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1.
Radiol Case Rep ; 19(8): 3596, 2024 Aug.
Article in English | MEDLINE | ID: mdl-39022116

ABSTRACT

[This corrects the article DOI: 10.1016/j.radcr.2021.06.006.].

2.
Nat Rev Rheumatol ; 19(7): 429-445, 2023 Jul.
Article in English | MEDLINE | ID: mdl-37225964

ABSTRACT

Bone marrow lesions (BMLs), which are early signs of osteoarthritis (OA) that are associated with the presence, onset and severity of pain, represent an emerging imaging biomarker and clinical target. Little is known, however, regarding their early spatial and temporal development, structural relationships or aetiopathogenesis, because of the sparsity of human early OA imaging and paucity of relevant tissue samples. The use of animal models is a logical approach to fill the gaps in our knowledge, and it can be informed by appraising models in which BMLs and closely related subchondral cysts have already been reported, including in spontaneous OA and pain models. The utility of these models in OA research, their relevance to clinical BMLs and practical considerations for their optimal deployment can also inform medical and veterinary clinicians and researchers alike.


Subject(s)
Bone Marrow , Osteoarthritis, Knee , Humans , Animals , Bone Marrow/pathology , Osteoarthritis, Knee/diagnosis , Magnetic Resonance Imaging/methods , Pain , Models, Animal
3.
J Autism Dev Disord ; 2022 Dec 22.
Article in English | MEDLINE | ID: mdl-36547792

ABSTRACT

Autistic college students are often forced to navigate stigma on campus, but little is known about how autistic college students manage communicated stigma. Semi-structured interviews with ten autistic college students were conducted to explore how they manage peer stigma. Interpretative Phenomenological Analysis (IPA) was used to identify three themes from the data: First, participants seek to avoid peer stigma by concealing attributes associated with autism. Next, participants buffer against peer stigma by engaging in favorable social comparison. Finally, participants perceive the autism label as highly stigmatizing, necessitating limited disclosure on campus. These results can help researchers and practitioners focus efforts to promote neurodiversity to both autistic students and their peers on campus.

4.
Radiol Case Rep ; 16(9): 2609-2613, 2021 Sep.
Article in English | MEDLINE | ID: mdl-34285730

ABSTRACT

Juvenile granulosa cell tumor is a rare tumor diagnosed in children, which can present with precocious puberty. We have reported a case of a 6-month-old female patient who presented with precocious puberty. Abdominopelvic imaging revealed a large mixed cystic and solid mass, with internal solid enhancement, and restricted diffusion. At surgery, mass was confirmed to arise from the left ovary, and histopathology confirmed juvenile granulosa cell tumor. We provide a literature review of juvenile granulosa cell tumor and discuss imaging characteristics of this diagnosis.

5.
J Emerg Manag ; 17(3): 217-224, 2019.
Article in English | MEDLINE | ID: mdl-31245833

ABSTRACT

Disaster mental health (DMH), also referred to as disaster behavioral health, and crisis intervention more broadly, is a significant, yet relatively nonstandardized response system in the United States. Higher education can play a critical role in shifting understanding of DMH, its place within emergency management, and skills building among students. With the increased need for qualified DMH practitioners growing, the academy is uniquely positioned to train students as they become our future responders. Movement toward standardized curriculum and certification programs within schools of social work and emergency management can alleviate lack of knowledge and training as well as better prepare emergency managers and behavioral health professionals to respond to the emotional and mental wellbeing of those impacted by disasters (natural or human-caused).


Subject(s)
Disaster Medicine/education , Disaster Planning , Disasters , Emergencies , Mental Health/education , Curriculum , Emergency Medical Services/organization & administration , Humans , Schools , United States
6.
Plant J ; 97(2): 341-351, 2019 01.
Article in English | MEDLINE | ID: mdl-30300943

ABSTRACT

The FERONIA (FER) signaling pathway is known to have diverse roles in Arabidopsis thaliana, such as growth, reproduction, and defense, but how this receptor kinase is involved in various biological processes is not well established. In this work, we applied multiple mass spectrometry techniques to identify metabolites involved in the FER signaling pathway and to understand their biological roles. A direct infusion Fourier transform ion cyclotron resonance (FT-ICR)-MS approach was used for initial screening of wild-type and feronia (fer) mutant plant extracts, and Arabidopsides were found to be significantly enriched in the mutant. As Arabidopsides are known to be induced by wounding, further experiments on wounded and non-wounded leaf samples were carried out to investigate these oxylipins as well as related phytohormones using a quadrupole-time-of-flight (Q-TOF) MS by direct injection and LC-MS/MS. In a root growth bioassay with Arabidopside A isolated from fer mutants, the wild-type showed significant root growth inhibition compared with the fer mutant. Our results therefore implicated Arabidopsides, and Arabidopside A specifically, in FER functions and/or signaling. Finally, matrix-assisted laser desorption/ionization MS imaging (MALDI-MSI) was used to visualize the localization of Arabidopsides, and we confirmed that Arabidopsides are highly abundant at wounding sites in both wild-type and fer mutant leaves. More significantly, five micron high-spatial resolution MALDI-MSI revealed that Arabidopsides are localized to the chloroplasts where many stress signaling molecules are made.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis/genetics , Galactolipids/metabolism , Oxylipins/metabolism , Pheophytins/metabolism , Phosphotransferases/genetics , Signal Transduction/genetics , Arabidopsis/growth & development , Arabidopsis/physiology , Arabidopsis Proteins/metabolism , Biomarkers/metabolism , Chloroplasts/metabolism , Chromatography, Liquid , Mutation , Phosphotransferases/metabolism , Plant Roots/genetics , Plant Roots/growth & development , Plant Roots/physiology , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Tandem Mass Spectrometry
7.
J Am Soc Mass Spectrom ; 30(2): 299-308, 2019 Feb.
Article in English | MEDLINE | ID: mdl-30341582

ABSTRACT

Nanoparticles are efficient matrices in laser desorption/ionization (LDI) mass spectrometry (MS), especially for the profiling or imaging of small molecules. Recently, solvent-free physical vapor desorption (PVD), or sputter coating, was adopted as a homogenous method to rapidly apply metal nanoparticles (NPs) in situ to samples prior to LDI MS or MS imaging analysis. However, there has been no systematic study comparing different metal targets for the analysis of a variety of small molecule metabolites. Here, we present a screening and optimization of various sputter-coated metals, including Ag, Au, Cu, Pt, Ni, and Ti, for LDI analysis of small molecules in both positive and negative ion modes. Optimized sputter coating is then applied to high-spatial resolution LDI mass spectrometry imaging (MSI) of maize root and seed cross-sections. Noble metals, Ag, Au, and Pt, are found to be much more efficient than transition metals and organic matrices for most small metabolites. Sputter-coated metals are efficient for neutral lipids, such as triacylglycerols and diacylglycerols, but are very inefficient for most phospholipids. Graphical Abstract ᅟ.


Subject(s)
Metal Nanoparticles/chemistry , Nanotechnology/methods , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Zea mays/metabolism , Image Processing, Computer-Assisted , Metals/chemistry , Plant Roots/chemistry , Plant Roots/metabolism , Seeds/chemistry , Solubility , Zea mays/chemistry
8.
Anal Bioanal Chem ; 411(1): 147-156, 2019 Jan.
Article in English | MEDLINE | ID: mdl-30377739

ABSTRACT

A high-throughput matrix-assisted laser desorption/ionization mass spectrometry (MALDI)-MS-based metabolomics platform was developed using a pre-fabricated microarray of nanoparticles and organic matrices. Selected organic matrices, inorganic nanoparticle (NP) suspensions, and sputter coated metal NPs, as well as various additives, were tested for metabolomics analysis of the turkey gut microbiome. Four NPs and one organic matrix were selected as the optimal matrix set: α-cyano-4-hydroycinnamic acid, Fe3O4 and Au NPs in positive ion mode with 10 mM sodium acetate, and Cu and Ag NPs in negative ion mode with no additive. Using this set of five matrices, over two thousand unique metabolite features were reproducibly detected across intestinal samples from turkeys fed a diet amended with therapeutic or sub-therapeutic antibiotics (200 g/ton or 50 g/ton bacitracin methylene disalicylate (BMD), respectively), or non-amended feed. Among the thousands of unique features, 56 of them were chemically identified using MALDI-MS/MS, with the help of in-parallel liquid chromatography (LC)-MS/MS analysis. Lastly, as a proof of concept application, this protocol was applied to 52 turkey cecal samples at three different time points from the antibiotic feed trial. Statistical analysis indicated variations in the metabolome of turkeys with different ages or treatments. Graphical abstract ᅟ.


Subject(s)
Anti-Bacterial Agents/administration & dosage , Bacitracin/administration & dosage , High-Throughput Screening Assays/methods , Intestines/microbiology , Metabolomics , Microbiota , Nanoparticles/chemistry , Salicylates/administration & dosage , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Turkeys/microbiology , Animals , Chromatography, Liquid/methods , Copper/chemistry , Coumaric Acids/chemistry , Dose-Response Relationship, Drug , Ferrosoferric Oxide/chemistry , Gold/chemistry , Metal-Organic Frameworks , Proof of Concept Study , Reproducibility of Results , Silver/chemistry , Tandem Mass Spectrometry/methods
9.
Chem Rec ; 18(1): 65-77, 2018 Jan.
Article in English | MEDLINE | ID: mdl-28685965

ABSTRACT

Mass spectrometry imaging (MSI) is a powerful tool that has advanced our understanding of complex biological processes by enabling unprecedented details of metabolic biology to be uncovered. Through the use of high-spatial resolution MSI, metabolite localizations can be obtained with high precision. Here we describe our recent progress to enhance the spatial resolution of matrix-assisted laser desorption/ionization (MALDI) MSI from ∼50 µm with the commercial configuration to ∼5 µm. Additionally, we describe our efforts to develop a 'multiplex MSI' data acquisition method to allow more chemical information to be obtained on a single tissue in a single instrument run, and the development of new matrices to improve the ionization efficiency for a variety of small molecule metabolites. In combination, these contributions, along with the efforts of others, will bring MSI experiments closer to achieving metabolomic scale.


Subject(s)
Metabolomics , Plant Cells/metabolism , Plants/metabolism , Single-Cell Analysis , 2-Naphthylamine/analogs & derivatives , 2-Naphthylamine/chemistry , Plant Cells/chemistry , Plants/chemistry , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization
10.
J Am Soc Mass Spectrom ; 28(9): 1910-1918, 2017 09.
Article in English | MEDLINE | ID: mdl-28493035

ABSTRACT

Metabolomics experiments require chemical identifications, often through MS/MS analysis. In mass spectrometry imaging (MSI), this necessitates running several serial tissue sections or using a multiplex data acquisition method. We have previously developed a multiplex MSI method to obtain MS and MS/MS data in a single experiment to acquire more chemical information in less data acquisition time. In this method, each raster step is composed of several spiral steps and each spiral step is used for a separate scan event (e.g., MS or MS/MS). One main limitation of this method is the loss of spatial resolution as the number of spiral steps increases, limiting its applicability for high-spatial resolution MSI. In this work, we demonstrate multiplex MS imaging is possible without sacrificing spatial resolution by the use of overlapping spiral steps, instead of spatially separated spiral steps as used in the previous work. Significant amounts of matrix and analytes are still left after multiple spectral acquisitions, especially with nanoparticle matrices, so that high quality MS and MS/MS data can be obtained on virtually the same tissue spot. This method was then applied to visualize metabolites and acquire their MS/MS spectra in maize leaf cross-sections at 10 µm spatial resolution. Graphical Abstract ᅟ.

11.
Nat Cell Biol ; 18(12): 1357-1366, 2016 Dec.
Article in English | MEDLINE | ID: mdl-27820601

ABSTRACT

DNA double-strand breaks (DSBs) are highly cytotoxic DNA lesions, whose accurate repair by non-homologous end-joining (NHEJ) or homologous recombination (HR) is crucial for genome integrity and is strongly influenced by the local chromatin environment. Here, we identify SCAI (suppressor of cancer cell invasion) as a 53BP1-interacting chromatin-associated protein that promotes the functionality of several DSB repair pathways in mammalian cells. SCAI undergoes prominent enrichment at DSB sites through dual mechanisms involving 53BP1-dependent recruitment to DSB-surrounding chromatin and 53BP1-independent accumulation at resected DSBs. Cells lacking SCAI display reduced DSB repair capacity, hypersensitivity to DSB-inflicting agents and genome instability. We demonstrate that SCAI is a mediator of 53BP1-dependent repair of heterochromatin-associated DSBs, facilitating ATM kinase signalling at DSBs in repressive chromatin environments. Moreover, we establish an important role of SCAI in meiotic recombination, as SCAI deficiency in mice leads to germ cell loss and subfertility associated with impaired retention of the DMC1 recombinase on meiotic chromosomes. Collectively, our findings uncover SCAI as a physiologically important component of both NHEJ- and HR-mediated pathways that potentiates DSB repair efficiency in specific chromatin contexts.


Subject(s)
Chromosomes, Mammalian/metabolism , DNA Breaks, Double-Stranded , DNA Repair , Transcription Factors/metabolism , Tumor Suppressor p53-Binding Protein 1/metabolism , Animals , Ataxia Telangiectasia Mutated Proteins/metabolism , Cell Line , Cell Line, Transformed , Embryo, Mammalian/cytology , Fibroblasts/metabolism , Germ Cells/cytology , Germ Cells/metabolism , Green Fluorescent Proteins/metabolism , Heterochromatin/metabolism , Homologous Recombination/genetics , Humans , Meiosis , Mice , Protein Binding , Signal Transduction , Xenopus
12.
Anal Chem ; 88(18): 8926-30, 2016 09 20.
Article in English | MEDLINE | ID: mdl-27573492

ABSTRACT

Nanoparticles (NPs) have been suggested as efficient matrixes for small molecule profiling and imaging by laser-desorption ionization mass spectrometry (LDI-MS), but so far there has been no systematic study comparing different NPs in the analysis of various classes of small molecules. Here, we present a large scale screening of 13 NPs for the analysis of two dozen small metabolite molecules. Many NPs showed much higher LDI efficiency than organic matrixes in positive mode and some NPs showed comparable efficiencies for selected analytes in negative mode. Our results suggest that a thermally driven desorption process is a key factor for metal oxide NPs, but chemical interactions are also very important, especially for other NPs. The screening results provide a useful guideline for the selection of NPs in the LDI-MS analysis of small molecules.

13.
Analyst ; 140(21): 7293-304, 2015 Nov 07.
Article in English | MEDLINE | ID: mdl-26339687

ABSTRACT

Mass spectrometry imaging (MSI) provides high spatial resolution information that is unprecedented in traditional metabolomics analyses; however, the molecular coverage is often limited to a handful of compounds and is insufficient to understand overall metabolomic changes of a biological system. Here, we propose an MSI methodology to increase the diversity of chemical compounds that can be imaged and identified, in order to eventually perform untargeted metabolomic analysis using MSI. In this approach, we use the desorption/ionization bias of various matrixes for different metabolite classes along with dual polarities and a tandem MSI strategy. The use of multiple matrixes and dual polarities allows us to visualize various classes of compounds, while data-dependent MS/MS spectra acquired in the same MSI scans allow us to identify the compounds directly on the tissue. In a proof of concept application to a germinated corn seed, a total of 166 unique ions were determined to have high-quality MS/MS spectra, without counting structural isomers, of which 52 were identified as unique compounds. According to an estimation based on precursor MSI datasets, we expect over five hundred metabolites could be potentially identified and visualized once all experimental conditions are optimized and an MS/MS library is available. Lastly, metabolites involved in the glycolysis pathway and tricarboxylic acid cycle were imaged to demonstrate the potential of this technology to better understand metabolic biology.


Subject(s)
Ions/chemistry , Seeds/metabolism , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Tandem Mass Spectrometry/methods , Zea mays/metabolism , Ceramides/chemistry , Citric Acid Cycle , Germination , Metabolome , Metabolomics , Metal Nanoparticles/chemistry , Silver/chemistry
14.
Science ; 348(6234): 1253671, 2015 May 01.
Article in English | MEDLINE | ID: mdl-25931565

ABSTRACT

DNA interstrand cross-links (ICLs) block replication fork progression by inhibiting DNA strand separation. Repair of ICLs requires sequential incisions, translesion DNA synthesis, and homologous recombination, but the full set of factors involved in these transactions remains unknown. We devised a technique called chromatin mass spectrometry (CHROMASS) to study protein recruitment dynamics during perturbed DNA replication in Xenopus egg extracts. Using CHROMASS, we systematically monitored protein assembly and disassembly on ICL-containing chromatin. Among numerous prospective DNA repair factors, we identified SLF1 and SLF2, which form a complex with RAD18 and together define a pathway that suppresses genome instability by recruiting the SMC5/6 cohesion complex to DNA lesions. Our study provides a global analysis of an entire DNA repair pathway and reveals the mechanism of SMC5/6 relocalization to damaged DNA in vertebrate cells.


Subject(s)
DNA Damage , DNA Repair Enzymes/metabolism , DNA Repair , DNA Replication , Animals , Chromatin/chemistry , Chromatin/metabolism , DNA-Binding Proteins/metabolism , Mass Spectrometry/methods , Proteomics/methods , RNA-Binding Proteins/metabolism , Xenopus
15.
J Cell Biol ; 201(6): 797-807, 2013 Jun 10.
Article in English | MEDLINE | ID: mdl-23751493

ABSTRACT

Protein modifications by ubiquitin and small ubiquitin-like modifier (SUMO) play key roles in cellular signaling pathways. SUMO-targeted ubiquitin ligases (STUbLs) directly couple these modifications by selectively recognizing SUMOylated target proteins through SUMO-interacting motifs (SIMs), promoting their K48-linked ubiquitylation and degradation. Only a single mammalian STUbL, RNF4, has been identified. We show that human RNF111/Arkadia is a new STUbL, which used three adjacent SIMs for specific recognition of poly-SUMO2/3 chains, and used Ubc13-Mms2 as a cognate E2 enzyme to promote nonproteolytic, K63-linked ubiquitylation of SUMOylated target proteins. We demonstrate that RNF111 promoted ubiquitylation of SUMOylated XPC (xeroderma pigmentosum C) protein, a central DNA damage recognition factor in nucleotide excision repair (NER) extensively regulated by ultraviolet (UV)-induced SUMOylation and ubiquitylation. Moreover, we show that RNF111 facilitated NER by regulating the recruitment of XPC to UV-damaged DNA. Our findings establish RNF111 as a new STUbL that directly links nonproteolytic ubiquitylation and SUMOylation in the DNA damage response.


Subject(s)
DNA Repair/physiology , Nuclear Proteins/metabolism , Small Ubiquitin-Related Modifier Proteins/metabolism , Sumoylation/physiology , Ubiquitin-Protein Ligases/metabolism , Ubiquitins/metabolism , Cell Line, Transformed , DNA Damage/physiology , HeLa Cells , Humans , Ligases/genetics , Ligases/metabolism , Nuclear Proteins/genetics , Plasmids/genetics , RNA, Small Interfering/genetics , Signal Transduction/physiology , Signal Transduction/radiation effects , Small Ubiquitin-Related Modifier Proteins/genetics , Sumoylation/radiation effects , Ubiquitin-Conjugating Enzymes/genetics , Ubiquitin-Conjugating Enzymes/metabolism , Ubiquitin-Protein Ligases/genetics , Ubiquitination/physiology , Ubiquitination/radiation effects , Ubiquitins/genetics , Ultraviolet Rays/adverse effects
17.
Arch Pediatr Adolesc Med ; 162(8): 769-73, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18678810

ABSTRACT

OBJECTIVES: To estimate the frequency of occult depressive symptoms in adolescent emergency department (ED) patients (aged 13-17 years) and to determine patient characteristics associated with depressive symptoms. DESIGN: A cross-sectional study of adolescent ED patients. SETTING: The pediatric ED of Hennepin County Medical Center in Minneapolis, Minnesota, and the EDs of the Children's Hospitals and Clinics of Minnesota. PATIENTS: Medically stable adolescent ED patients with nonpsychiatric concerns. INTERVENTIONS: Patients completed the Beck Depression Inventory II and answered questions about their attitudes, activities, and lifestyle choices. Guardians were asked about family demographics, living situations, and other patient characteristics. MAIN OUTCOME MEASURES: The frequency of moderate and severe depressive symptoms as measured by the Beck Depression Inventory II. Group results were analyzed with descriptive statistics; patient characteristics associated with depressive symptoms were determined by multivariate analysis. RESULTS: A total of 967 patients were enrolled. According to the Beck Depression Inventory II, 20% (197 patients) had moderate to severe depressive symptoms. Of these, 58% recognized their depressive symptoms and 50% were recognized by their guardians as having depressive symptoms. When compared with nondepressed patients, adolescents with depressive symptoms more often were female, were not involved in organized social activities, knew someone who intentionally hurt himself or herself or died a violent death, were currently involved in a sexual relationship, or used street drugs. Race, family income, family stability, and witnessing violence were not associated with a positive depression screen result. CONCLUSIONS: Depressive symptoms occur frequently among adolescents and are often unrecognized. Efforts to increase awareness of depression among ED physicians, adolescents, and parents of adolescents may be beneficial.


Subject(s)
Depression/diagnosis , Depression/epidemiology , Emergency Service, Hospital , Adolescent , Cross-Sectional Studies , Female , Follow-Up Studies , Humans , Incidence , Logistic Models , Male , Multivariate Analysis , Probability , Psychiatric Status Rating Scales , Psychological Tests , Risk Assessment , Severity of Illness Index , Surveys and Questionnaires , United States/epidemiology
18.
J Child Psychol Psychiatry ; 43(2): 245-53, 2002 Feb.
Article in English | MEDLINE | ID: mdl-11902603

ABSTRACT

BACKGROUND: This study examined measures of social communication that involve the use of language in formulating and organizing thoughts and its relationship with seizure-related, developmental, cognitive, and behavioral variables in 92 children with complex partial seizure disorder (CPS), 51 with primary generalized epilepsy (PGE), and 117 normal children, aged 5.1-16.9 years. METHODS: Coding the children's speech samples with the Kiddie Formal Thought Disorder Rating Scale (Caplan et al., 1989) and Halliday and Hasan's (1976) analysis of cohesion demonstrated social communication deficits in both seizure disorder groups. RESULTS: The CPS patients had both formal thought disorder and cohesion deficits and the PGE group had mild cohesion deficits. IQ, as well as fronto-temporal and bilateral spike and wave activity were associated with the severity of the social communication deficits of the CPS group. The social communication deficits of the PGE group, however, were related to IQ and seizure control. CONCLUSIONS: Recurrent CPS and PGE and fronto-temporal localization of epileptic activity might impair the development of children's communication skills.


Subject(s)
Communication , Epilepsy, Complex Partial/psychology , Epilepsy, Generalized/psychology , Language Development Disorders/psychology , Social Behavior , Thinking , Adolescent , Child , Child, Preschool , Epilepsy, Complex Partial/diagnosis , Epilepsy, Generalized/diagnosis , Female , Humans , Language Development Disorders/diagnosis , Male , Neuropsychological Tests
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