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1.
Acc Chem Res ; 57(11): 1620-1632, 2024 Jun 04.
Article in English | MEDLINE | ID: mdl-38752454

ABSTRACT

ConspectusNanoporous frameworks are a large and diverse family of supramolecular materials, whose chemical building units (organic, inorganic, or both) are assembled into a 3D architecture with well-defined connectivity and topology, featuring intrinsic porosity. These materials play a key role in various industrial processes and applications, such as energy production and conversion, fluid separation, gas storage, water harvesting, and many more. The performance and suitability of nanoporous materials for each specific application are directly related to both their physical and chemical properties, and their determination is crucial for process engineering and optimization of performances. In this Account, we focus on some recent developments in the multiscale modeling of physical properties of nanoporous frameworks, highlighting the latest advances in three specific areas: mechanical properties, thermal properties, and adsorption.In the study of the mechanical behavior of nanoporous materials, the past few years have seen a rapid acceleration of research. For example, computational resources have been pooled to create a public large-scale database of elastic constants as part of the Materials Project initiative to accelerate innovation in materials research: those can serve as a basis for data-based discovery of materials with targeted properties, as well as the training of machine learning predictor models.The large-scale prediction of thermal behavior, in comparison, is not yet routinely performed at such a large scale. Tentative databases have been assembled at the DFT level on specific families of materials, such as zeolites, but prediction at larger scale currently requires the use of transferable classical force fields, whose accuracy can be limited.Finally, adsorption is naturally one of the most studied physical properties of nanoporous frameworks, as fluid separation or storage is often the primary target for these materials. We highlight the recent achievements and open challenges for adsorption prediction at a large scale, focusing in particular on the accuracy of computational models and the reliability of comparisons with experimental data available. We detail some recent methodological improvements in the prediction of adsorption-related properties: in particular, we describe the recent research efforts to go beyond the study of thermodynamic quantities (uptake, adsorption enthalpy, and thermodynamic selectivity) and predict transport properties using data-based methods and high-throughput computational schemes. Finally, we stress the importance of data-based methods of addressing all sources of uncertainty.The Account concludes with some perspectives about the latest developments and open questions in data-based approaches and the integration of computational and experimental data together in the materials discovery loop.

2.
J Phys Chem A ; 126(38): 6628-6636, 2022 Sep 29.
Article in English | MEDLINE | ID: mdl-36103312

ABSTRACT

Self-assembled artificial water channels (AWCs) are reshaping current water desalination technologies. Recently, the improvements achieved by incorporating hydrophilic compounds into polyamide membranes (PA) at the interface were confirmed experimentally. However, the determination of the nanoscale structures of AWCs remains unclear. An important step in the preparation of PA membranes is the solubilization of a colloidal suspension of the solid phase in a water-ethanol mixture. We perform molecular dynamics simulations to study the nanoscale structures of AWC aggregates. We characterize the size and shape of the aggregates at several key locations in the ternary phase diagram. The role of ethanol in the formation of the interface between the solvent and the solute phase is highlighted. We found that the structure of the aggregates formed in the ternary solution resembled the disordered sponge-like structures observed when AWCs were inserted into lipid membranes. Such permeable sponge architectures allow the passage of water despite their noncrystalline organization and were previously shown to be consistent with AWC permeation measurements in membrane environments.


Subject(s)
Aquaporins , Water , Ethanol/chemistry , Lipids , Membranes, Artificial , Nylons , Solvents , Water/chemistry
3.
J Chem Phys ; 154(18): 184102, 2021 May 14.
Article in English | MEDLINE | ID: mdl-34241013

ABSTRACT

Understanding water transport mechanisms at the nanoscale level remains a challenge for theoretical chemical physics. Major advances in chemical synthesis have allowed us to discover new artificial water channels, rivaling with or even surpassing water conductance and selectivity of natural protein channels. In order to interpret experimental features and understand microscopic determinants for performance improvements, numerical approaches based on all-atom molecular dynamics simulations and enhanced sampling methods have been proposed. In this study, we quantify the influence of microscopic observables, such as channel radius and hydrogen bond connectivity, and of meso-scale features, such as the size of self-assembly blocks, on the permeation rate of a self-assembled nanocrystal-like artificial water channel. Although the absolute permeation rate extrapolated from these simulations is overestimated by one order of magnitude compared to the experimental measurement, the detailed analysis of several observed conductive patterns in large assemblies opens new pathways to scalable membranes with enhanced water conductance for the future design.

4.
J Am Chem Soc ; 143(11): 4224-4233, 2021 03 24.
Article in English | MEDLINE | ID: mdl-33635056

ABSTRACT

Artificial water channels (AWCs) are known to selectively transport water, with ion exclusion. Similarly to natural porins, AWCs encapsulate water wires or clusters, offering continuous and iterative H-bonding that plays a vital role in their stabilization. Herein, we report octyl-ureido-polyol AWCs capable of self-assembly into hydrophilic hydroxy channels. Variants of ethanol, propanediol, and trimethanol are used as head groups to modulate the water transport permeabilities, with rejection of ions. The hydroxy channels achieve a single-channel permeability of 2.33 × 108 water molecules per second, which is within the same order of magnitude as the transport rates for aquaporins. Depending on their concentration in the membrane, adaptive channels are observed in the membrane. Over increased concentrations, a significant shift occurs, initiating unexpected higher water permeation. Molecular simulations probe that spongelike or cylindrical aggregates can form to generate transient cluster water pathways through the bilayer. Altogether, the adaptive self-assembly is a key feature influencing channel efficiency. The adaptive channels described here may be considered an important milestone contributing to the systematic discovery of artificial water channels for water desalination.

5.
Angew Chem Int Ed Engl ; 59(51): 23213-23219, 2020 12 14.
Article in English | MEDLINE | ID: mdl-32905651

ABSTRACT

Artificial water channels mimicking natural aquaporins (AQPs) can be used for selective and fast transport of water. Here, we quantify the transport performances of peralkyl-carboxylate-pillar[5]arenes dimers in bilayer membranes. They can transport ≈107 water molecules/channel/second, within one order of magnitude of the transport rates of AQPs, rejecting Na+ and K+ cations. The dimers have a tubular structure, superposing pillar[5]arene pores of 5 Šdiameter with twisted carboxy-phenyl pores of 2.8 Šdiameter. This biomimetic platform, with variable pore dimensions within the same structure, offers size restriction reminiscent of natural proteins. It allows water molecules to selectively transit and prevents bigger hydrated cations from passing through the 2.8 Špore. Molecular simulations prove that dimeric or multimeric honeycomb aggregates are stable in the membrane and form water pathways through the bilayer. Over time, a significant shift of the upper vs. lower layer occurs initiating new unexpected water permeation events through toroidal pores.


Subject(s)
Aquaporins/chemistry , Biomimetic Materials/chemistry , Calixarenes/chemistry , Dimerization , Molecular Dynamics Simulation , Molecular Structure
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