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1.
Int Nurs Rev ; 2023 Aug 30.
Article in English | MEDLINE | ID: mdl-37647227

ABSTRACT

AIM: To explore factors associated with academic performance in the Master of Nursing programme. BACKGROUND: Advanced practice nursing preparatory education generally involves completion of the Master of Nursing programme. While prior clinical experiences and on-the-job training are believed to underpin the preparation for such education, studies have suggested only weak or no associations between nurses' academic success in graduate schools and their clinical experiences. METHODS: A retrospective cohort study was conducted in the nursing department of a university in Singapore. Academic and demographic data were extracted in February 2020 from a shared repository of anonymised teaching and learning data. R was used to select and merge data tables into a usable format for subsequent analysis. Students enrolled between 2010 and 2017 were included for the analysis (n = 246). RESULTS: Age was statistically significantly associated with overall cumulative academic performance (p < 0.001). Younger students on average academically outperformed older students. Unmarried students were associated with better cumulative academic performance in the Clinical Practicum 2 module (p = 0.018). CONCLUSION: Younger students have historically outperformed their older counterparts in the Master of Nursing programme. There is a need to reassess the requirement of five years of clinical experience as an admission criterion for the Master of Nursing programme in Singapore. IMPLICATIONS FOR NURSING POLICY: There is a need to re-evaluate the admission criteria to better engage and retain younger nurses interested in advanced nursing practice. Nursing educators and leaders can partner with academics to develop advanced practice-specific education for pre-master nurses with the aptitude and interest in pursuing this track.

2.
Appl Microbiol Biotechnol ; 104(18): 7867-7878, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32734388

ABSTRACT

Pernisine is a subtilisin-like serine proteinase secreted by the hyperthermophilic archaeon Aeropyrum pernix. The significant properties of this proteinase are remarkable stability and ability to degrade the infectious prion proteins. Here we show the production of pernisine in the periplasm of Escherichia coli. This strategy prevented the aggregation of pernisine in the cytoplasm and increased the purity of the isolated pernisine. The thermostability of this recombinant pernisine was significantly increased compared with previous studies. In addition, several truncated pernisine variants were constructed and expressed in E. coli to identify the minimally active domain. The catalytic domain of pernisine consists of the αẞα structurally similar core flanked by the N-terminal and C-terminal outer regions. The deletion of the C-terminal α helix did not affect the pernisine activity at 90 °C. However, the complete deletion of the C-terminal outer region resulted in loss of proteolytic activity. The pernisine variant, in which the N-terminal outer region was deleted, had a reduced activity at 90 °C. These results underline the importance of the Ca2+ binding sites predicted in these outer regions for stability and activity of pernisine. KEY POINTS: • Aggregation of produced pernisine was prevented by translocation into periplasm. • Thermostability of mature pernisine was increased. • The outer regions of the catalytic core are required for pernisine thermostability.


Subject(s)
Aeropyrum , Escherichia coli , Binding Sites , Endopeptidases , Escherichia coli/genetics , Periplasm
3.
Nat Genet ; 51(9): 1349-1355, 2019 09.
Article in English | MEDLINE | ID: mdl-31477931

ABSTRACT

The vast majority of human mutations have minor allele frequencies under 1%, with the plurality observed only once (that is, 'singletons'). While Mendelian diseases are predominantly caused by rare alleles, their cumulative contribution to complex phenotypes is largely unknown. We develop and rigorously validate an approach to jointly estimate the contribution of all alleles, including singletons, to phenotypic variation. We apply our approach to transcriptional regulation, an intermediate between genetic variation and complex disease. Using whole-genome DNA and lymphoblastoid cell line RNA sequencing data from 360 European individuals, we conservatively estimate that singletons contribute approximately 25% of cis heritability across genes (dwarfing the contributions of other frequencies). The majority (approximately 76%) of singleton heritability derives from ultrarare variants absent from thousands of additional samples. We develop an inference procedure to demonstrate that our results are consistent with pervasive purifying selection shaping the regulatory architecture of most human genes.


Subject(s)
Gene Expression Regulation , Genome, Human , Genome-Wide Association Study/methods , Multifactorial Inheritance , Polymorphism, Single Nucleotide , Transcriptome , Europe , High-Throughput Nucleotide Sequencing , Humans , Phenotype
4.
Am J Med Qual ; 33(1): 21-29, 2018.
Article in English | MEDLINE | ID: mdl-28482161

ABSTRACT

Central line-associated bloodstream infections (CLABSIs) cause major patient harm, preventable through attention to line care best practice standards. The objective was to determine if a digital self-assessment application (CLABSI App), bundling line care best practices with social gamification and in-context microlearning, could engage nurses in CLABSI prevention. Nurses caring for children with indwelling central venous catheters in 3 high-risk units were eligible to participate. All other units served as controls. The intervention was a 12-month nonrandomized quality improvement study of CLABSI App implementation with interunit competitions. Compared to the preceding year, the intervention group (9886 line days) CLABSI rate decreased by 48% ( P = .03). Controls (7879 line days) did not change significantly. In all, 105 unique intervention group nurses completed 673 self-assessments. Competitions were associated with increased engagement as measured by self-assessments and unique participants. This model could be extended to other health care-associated infections, and more broadly to process improvement within and across health care systems.


Subject(s)
Bacteremia/prevention & control , Catheter-Related Infections/prevention & control , Inservice Training/methods , Mobile Applications , Nursing Staff, Hospital/education , Quality Improvement/organization & administration , Central Venous Catheters , Hospitals, Pediatric/organization & administration , Humans , Patient Care Bundles , Prospective Studies , Self-Assessment , Work Engagement
5.
Small ; 13(43)2017 11.
Article in English | MEDLINE | ID: mdl-28902980

ABSTRACT

Highly reliable detection, imaging, and monitoring of reactive oxygen species (ROS) are critical for understanding and studying the biological roles and pathogenesis of ROS. This study describes the design and synthesis of myoglobin and polydopamine-engineered surface-enhanced Raman scattering (MP-SERS) nanoprobes with strong, tunable SERS signals that allow for specifically detecting and imaging ROS sensitively and quantitatively. The study shows that a polydopamine nanolayer can facilitate the modification of Raman-active myoglobins and satellite Au nanoparticles (s-AuNPs) to a plasmonic core AuNP (c-AuNP) in a controllable manner and the generation of plasmonically coupled hot spots between a c-AuNP and s-AuNPs that can induce strong SERS signals. The six-coordinated Fe(III)-OH2 of myoglobins in plasmonic hotspots is reacted with ROS (H2 O2 , •OH, and O2- ) to form Fe(IV)O. The characteristic Raman peaks of Fe(IV)O from the Fe-porphyrin is used to analyze and quantify ROS. This chemistry allows for these probes to detect ROS in solution and image ROS in cells in a highly designable, specific, and sensitive manner. This work shows that these MP-SERS probes allow for detecting and imaging ROS to differentiate cancerous cells from noncancerous cells. Importantly, for the first time, SERS-based monitoring of the autophagy process in living cells under starvation conditions is validated.


Subject(s)
Indoles/chemistry , Metal Nanoparticles/chemistry , Myoglobin/metabolism , Polymers/chemistry , Reactive Oxygen Species/metabolism , Spectrum Analysis, Raman , Autophagy , Cell Survival , Gold/chemistry , HeLa Cells , Humans , Lysosomes/metabolism , Metal Nanoparticles/ultrastructure
6.
Biophys J ; 111(5): 1044-52, 2016 Sep 06.
Article in English | MEDLINE | ID: mdl-27602732

ABSTRACT

Mechanotransduction at E-cadherin junctions has been postulated to be mediated in part by a force-dependent conformational activation of α-catenin. Activation of α-catenin allows it to interact with vinculin in addition to F-actin, resulting in a strengthening of junctions. Here, using E-cadherin adhesions reconstituted on synthetic, nanopatterned membranes, we show that activation of α-catenin is dependent on E-cadherin clustering, and is sustained in the absence of mechanical force or association with F-actin or vinculin. Adhesions were formed by filopodia-mediated nucleation and micron-scale assembly of E-cadherin clusters, which could be distinguished as either peripheral or central assemblies depending on their relative location at the cell-bilayer adhesion. Whereas F-actin, vinculin, and phosphorylated myosin light chain associated only with the peripheral assemblies, activated α-catenin was present in both peripheral and central assemblies, and persisted in the central assemblies in the absence of actomyosin tension. Impeding filopodia-mediated nucleation and micron-scale assembly of E-cadherin adhesion complexes by confining the movement of bilayer-bound E-cadherin on nanopatterned substrates reduced the levels of activated α-catenin. Taken together, these results indicate that although the initial activation of α-catenin requires micron-scale clustering that may allow the development of mechanical forces, sustained force is not required for maintaining α-catenin in the active state.


Subject(s)
Cadherins/metabolism , Cell Adhesion/physiology , Mechanotransduction, Cellular/physiology , alpha Catenin/metabolism , Actins/chemistry , Actins/metabolism , Antigens, CD , Cadherins/chemistry , Cadherins/genetics , Cell Adhesion/drug effects , Cell Culture Techniques , Cell Line, Tumor , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Humans , Lipid Bilayers/chemistry , Mechanotransduction, Cellular/drug effects , Microscopy, Confocal , Microscopy, Fluorescence , Myosin Light Chains/chemistry , Myosin Light Chains/metabolism , Stress, Mechanical , Vinculin/chemistry , Vinculin/metabolism , alpha Catenin/chemistry , rho-Associated Kinases/antagonists & inhibitors , rho-Associated Kinases/chemistry , rho-Associated Kinases/metabolism
7.
Proc Natl Acad Sci U S A ; 112(35): 10932-7, 2015 Sep 01.
Article in English | MEDLINE | ID: mdl-26290581

ABSTRACT

Epithelial (E)-cadherin-mediated cell-cell junctions play important roles in the development and maintenance of tissue structure in multicellular organisms. E-cadherin adhesion is thus a key element of the cellular microenvironment that provides both mechanical and biochemical signaling inputs. Here, we report in vitro reconstitution of junction-like structures between native E-cadherin in living cells and the extracellular domain of E-cadherin (E-cad-ECD) in a supported membrane. Junction formation in this hybrid live cell-supported membrane configuration requires both active processes within the living cell and a supported membrane with low E-cad-ECD mobility. The hybrid junctions recruit α-catenin and exhibit remodeled cortical actin. Observations suggest that the initial stages of junction formation in this hybrid system depend on the trans but not the cis interactions between E-cadherin molecules, and proceed via a nucleation process in which protrusion and retraction of filopodia play a key role.


Subject(s)
Cadherins/metabolism , Intercellular Junctions , Biophysics , Cell Line , Cytoskeleton/metabolism , Humans , Kinetics , Lipid Bilayers , Signal Transduction
8.
Nanoscale ; 7(1): 66-76, 2015 Jan 07.
Article in English | MEDLINE | ID: mdl-25408237

ABSTRACT

Nanoparticle tethering to lipid bilayers enables the observation of hundreds of diffusing particles that are confined within a single field of view. A wide variety of materials ranging from plasmonic metals to soft matter can be stably tethered to the surface of a fluid bilayer by covalent or non-covalent means. The controlled environment of this experimental platform allows direct control over surface compositions and accurate tracking of nanoparticle interactions. This minireview will cover studies that use bilayer-tethered nanoparticles to investigate physical properties related to lipid mobility, biomolecule sensing, and surface interactions, as well as experiments to reversibly manipulate tethered nanoparticles by electric fields.


Subject(s)
Biopolymers/chemistry , Lipid Bilayers/chemistry , Membrane Fluidity , Nanoparticles/chemistry , Nanoparticles/ultrastructure , Adsorption
9.
Cell Rep ; 5(5): 1456-68, 2013 Dec 12.
Article in English | MEDLINE | ID: mdl-24290759

ABSTRACT

Matrix-activated integrins can form different adhesion structures. We report that nontransformed fibroblasts develop podosome-like adhesions when spread on fluid Arg-Gly-Asp peptide (RGD)-lipid surfaces, whereas they habitually form focal adhesions on rigid RGD glass surfaces. Similar to classic macrophage podosomes, the podosome-like adhesions are protrusive and characterized by doughnut-shaped RGD rings that surround characteristic core components including F-actin, N-WASP, and Arp2/Arp3. Furthermore, there are 18 podosome markers in these adhesions, though they lack matrix metalloproteinases that characterize invadopodia and podosomes of Src-transformed cells. When nontransformed cells develop force on integrin-RGD clusters by pulling RGD lipids to prefabricated rigid barriers (metal lines spaced by 1-2 µm), these podosomes fail to form and instead form focal adhesions. The formation of podosomes on fluid surfaces is mediated by local activation of phosphoinositide 3-kinase (PI3K) and the production of phosphatidylinositol-(3,4,5)-triphosphate (PIP3) in a FAK/PYK2-dependent manner. Enrichment of PIP3 precedes N-WASP activation and the recruitment of RhoA-GAP ARAP3. We propose that adhesion structures can be modulated by traction force development and that production of PIP3 stimulates podosome formation and subsequent RhoA downregulation in the absence of traction force.


Subject(s)
Extracellular Matrix/metabolism , Focal Adhesions/metabolism , Integrins/metabolism , Oligopeptides/pharmacology , Pseudopodia/metabolism , Actin-Related Protein 2-3 Complex/metabolism , Actins/metabolism , Animals , Cell Adhesion , Cell Line, Tumor , Fibroblasts/drug effects , Fibroblasts/metabolism , Fibroblasts/physiology , Focal Adhesion Kinase 1/metabolism , Focal Adhesion Kinase 2/metabolism , Focal Adhesions/drug effects , GTPase-Activating Proteins/metabolism , Humans , Matrix Metalloproteinases/metabolism , Phosphatidylinositol 3-Kinases/metabolism , Phosphatidylinositol Phosphates/metabolism , Pseudopodia/drug effects , Rats , Wiskott-Aldrich Syndrome Protein, Neuronal/metabolism
10.
PeerJ ; 1: e5, 2013.
Article in English | MEDLINE | ID: mdl-23638387

ABSTRACT

Fragments of prostatic acid phosphatase (PAP248-286) in human semen dramatically increase HIV infection efficiency by increasing virus adhesion to target cells. PAP248-286 only enhances HIV infection in the form of amyloid aggregates termed SEVI (Semen Enhancer of Viral Infection), however monomeric PAP248-286 aggregates very slowly in isolation. It has therefore been suggested that SEVI fiber formation in vivo may be promoted by exogenous factors. We show here that a bacterially-produced extracellular amyloid (curli or Csg) acts as a catalytic agent for SEVI formation from PAP248-286 at low concentrations in vitro, producing fibers that retain the ability to enhance HIV (Human Immunodeficiency Virus) infection. Kinetic analysis of the cross-seeding effect shows an unusual pattern. Cross-seeding PAP248-286 with curli only moderately affects the nucleation rate while significantly enhancing the growth of fibers from existing nuclei. This pattern is in contrast to most previous observations of cross-seeding, which show cross-seeding partially bypasses the nucleation step but has little effect on fiber elongation. Seeding other amyloidogenic proteins (IAPP (islet amyloid polypeptide) and Aß1-40) with curli showed varied results. Curli cross-seeding decreased the lag-time of IAPP amyloid formation but strongly inhibited IAPP elongation. Curli cross-seeding exerted a complicated concentration dependent effect on Aß1-40 fibrillogenesis kinetics. Combined, these results suggest that the interaction of amyloidogenic proteins with preformed fibers of a different type can take a variety of forms and is not limited to epitaxial nucleation between proteins of similar sequence. The ability of curli fibers to interact with proteins of dissimilar sequences suggests cross-seeding may be a more general phenomenon than previously supposed.

11.
Biochemistry ; 51(41): 8154-62, 2012 Oct 16.
Article in English | MEDLINE | ID: mdl-22998665

ABSTRACT

Amyloid formation, a complex process involving many intermediate states, is proposed to be the driving force for amyloid-related toxicity in common degenerative diseases. Unfortunately, the details of this process have been obscured by the limitations in the methods that can follow this reaction in real time. We show that alternative pathways of aggregation can be distinguished by using (19)F nuclear magnetic resonance (NMR) to monitor monomer consumption along with complementary measurements of fibrillogenesis. The utility of this technique is demonstrated by tracking amyloid formation in the diabetes-related islet amyloid polypeptide (IAPP). Using this technique, we show IAPP fibrillizes without an appreciable buildup of nonfibrillar intermediates, in contrast to the well-studied Aß and α-synuclein proteins. To further develop the usage of (19)F NMR, we have tracked the influence of the polyphenolic amyloid inhibitor epigallocatechin gallate (EGCG) on the aggregation pathway. Polyphenols have been shown to strongly inhibit amyloid formation in many systems. However, spectroscopic measurements of amyloid inhibition by these compounds can be severely compromised by background signals and competitive binding with extrinsic probes. Using (19)F NMR, we show that thioflavin T strongly competes with EGCG for binding sites on IAPP fibers. By comparing the rates of monomer consumption and fiber formation, we are able to show that EGCG stabilizes nonfibrillar large aggregates during fibrillogenesis.


Subject(s)
Islet Amyloid Polypeptide/chemistry , Nuclear Magnetic Resonance, Biomolecular/methods , Benzothiazoles , Catechin/analogs & derivatives , Catechin/metabolism , Circular Dichroism , Fluorine , Humans , Islet Amyloid Polypeptide/metabolism , Kinetics , Protein Binding , Spectrometry, Fluorescence , Thiazoles/metabolism
12.
J Phys Chem B ; 116(11): 3650-8, 2012 Mar 22.
Article in English | MEDLINE | ID: mdl-22360607

ABSTRACT

Recently, a 39 amino acid peptide fragment from prostatic acid phosphatase has been isolated from seminal fluid that can enhance infectivity of the HIV virus by up to 4-5 orders of magnitude. PAP(248-286) is effective in enhancing HIV infectivity only when it is aggregated into amyloid fibers termed SEVI. The polyphenol EGCG (epigallocatechin-3-gallate) has been shown to disrupt both SEVI formation and HIV promotion by SEVI, but the mechanism by which it accomplishes this task is unknown. Here, we show that EGCG interacts specifically with the side chains of monomeric PAP(248-286) in two regions (K251-R257 and N269-I277) of primarily charged residues, particularly lysine. The specificity of interaction to these two sites is contrary to previous studies on the interaction of EGCG with other amyloidogenic proteins, which showed the nonspecific interaction of EGCG with exposed backbone sites of unfolded amyloidogenic proteins. This interaction is specific to EGCG as the related gallocatechin (GC) molecule, which shows greatly decreased antiamyloid activity, exhibits minimal interaction with monomeric PAP(248-286). The EGCG binding was shown to occur in two steps, with the initial formation of a weakly bound complex followed by a pH dependent formation of a tightly bound complex. Experiments in which the lysine residues of PAP(248-286) have been chemically modified suggest the tightly bound complex is created by Schiff-base formation with lysine residues. The results of this study could aid in the development of small molecule inhibitors of SEVI and other amyloid proteins.


Subject(s)
Catechin/analogs & derivatives , Protein Tyrosine Phosphatases/metabolism , Acid Phosphatase , Amino Acid Sequence , Catechin/chemistry , Catechin/metabolism , HIV Infections/metabolism , Humans , Hydrogen-Ion Concentration , Kinetics , Microscopy, Fluorescence , Molecular Sequence Data , Protein Binding , Protein Multimerization , Protein Tyrosine Phosphatases/chemistry , Serum Amyloid A Protein/chemistry , Serum Amyloid A Protein/metabolism
13.
Biophys J ; 100(3): 685-692, 2011 Feb 02.
Article in English | MEDLINE | ID: mdl-21281583

ABSTRACT

Type II diabetes, in its late stages, is often associated with the formation of extracellular islet amyloid deposits composed of islet amyloid polypeptide (IAPP or amylin). IAPP is stored before secretion at millimolar concentrations within secretory granules inside the ß-cells. Of interest, at these same concentrations in vitro, IAPP rapidly aggregates and forms fibrils, yet within secretory granules of healthy individuals, IAPP does not fibrillize. Insulin is also stored within the secretory granules before secretion, and has been shown in vitro to inhibit IAPP fibril formation. Because of insulin's inhibitory effect on IAPP fibrillization, it has been suggested that insulin may also inhibit IAPP-mediated permeabilization of the ß-cell plasma membrane in vivo. We show that although insulin is effective at preventing fiber-dependent membrane disruption, it is not effective at stopping the initial phase of membrane disruption before fibrillogenesis, and does not prevent the formation of small IAPP oligomers on the membrane. These results suggest that insulin has a more complicated role in inhibiting IAPP fibrillogenesis, and that other factors, such as the low pH of the secretory granule, may also play a role.


Subject(s)
Cell Membrane/drug effects , Insulin/pharmacology , Islet Amyloid Polypeptide/pharmacology , Cell Membrane Permeability/drug effects , Cross-Linking Reagents/pharmacology , Humans , Islet Amyloid Polypeptide/chemistry , Kinetics , Protein Structure, Quaternary , Solutions , Time Factors , Unilamellar Liposomes/metabolism
14.
J Am Chem Soc ; 132(26): 8973-83, 2010 Jul 07.
Article in English | MEDLINE | ID: mdl-20536124

ABSTRACT

Human Islet Amyloid Polypeptide (hIAPP) is a highly amyloidogenic protein found in islet cells of patients with type II diabetes. Because hIAPP is highly toxic to beta-cells under certain conditions, it has been proposed that hIAPP is linked to the loss of beta-cells and insulin secretion in type II diabetics. One of the interesting questions surrounding this peptide is how the toxic and aggregation prone hIAPP peptide can be maintained in a safe state at the high concentrations that are found in the secretory granule where it is stored. We show here zinc, which is found at millimolar concentrations in the secretory granule, significantly inhibits hIAPP amyloid fibrillogenesis at concentrations similar to those found in the extracellular environment. Zinc has a dual effect on hIAPP fibrillogenesis: it increases the lag-time for fiber formation and decreases the rate of addition of hIAPP to existing fibers at lower concentrations, while having the opposite effect at higher concentrations. Experiments at an acidic pH which partially neutralizes the change in charge upon zinc binding show inhibition is largely due to an electrostatic effect at His18. High-resolution structures of hIAPP determined from NMR experiments confirm zinc binding to His18 and indicate zinc induces localized disruption of the secondary structure of IAPP in the vicinity of His18 of a putative helical intermediate of IAPP. The inhibition of the formation of aggregated and toxic forms of hIAPP by zinc provides a possible mechanism between the recent discovery of linkage between deleterious mutations in the SLC30A8 zinc transporter, which transports zinc into the secretory granule, and type II diabetes.


Subject(s)
Amyloid/chemistry , Amyloid/metabolism , Protein Multimerization/drug effects , Zinc/pharmacology , Amino Acid Sequence , Dose-Response Relationship, Drug , Histidine/metabolism , Humans , Hydrogen-Ion Concentration , Islet Amyloid Polypeptide , Kinetics , Ligands , Models, Molecular , Molecular Sequence Data , Protein Structure, Quaternary , Protein Structure, Secondary
15.
Biophys J ; 97(9): 2474-83, 2009 Nov 04.
Article in English | MEDLINE | ID: mdl-19883590

ABSTRACT

In previous in vivo studies, amyloid fibers formed from a peptide ubiquitous in human seminal fluid (semen-derived enhancer of viral infection (SEVI)) were found to dramatically enhance the infectivity of the HIV virus (3-5 orders of magnitude by some measures). To complement those studies, we performed in vitro assays of PAP(248-286), the most active precursor to SEVI, and other polycationic polymers to investigate the physical mechanisms by which the PAP(248-286) promotes the interaction with lipid bilayers. At acidic (but not at neutral) pH, freshly dissolved PAP(248-286) catalyzes the formation of large lipid flocculates in a variety of membrane compositions, which may be linked to the promotion of convective transport in the vaginal environment rather than transport by a random Brownian motion. Furthermore, PAP(248-286) is itself fusiogenic and weakens the integrity of the membrane in such a way that may promote fusion by the HIV gp41 protein. An alpha-helical conformation of PAP(248-286), lying parallel to the membrane surface, is implicated in promoting bridging interactions between membranes by the screening of the electrostatic repulsion that occurs when two membranes are brought into close contact. This suggests that nonspecific binding of monomeric or small oligomeric forms of SEVI in a helical conformation to lipid membranes may be an additional mechanism by which SEVI enhances the infectivity of the HIV virus.


Subject(s)
HIV Envelope Protein gp41/chemistry , HIV Infections/metabolism , Peptides/chemistry , Semen/virology , Amino Acid Sequence , Catalysis , Female , HIV/chemistry , Humans , Hydrogen-Ion Concentration , Lipid Bilayers/chemistry , Lipids/chemistry , Male , Molecular Conformation , Molecular Sequence Data , Polymers/chemistry , Protein Conformation , Protein Structure, Secondary , Sequence Homology, Amino Acid , Vagina/metabolism
16.
J Am Chem Soc ; 131(23): 8252-61, 2009 Jun 17.
Article in English | MEDLINE | ID: mdl-19456151

ABSTRACT

Islet amyloid polypeptide (IAPP or amylin) is a 37-residue peptide hormone associated with glucose metabolism that is cosecreted with insulin by beta-cells in the pancreas. Since human IAPP is a highly amyloidogenic peptide, it has been suggested that the formation of IAPP amyloid fibers is responsible for the death of beta-cells during the early stages of type II diabetes. It has been hypothesized that transient membrane-bound alpha-helical structures of human IAPP are precursors to the formation of these amyloid deposits. On the other hand, rat IAPP forms transient alpha-helical structures but does not progress further to form amyloid fibrils. To understand the nature of this intermediate state and the difference in toxicity between the rat and human versions of IAPP, we have solved the high-resolution structure of rat IAPP in the membrane-mimicking detergent micelles composed of dodecylphosphocholine. The structure is characterized by a helical region spanning the residues A5 to S23 and a disordered C-terminus. A distortion in the helix is seen at R18 and S19 that may be involved in receptor binding. Paramagnetic quenching NMR experiments indicate that rat IAPP is bound on the surface of the micelle, in agreement with other nontoxic forms of IAPP. A comparison to the detergent-bound structures of other IAPP variants indicates that the N-terminal region may play a crucial role in the self-association and toxicity of IAPP by controlling access to the putative dimerization interface on the hydrophobic face of the amphipathic helix.


Subject(s)
Amyloid/chemistry , Amino Acid Sequence , Animals , Islet Amyloid Polypeptide , Membranes/chemistry , Micelles , Molecular Sequence Data , Nuclear Magnetic Resonance, Biomolecular , Phosphorylcholine/analogs & derivatives , Phosphorylcholine/chemistry , Protein Structure, Secondary , Rats , Solutions
17.
Biochemistry ; 47(47): 12357-64, 2008 Nov 25.
Article in English | MEDLINE | ID: mdl-18973346

ABSTRACT

Endosulfine-alpha (ENSA) is a 121-residue cAMP-regulated phosphoprotein, originally identified as an endogenous regulator of ATP-sensitive potassium channels. ENSA has been implicated in the regulation of insulin secretion, and expression of ENSA is decreased in brains of both Alzheimer's disease (AD) and Down's syndrome patients. We recently described membrane-dependent interactions between ENSA and the Parkinson's disease associated protein alpha-synuclein. Here we characterize the conformational change in ENSA that occurs upon binding to membranes. Secondary chemical shift analysis demonstrates formation of four helices in the lipid-bound state that are not present in the absence of lipid. The helical structure is maintained in several different lipid mimetics (sodium dodecyl sulfate, dodecyl phosphocholine, lyso 1-palmitoyl phosphatidylglycerol, and phospholipid vesicles). Introduction of a mutation (S109E) to mimic PKA phosphorylation of ENSA leads to a perturbation of the fourth helix and disrupts the interaction with alpha-synuclein. These data establish ENSA as an intrinsically unstructured protein that adopts a stable structure upon membrane binding, properties it shares with its binding partner alpha-synuclein.


Subject(s)
Cell Membrane/metabolism , Peptides/chemistry , Peptides/metabolism , Phosphoproteins/chemistry , Phosphoproteins/metabolism , Protein Folding , Biomimetic Materials/metabolism , Biomimetic Materials/pharmacology , Chromatography, Gel , Circular Dichroism , Cyclic AMP-Dependent Protein Kinases/metabolism , Glycolipids/metabolism , Glycolipids/pharmacology , Inositol Phosphates/metabolism , Inositol Phosphates/pharmacology , Intercellular Signaling Peptides and Proteins , Magnetic Resonance Spectroscopy , Micelles , Phospholipids/metabolism , Phospholipids/pharmacology , Phosphorylation , Protein Binding/drug effects , Protein Structure, Secondary/drug effects , Sodium Dodecyl Sulfate/metabolism , Sodium Dodecyl Sulfate/pharmacology , alpha-Synuclein/metabolism
18.
Biochemistry ; 47(48): 12680-8, 2008 Dec 02.
Article in English | MEDLINE | ID: mdl-18989933

ABSTRACT

Islet amyloid polypeptide (IAPP or amylin) is a 37-residue peptide secreted with insulin by beta-cells in the islets of Langerhans. The aggregation of the peptide into either amyloid fibers or small soluble oligomers has been implicated in the death of beta-cells during type 2 diabetes through disruption of the cellular membrane. The actual form of the peptide responsible for beta-cell death has been a subject of controversy. Previous research has indicated that the N-terminal region of the peptide (residues 1-19) is primarily responsible for the membrane-disrupting effect of the hIAPP peptide and induces membrane disruption to a similar extent as the full-length peptide without forming amyloid fibers when bound to the membrane. The rat version of the peptide, which is both noncytotoxic and nonamyloidogenic, differs from the human peptide by only one amino acid residue: Arg18 in the rat version while His18 in the human version. To elucidate the effect of this difference, we have measured in this study the effects of the rat and human versions of IAPP(1-19) on islet cells and model membranes. Fluorescence microscopy shows a rapid increase in intracellular calcium levels of islet cells after the addition of hIAPP(1-19), indicating disruption of the cellular membrane, while the rat version of the IAPP(1-19) peptide is significantly less effective. Circular dichroism experiments and dye leakage assays on model liposomes show that rIAPP(1-19) is deficient in binding to and disrupting lipid membranes at low but not at high peptide to lipid ratios, indicating that the ability of rIAPP(1-19) to form small aggregates necessary for membrane binding and disruption is significantly less than hIAPP(1-19). At pH 6.0, where H18 is likely to be protonated, hIAPP(1-19) resembles rIAPP(1-19) in its ability to cause membrane disruption. Differential scanning calorimetry suggests a different mode of binding to the membrane for rIAPP(1-19) compared to hIAPP(1-19). Human IAPP(1-19) has a minimal effect on the phase transition of lipid vesicles, suggesting a membrane orientation of the peptide in which the mobility of the acyl chains of the membrane is relatively unaffected. Rat IAPP(1-19), however, has a strong effect on the phase transition of lipid vesicles at low concentrations, suggesting that the peptide does not easily insert into the membrane after binding to the surface. Our results indicate that the modulation of the peptide orientation in the membrane by His18 plays a key role in the toxicity of nonamyloidogenic forms of hIAPP.


Subject(s)
Amyloid/genetics , Amyloid/toxicity , Mutation , Amino Acid Sequence , Amyloid/chemistry , Amyloid/metabolism , Animals , Calorimetry, Differential Scanning , Cell Membrane/drug effects , Cell Membrane/metabolism , Cell Membrane Permeability/drug effects , Humans , Islet Amyloid Polypeptide , Islets of Langerhans/cytology , Islets of Langerhans/drug effects , Molecular Sequence Data , Phosphatidylglycerols/metabolism , Rats
19.
J Phys Chem B ; 111(47): 13353-6, 2007 Nov 29.
Article in English | MEDLINE | ID: mdl-17985869

ABSTRACT

Protein aggregation is implicated in the etiology of numerous neurodegenerative diseases. An understanding of aggregation mechanisms is enhanced by atomic-resolution structural information, of which relatively little is currently available. Lewy bodies, the pathological hallmark of Parkinson's disease, contain large quantities of fibrillar alpha-synuclein (AS). Here we present solid-state NMR spectroscopy studies of dried AS fibrils. The spectra have high resolution and sensitivity, and the site-resolved chemical shifts agree very well with those previously observed for hydrated fibrils. The conserved chemical shifts indicate that bulk water is nonessential to the fibril core structure. Moreover, the sample preparation procedure yields major improvements in spectral sensitivity, without compromising spectral resolution. This advance will greatly assist the atomic-resolution structural analysis of AS fibrils.


Subject(s)
Amyloid/chemistry , Magnetic Resonance Spectroscopy , Water/analysis , alpha-Synuclein/chemistry , Amyloid/metabolism , Desiccation , Water/chemistry , alpha-Synuclein/metabolism
20.
J Biol Chem ; 282(47): 34555-67, 2007 Nov 23.
Article in English | MEDLINE | ID: mdl-17893145

ABSTRACT

Alpha-synuclein (AS) is an intrinsically unstructured protein in aqueous solution but is capable of forming beta-sheet-rich fibrils that accumulate as intracytoplasmic inclusions in Parkinson disease and certain other neurological disorders. However, AS binding to phospholipid membranes leads to a distinct change in protein conformation, stabilizing an extended amphipathic alpha-helical domain reminiscent of the exchangeable apolipoproteins. To better understand the significance of this conformational change, we devised a novel bacteriophage display screen to identify protein binding partners of helical AS and have identified 20 proteins with roles in diverse cellular processes related to membrane trafficking, ion channel modulation, redox metabolism, and gene regulation. To verify that the screen identifies proteins with specificity for helical AS, we further characterized one of these candidates, endosulfine alpha (ENSA), a small cAMP-regulated phosphoprotein implicated in the regulation of insulin secretion but also expressed abundantly in the brain. We used solution NMR to probe the interaction between ENSA and AS on the surface of SDS micelles. Chemical shift perturbation mapping experiments indicate that ENSA interacts specifically with residues in the N-terminal helical domain of AS in the presence of SDS but not in aqueous buffer lacking SDS. The ENSA-related protein ARPP-19 (cAMP-regulated phosphoprotein 19) also displays specific interactions with helical AS. These results confirm that the helical N terminus of AS can mediate specific interactions with other proteins and suggest that membrane binding may regulate the physiological activity of AS in vivo.


Subject(s)
Nerve Tissue Proteins/genetics , Peptide Library , Peptides/genetics , Phosphoproteins/genetics , alpha-Synuclein/genetics , Cell Membrane/genetics , Cell Membrane/metabolism , Humans , Intercellular Signaling Peptides and Proteins , Intranuclear Inclusion Bodies/chemistry , Intranuclear Inclusion Bodies/genetics , Intranuclear Inclusion Bodies/metabolism , Nerve Tissue Proteins/chemistry , Nerve Tissue Proteins/metabolism , Nuclear Magnetic Resonance, Biomolecular , Parkinson Disease/genetics , Parkinson Disease/metabolism , Peptides/chemistry , Phospholipids/genetics , Phospholipids/metabolism , Phosphoproteins/chemistry , Phosphoproteins/metabolism , Protein Binding , Protein Structure, Secondary , Protein Structure, Tertiary , alpha-Synuclein/chemistry , alpha-Synuclein/metabolism
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