microbiol ; 164(8): 815-20, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23770248

ABSTRACT

Erwinia amylovora causes economic losses that affect pear and apple production in Morocco. Here, we report comparative genomics of four Moroccan E. amylovora strains with the European strain CFBP1430 and North-American strain ATCC49946. Analysis of single nucleotide polymorphisms (SNPs) revealed genetic homogeneity of Moroccan's strains and their proximity to the European strain CFBP1430. Moreover, the collected sequences allowed the assembly of a 65 kpb plasmid, which is highly similar to the plasmid pEI70 harbored by several European E. amylovora isolates. This plasmid was found in 33% of the 40 E. amylovora strains collected from several host plants in 2009 and 2010 in Morocco.


Subject(s)
Environmental Microbiology , Erwinia amylovora/genetics , Genome, Bacterial , Plasmids , Polymorphism, Single Nucleotide , Erwinia amylovora/isolation & purification , Europe , High-Throughput Nucleotide Sequencing , Malus/microbiology , Molecular Sequence Data , Morocco , North America , Pyrus/microbiology
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