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1.
Neurotoxicology ; 81: 1-10, 2020 12.
Article in English | MEDLINE | ID: mdl-32735808

ABSTRACT

Developmental methylmercury (MeHg) exposure can have lasting consequences on neural development and motor function across the lifespan. Recent evidence for MeHg targeting of myogenic pathways has drawn attention to the possibility that developing skeletal muscle plays a role in the motor deficits stemming from early life MeHg exposure. In this study we examined a potential role for muscle in influencing MeHg developmental toxicity in offspring of female mice exposed to MeHg via drinking water. Dams had access to 0, 0.5 or 5.0 ppm MeHg chloride in drinking water from two weeks prior to mating through weaning. Blood, brain and muscle tissue was harvested from dams at weaning and pups at postnatal days (PND) 6, 21 and 60 for analysis of total Hg. Muscle tissue sections were examined with histological stains. Behavioral testing of offspring was conducted at PND 60 and included locomotor activity, inverted screen, grip strength and rotarod tests to assess motor function. Total Hg (tHg) levels in dam muscles at weaning were 1.7-3-fold higher than Hg levels in blood or brain. In PND6 male and female pups, muscle and brain tHg levels were 2 to 4-fold higher than blood tHg. Brain tHg levels decreased more rapidly than muscle tHg levels between PND 6 and 21. Premised on modeling of growth dilution, brain tissue demonstrated an elimination of tHg while muscle tissue exhibited a net uptake of tHg between PND 6 and 21. Despite overall elevated Hg levels in developing muscle, no gross morphological or cytological phenotypes were observed in muscle at PND 60. At the higher MeHg dose, grip strength was reduced in both females and males at PND 60, whereas only male specific deficits were observed in locomotor activity and inverted screen tests with marginally significant deficits on rotarod. These findings highlight a potential role for developing skeletal muscle in mediating the neuromuscular insult of early life MeHg exposure.


Subject(s)
Mercury Poisoning, Nervous System/physiopathology , Methylmercury Compounds , Motor Activity , Muscle, Skeletal/growth & development , Prenatal Exposure Delayed Effects , Age Factors , Animals , Body Burden , Brain/metabolism , Disease Models, Animal , Female , Gestational Age , Hand Strength , Locomotion , Male , Maternal Exposure , Mercury Poisoning, Nervous System/etiology , Mercury Poisoning, Nervous System/metabolism , Methylmercury Compounds/blood , Mice, Inbred C57BL , Muscle, Skeletal/metabolism , Pregnancy , Rotarod Performance Test , Sex Factors
2.
Environ Health Perspect ; 128(2): 27001, 2020 02.
Article in English | MEDLINE | ID: mdl-32073883

ABSTRACT

BACKGROUND: Lead (Pb) exposure and prenatal stress (PS) during development are co-occurring risk factors with shared biological substrates. PS has been associated with transgenerational passage of altered behavioral phenotypes, whereas the transgenerational behavioral or biochemical consequences of Pb exposure, and modification of any such effects by PS, is unknown. OBJECTIVES: The present study sought to determine whether Pb, PS, or combined Pb and PS exposures produced adverse transgenerational consequences on brain and behavior. METHODS: Maternal Pb and PS exposures were carried out in F0 mice. Outside breeders were used at each subsequent breeding, producing four F1-F2 lineages: [F1 female-F2 female (FF), FM (male), MF, and MM]. F3 offspring were generated from each of these lineages and examined for outcomes previously found to be altered by Pb, PS, or combined Pb and PS in F1 offspring: behavioral performance [fixed-interval (FI) schedule of food reward, locomotor activity, and anxiety-like behavior], dopamine function [striatal expression of tyrosine hydroxylase (Th)], glucocorticoid receptor (GR) and plasma corticosterone, as well as brain-derived neurotrophic factor (BDNF) and total percent DNA methylation of Th and Bdnf genes in the frontal cortex and hippocampus. RESULTS: Maternal F0 Pb exposure produced runting in F3 offspring. Considered across lineages, F3 females exhibited Pb-related alterations in behavior, striatal BDNF levels, frontal cortical Th total percentage DNA methylation levels and serum corticosterone levels, whereas F3 males showed Pb- and PS-related alterations in behavior and total percent DNA methylation of hippocampal Bdnf. However, numerous lineage-specific effects were observed, most of greater magnitude than those observed across lineages, with outcomes differing by F3 sex. DISCUSSION: These findings support the possibility that exposures of previous generations to Pb or PS may influence the brain and behavior of future generations. Observed changes were sex-dependent, with F3 females showing multiple changes through Pb-exposed lineages. Lineage effects may occur through maternal responses to pregnancy, altered maternal behavior, epigenetic modifications, or a combination of mechanisms, but they have significant public health ramifications regardless of mechanism. https://doi.org/10.1289/EHP4977.


Subject(s)
Environmental Pollutants/blood , Lead/blood , Animals , Brain/physiopathology , Environmental Pollutants/toxicity , Female , Hippocampus/metabolism , Lead/toxicity , Male , Maternal Exposure , Mice , Pregnancy , Sex Factors , Stress, Physiological
3.
Part Fibre Toxicol ; 16(1): 10, 2019 02 18.
Article in English | MEDLINE | ID: mdl-30777081

ABSTRACT

BACKGROUND: Recent epidemiological studies indicate early-life exposure to air pollution is associated with adverse neurodevelopmental outcomes. Previous studies investigating neonatal exposure to ambient fine and ultrafine particles have shown sex specific inflammation-linked pathological changes and protracted learning deficits. A potential contributor to the adverse phenotypes from developmental exposure to particulate matter observed in previous studies may be elemental carbon, a well-known contributor to pollution particulate. The present study is an evaluation of pathological and protracted behavioral alterations in adulthood following subacute neonatal exposure to ultrafine elemental carbon. C57BL/6J mice were exposed to ultrafine elemental carbon at 50 µg/m3 from postnatal days 4-7 and 10-13 for 4 h/day. Behavioral outcomes measured were locomotor activity, novel object recognition (short-term memory), elevated plus maze (anxiety-like behavior), fixed interval (FI) schedule of food reward (learning, timing) and differential reinforcement of low rate (DRL) schedule of food reward (impulsivity, inability to inhibit responding). Neuropathology was assessed by measures of inflammation (glial fibrillary-acidic protein), myelin basic protein expression in the corpus callosum, and lateral ventricle area. RESULTS: Twenty-four hours following the final exposure day, no significant differences in anogenital distance, body weight or central nervous system pathological markers were observed in offspring of either sex. Nor were significant changes observed in novel object recognition, elevated plus maze performance, FI, or DRL schedule-controlled behavior in either females or males. CONCLUSION: The limited effect of neonatal exposure to ultrafine elemental carbon suggests this component of air pollution is not a substantial contributor to the behavioral alterations and neuropathology previously observed in response to ambient pollution particulate exposures. Rather, other more reactive constituent species, organic and/or inorganic, gas-phase components, or combinations of constituents may be involved. Defining these neurotoxic components is critical to the formulation of better animal models, more focused mechanistic assessments, and potential regulatory policies for air pollution.


Subject(s)
Air Pollutants/toxicity , Behavior, Animal/drug effects , Carbon/toxicity , Central Nervous System/drug effects , Inhalation Exposure/adverse effects , Nanoparticles/toxicity , Animals , Animals, Newborn , Biomarkers/metabolism , Central Nervous System/growth & development , Central Nervous System/metabolism , Central Nervous System/pathology , Female , Glial Fibrillary Acidic Protein/metabolism , Lung/drug effects , Lung/growth & development , Lung/pathology , Male , Mice, Inbred C57BL , Particle Size
4.
J Hist Sex ; 26(2): 273-293, 2017 05.
Article in English | MEDLINE | ID: mdl-28458500
5.
J Biol Chem ; 291(49): 25375-25386, 2016 Dec 02.
Article in English | MEDLINE | ID: mdl-27738107

ABSTRACT

The ubiquitous second messenger cAMP mediates signal transduction processes in the malarial parasite that regulate host erythrocyte invasion and the proliferation of merozoites. In Plasmodium falciparum, the central receptor for cAMP is the single regulatory subunit (R) of protein kinase A (PKA). To aid the development of compounds that can selectively dysregulate parasite PKA signaling, we solved the structure of the PKA regulatory subunit in complex with cAMP and a related analogue that displays antimalarial activity, (Sp)-2-Cl-cAMPS. Prior to signaling, PKA-R holds the kinase's catalytic subunit (C) in an inactive state by exerting an allosteric inhibitory effect. When two cAMP molecules bind to PKA-R, they stabilize a structural conformation that facilitates its dissociation, freeing PKA-C to phosphorylate downstream substrates such as apical membrane antigen 1. Although PKA activity was known to be necessary for erythrocytic proliferation, we show that uncontrolled induction of PKA activity using membrane-permeable agonists is equally disruptive to growth.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/chemistry , Cyclic AMP , Plasmodium falciparum/enzymology , Protozoan Proteins/chemistry , Allosteric Regulation , Cyclic AMP/analogs & derivatives , Cyclic AMP/chemistry , Cyclic AMP-Dependent Protein Kinases/antagonists & inhibitors , Cyclic AMP-Dependent Protein Kinases/metabolism , Protozoan Proteins/antagonists & inhibitors , Protozoan Proteins/metabolism
6.
Sci Rep ; 6: 34479, 2016 10 04.
Article in English | MEDLINE | ID: mdl-27698395

ABSTRACT

Central to the pathogenesis of malaria is the proliferation of Plasmodium falciparum parasites within human erythrocytes. Parasites invade erythrocytes via a coordinated sequence of receptor-ligand interactions between the parasite and host cell. One key ligand, Apical Membrane Antigen 1 (AMA1), is a leading blood-stage vaccine and previous work indicates that phosphorylation of its cytoplasmic domain (CPD) is important to its function during invasion. Here we investigate the significance of each of the six available phospho-sites in the CPD. We confirm that the cyclic AMP/protein kinase A (PKA) signalling pathway elicits a phospho-priming step upon serine 610 (S610), which enables subsequent phosphorylation in vitro of a conserved, downstream threonine residue (T613) by glycogen synthase kinase 3 (GSK3). Both phosphorylation steps are required for AMA1 to function efficiently during invasion. This provides the first evidence that the functions of key invasion ligands of the malaria parasite are regulated by sequential phosphorylation steps.


Subject(s)
Antigens, Protozoan/metabolism , Erythrocytes/parasitology , Malaria, Falciparum/metabolism , Membrane Proteins/metabolism , Plasmodium falciparum/metabolism , Protozoan Proteins/metabolism , Second Messenger Systems , Antigens, Protozoan/genetics , Cyclic AMP/genetics , Cyclic AMP/metabolism , Cyclic AMP-Dependent Protein Kinases/genetics , Cyclic AMP-Dependent Protein Kinases/metabolism , Erythrocytes/metabolism , Humans , Malaria, Falciparum/genetics , Malaria, Falciparum/pathology , Membrane Proteins/genetics , Phosphorylation/genetics , Plasmodium falciparum/genetics , Plasmodium falciparum/pathogenicity , Protein Domains , Protozoan Proteins/genetics
7.
Bioorg Med Chem ; 24(11): 2389-96, 2016 06 01.
Article in English | MEDLINE | ID: mdl-27112453

ABSTRACT

A series of isoquinolines have been evaluated in a homology model of Plasmodium falciparum Protein Kinase A (PfPKA) using molecular dynamics. Synthesis of these compounds was then undertaken to investigate their structure-activity relationships. One compound was found to inhibit parasite growth in an in vitro assay and provides a lead to further develop 3-methylisoquinoline-4-carbonitriles as antimalarial compounds. Development of a potent and selective PfPKA inhibitor would provide a useful tool to shed further insight into the mechanisms enabling malaria parasites to establish infection.


Subject(s)
Cyclic AMP-Dependent Protein Kinases/antagonists & inhibitors , Isoquinolines/pharmacology , Nitriles/pharmacology , Plasmodium falciparum/drug effects , Protein Kinase Inhibitors/pharmacology , Cyclic AMP-Dependent Protein Kinases/metabolism , Dose-Response Relationship, Drug , Isoquinolines/chemical synthesis , Isoquinolines/chemistry , Molecular Structure , Nitriles/chemical synthesis , Nitriles/chemistry , Parasitic Sensitivity Tests , Plasmodium falciparum/enzymology , Plasmodium falciparum/growth & development , Protein Kinase Inhibitors/chemical synthesis , Protein Kinase Inhibitors/chemistry , Structure-Activity Relationship
8.
Org Biomol Chem ; 14(20): 4617-39, 2016 May 18.
Article in English | MEDLINE | ID: mdl-27105169

ABSTRACT

Central to malaria pathogenesis is the invasion of human red blood cells by Plasmodium falciparum parasites. Following each cycle of intracellular development and replication, parasites activate a cellular program to egress from their current host cell and invade a new one. The orchestration of this process critically relies upon numerous organised phospho-signaling cascades, which are mediated by a number of central kinases. Parasite kinases are emerging as novel antimalarial targets as they have diverged sufficiently from their mammalian counterparts to allow selectable therapeutic action. Parasite protein kinase A (PfPKA) is highly expressed late in the cell cycle of the parasite blood stage and has been shown to phosphorylate a critical invasion protein, Apical Membrane Antigen 1. This enzyme could therefore be a valuable drug target so we have repurposed a substituted 4-cyano-3-methylisoquinoline that has been shown to inhibit rat PKA with the goal of targeting PfPKA. We synthesised a novel series of compounds and, although many potently inhibit the growth of chloroquine sensitive and resistant strains of P. falciparum, they were found to have minimal activity against PfPKA, indicating that they likely have another target important to parasite cytokinesis and invasion.


Subject(s)
Antimalarials/chemical synthesis , Antimalarials/pharmacology , Drug Design , Isoquinolines/chemical synthesis , Isoquinolines/pharmacology , Plasmodium falciparum/drug effects , Amino Acid Sequence , Antimalarials/chemistry , Chemistry Techniques, Synthetic , Cyclic AMP-Dependent Protein Kinases/antagonists & inhibitors , Cyclic AMP-Dependent Protein Kinases/chemistry , Drug Evaluation, Preclinical , Isoquinolines/chemistry , Plasmodium falciparum/enzymology , Plasmodium falciparum/growth & development
9.
J Oncol Pract ; 11(3): 219-22, 2015 May.
Article in English | MEDLINE | ID: mdl-25873062

ABSTRACT

PURPOSE: Assessment of distress and well-being of patients with cancer is not always documented or addressed in a clinical visit, reflecting a need for improved psychosocial screening. METHODS: A multidisciplinary team completed process mapping for emotional distress assessment in two clinics. Barriers were identified through cause-and-effect analysis, and an intervention was chosen. Patient-reported outcomes were collected over 6 months using the validated National Comprehensive Cancer Network Emotional Distress Thermometer (EDT) paper tool. The American Society of Clinical Oncology Quality Oncology Practice Initiative (QOPI) measures were compared before and after intervention. RESULTS: During 6 months, a total of 864 tools were collected from 1,344 patients in two ambulatory clinics (64%). Electronic medical record documentation of distress increased from 19.2% to 34% during the 6 months before and after intervention. QOPI measures showed an increase in emotional well-being documentation. Of 29 new and 835 return patients, 62% indicated mild distress (EDT, 0 to 3), 18% moderate (EDT, 4 to 6), and 11% severe (EDT, 7 to 10). The average distress score of new patients was significantly higher than that of return patients (5.39 [n = 26] v 2.52 [n = 754]; P < .001). The top problems for patients with moderate and severe distress were worry, fatigue, pain, and nervousness; depression and sadness were particularly noted in patients reporting severe distress. Eleven percent of patients were referred to the social worker on site. CONCLUSION: A pilot intervention collecting Patient-reported outcomes in two ambulatory clinics led to increase in psychosocial distress screening followed by sustained improvement, indicated by both process and QOPI measures.


Subject(s)
Ambulatory Care Facilities , Medical Oncology , Mental Health , Neoplasms/psychology , Stress, Psychological/diagnosis , Surveys and Questionnaires , Ambulatory Care Facilities/standards , Connecticut , Electronic Health Records , Humans , Medical Oncology/standards , Neoplasms/complications , Neoplasms/diagnosis , Neoplasms/therapy , Pilot Projects , Predictive Value of Tests , Quality Improvement , Quality Indicators, Health Care , Referral and Consultation , Risk Factors , Social Workers , Stress, Psychological/etiology , Stress, Psychological/psychology , Stress, Psychological/therapy , Time Factors , Workflow
10.
PLoS Pathog ; 11(2): e1004670, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25723550

ABSTRACT

During blood stage Plasmodium falciparum infection, merozoites invade uninfected erythrocytes via a complex, multistep process involving a series of distinct receptor-ligand binding events. Understanding each element in this process increases the potential to block the parasite's life cycle via drugs or vaccines. To investigate specific receptor-ligand interactions, they were systematically blocked using a combination of genetic deletion, enzymatic receptor cleavage and inhibition of binding via antibodies, peptides and small molecules, and the resulting temporal changes in invasion and morphological effects on erythrocytes were filmed using live cell imaging. Analysis of the videos have shown receptor-ligand interactions occur in the following sequence with the following cellular morphologies; 1) an early heparin-blockable interaction which weakly deforms the erythrocyte, 2) EBA and PfRh ligands which strongly deform the erythrocyte, a process dependant on the merozoite's actin-myosin motor, 3) a PfRh5-basigin binding step which results in a pore or opening between parasite and host through which it appears small molecules and possibly invasion components can flow and 4) an AMA1-RON2 interaction that mediates tight junction formation, which acts as an anchor point for internalization. In addition to enhancing general knowledge of apicomplexan biology, this work provides a rational basis to combine sequentially acting merozoite vaccine candidates in a single multi-receptor-blocking vaccine.


Subject(s)
Erythrocytes/parasitology , Host-Parasite Interactions , Malaria, Falciparum/blood , Malaria, Falciparum/parasitology , Plasmodium falciparum/pathogenicity , Receptors, Cell Surface/metabolism , Animals , Antigens, Protozoan/metabolism , Basigin/metabolism , Calcium/metabolism , Carrier Proteins/metabolism , Cell Shape , Cells, Cultured , Erythrocytes/metabolism , Erythrocytes/pathology , Host-Parasite Interactions/physiology , Ligands , Malaria, Falciparum/metabolism , Membrane Proteins/metabolism , Merozoites/metabolism , Merozoites/pathology , Plasmodium falciparum/metabolism , Protein Binding , Protozoan Proteins/metabolism , Rabbits , Signal Transduction
11.
Sci Rep ; 5: 8543, 2015 Feb 25.
Article in English | MEDLINE | ID: mdl-25712827

ABSTRACT

Over the past decade antiretroviral drugs have dramatically improved the prognosis for HIV-1 infected individuals, yet achieving better access to vulnerable populations remains a challenge. The principal obstacle to the CCR5-antagonist, maraviroc, from being more widely used in anti-HIV-1 therapy regimens is that the pre-treatment genotypic "tropism tests" to determine virus susceptibility to maraviroc have been developed primarily for HIV-1 subtype B strains, which account for only 10% of infections worldwide. We therefore developed PhenoSeq, a suite of HIV-1 genotypic tropism assays that are highly sensitive and specific for establishing the tropism of HIV-1 subtypes A, B, C, D and circulating recombinant forms of subtypes AE and AG, which together account for 95% of HIV-1 infections worldwide. The PhenoSeq platform will inform the appropriate use of maraviroc and future CCR5 blocking drugs in regions of the world where non-B HIV-1 predominates, which are burdened the most by the HIV-1 pandemic.


Subject(s)
HIV-1/physiology , Viral Tropism/genetics , Algorithms , Amino Acid Sequence , CCR5 Receptor Antagonists/therapeutic use , Computational Biology , Cyclohexanes/therapeutic use , Genotype , HIV Envelope Protein gp120/chemistry , HIV Envelope Protein gp120/genetics , HIV Envelope Protein gp120/metabolism , HIV Infections/drug therapy , Humans , Maraviroc , Mutation , Peptide Fragments/chemistry , Peptide Fragments/genetics , Peptide Fragments/metabolism , Phenotype , Receptors, CCR5/chemistry , Receptors, CCR5/metabolism , Triazoles/therapeutic use
12.
Cancer Prev Res (Phila) ; 8(5): 359-64, 2015 May.
Article in English | MEDLINE | ID: mdl-25712053

ABSTRACT

The ratio of omega-3 to omega-6 fatty acids, especially the long-chain eicosapentaenoic acid (EPA) + docosahexaenoic acid (DHA) to arachidonic acid (AA) ratio, is inversely associated with breast cancer risk. We measured the association between cytologic atypia, a biomarker for short-term risk of breast cancer development, and omega-3 and omega-6 fatty acid intake and levels in blood and breast tissue. Blood and benign breast tissue, sampled by random periareolar fine-needle aspiration (RPFNA), was obtained from 70 women at elevated risk for breast cancer. Self-reported dietary intake was assessed by the NCI's Food Frequency Questionnaire. The fatty acid composition of five lipid compartments, red blood cell, plasma and breast phospholipids, and plasma and breast triaclyglycerides (TAG), was analyzed by gas chromatography as weight percent. Median daily intakes of EPA+DHA and total omega-3 fatty acids were 80 mg and 1.1 g, respectively. The median total omega-3:6 intake ratio was 1:10. Compared with women without atypia, those with cytologic atypia had lower total omega-3 fatty acids in red blood cell and plasma phospholipids and lower omega-3:6 ratios in plasma TAGs and breast TAGs (P < 0.05). The EPA+DHA:AA ratio in plasma TAGs was also lower among women with atypia. This is the first report of associations between tissue levels of omega-3 and omega-6 fatty acids and a reversible tissue biomarker of breast cancer risk. RPFNA cytomorphology could serve as a surrogate endpoint for breast cancer prevention trials of omega-3 fatty acid supplementation.


Subject(s)
Breast/metabolism , Breast/pathology , Fatty Acids, Omega-3/metabolism , Fatty Acids, Omega-6/metabolism , Adult , Biopsy, Fine-Needle , Breast/chemistry , Breast Neoplasms/metabolism , Breast Neoplasms/pathology , Cross-Sectional Studies , Eating/physiology , Fatty Acids, Omega-3/analysis , Fatty Acids, Omega-3/blood , Fatty Acids, Omega-6/analysis , Fatty Acids, Omega-6/blood , Female , Humans , Middle Aged , Nutrition Surveys , Risk Factors
13.
ACS Chem Biol ; 10(4): 1145-54, 2015 Apr 17.
Article in English | MEDLINE | ID: mdl-25555060

ABSTRACT

Apicomplexan parasites, including Plasmodium falciparum and Toxoplasma gondii, the causative agents of severe malaria and toxoplasmosis, respectively, undergo several critical developmental transitions during their lifecycle. Most important for human pathogenesis is the asexual cycle, in which parasites undergo rounds of host cell invasion, replication, and egress (exit), destroying host cell tissue in the process. Previous work has identified important roles for Protein Kinase G (PKG) and Protein Kinase A (PKA) in parasite egress and invasion, yet little is understood about the regulation of cyclic nucleotides, cGMP and cAMP, that activate these enzymes. To address this, we have focused upon the development of inhibitors of 3',5'-cyclic nucleotide phosphodiesterases (PDEs) to block the breakdown of cyclic nucleotides. This was done by repurposing human PDE inhibitors noting various similarities of the human and apicomplexan PDE binding sites. The most potent inhibitors blocked the in vitro proliferation of P. falciparum and T. gondii more potently than the benchmark compound zaprinast. 5-Benzyl-3-isopropyl-1H-pyrazolo[4,3-d]pyrimidin-7(6H)-one (BIPPO) was found to be a potent inhibitor of recombinant P. falciparum PfPDEα and activated PKG-dependent egress of T. gondii and P. falciparum, likely by promoting the exocytosis of micronemes, an activity that was reversed by a specific Protein Kinase G inhibitor. BIPPO also promotes cAMP-dependent phosphorylation of a P. falciparum ligand critical for host cell invasion, suggesting that the compound inhibits single or multiple PDE isoforms that regulate both cGMP and cAMP levels. BIPPO is therefore a useful tool for the dissection of signal transduction pathways in apicomplexan parasites.


Subject(s)
Phosphodiesterase Inhibitors/chemistry , Phosphodiesterase Inhibitors/pharmacology , Plasmodium falciparum/drug effects , Toxoplasma/drug effects , Antiprotozoal Agents/chemical synthesis , Antiprotozoal Agents/chemistry , Antiprotozoal Agents/pharmacology , Chemistry Techniques, Synthetic , Cyclic AMP/metabolism , Cyclic GMP/metabolism , Drug Evaluation, Preclinical/methods , Female , Humans , Phosphodiesterase Inhibitors/chemical synthesis , Phosphorylation/drug effects , Plasmodium falciparum/physiology , Purinones/pharmacology , Pyrazoles/chemistry , Pyrazoles/pharmacology , Pyrimidinones/chemistry , Pyrimidinones/pharmacology , Sequence Alignment , Sequence Homology, Amino Acid , Structural Homology, Protein , Toxoplasma/enzymology , Toxoplasma/physiology
14.
PLoS One ; 9(10): e109771, 2014.
Article in English | MEDLINE | ID: mdl-25313689

ABSTRACT

The ability to determine coreceptor usage of patient-derived human immunodeficiency virus type 1 (HIV-1) strains is clinically important, particularly for the administration of the CCR5 antagonist maraviroc. The envelope glycoprotein (Env) determinants of coreceptor specificity lie primarily within the gp120 V3 loop region, although other Env determinants have been shown to influence gp120-coreceptor interactions. Here, we determined whether conserved amino acid alterations outside the V3 loop that contribute to coreceptor usage exist, and whether these alterations improve the performance of V3 sequence-based coreceptor usage prediction algorithms. We demonstrate a significant covariant association between charged amino acids at position 322 in V3 and position 440 in the C4 Env region that contributes to the specificity of HIV-1 subtype B strains for CCR5 or CXCR4. Specifically, positively charged Lys/Arg at position 322 and negatively charged Asp/Glu at position 440 occurred more frequently in CXCR4-using viruses, whereas negatively charged Asp/Glu at position 322 and positively charged Arg at position 440 occurred more frequently in R5 strains. In the context of CD4-bound gp120, structural models suggest that covariation of amino acids at Env positions 322 and 440 has the potential to alter electrostatic interactions that are formed between gp120 and charged amino acids in the CCR5 N-terminus. We further demonstrate that inclusion of a "440 rule" can improve the sensitivity of several V3 sequence-based genotypic algorithms for predicting coreceptor usage of subtype B HIV-1 strains, without compromising specificity, and significantly improves the AUROC of the geno2pheno algorithm when set to its recommended false positive rate of 5.75%. Together, our results provide further mechanistic insights into the intra-molecular interactions within Env that contribute to coreceptor specificity of subtype B HIV-1 strains, and demonstrate that incorporation of Env determinants outside V3 can improve the reliability of coreceptor usage prediction algorithms.


Subject(s)
HIV Envelope Protein gp120/chemistry , HIV-1/chemistry , Algorithms , Amino Acid Sequence , Attachment Sites, Microbiological , Conserved Sequence , Host Specificity , Humans , Models, Molecular , Receptors, CCR5/chemistry , Receptors, CXCR4/chemistry , Virus Attachment
15.
Int J Parasitol ; 44(12): 853-7, 2014 Oct 15.
Article in English | MEDLINE | ID: mdl-25157917

ABSTRACT

Apicomplexan parasites are obligate intracellular pathogens that cause a host of human and animal diseases. These parasites have developed a universal mechanism of invasion involving formation of a 'moving junction' that provides a stable anchoring point through which the parasite invades host cells. The composition of the moving junction, particularly the presence of the protein Apical Membrane Antigen 1 (AMA1), has recently been the subject of some controversy. In this commentary we review findings that led to the current model of the moving junction complex and dissect the major conflicts to determine whether a substantial reassessment of the role of AMA1 is justified.


Subject(s)
Antigens, Protozoan/metabolism , Apicomplexa/pathogenicity , Membrane Proteins/metabolism , Plasmodium falciparum/pathogenicity , Protozoan Proteins/metabolism , Toxoplasma/pathogenicity , Animals , Antigens, Protozoan/chemistry , Apicomplexa/immunology , Apicomplexa/metabolism , Host-Parasite Interactions , Humans , Ligands , Membrane Proteins/chemistry , Models, Biological , Plasmodium falciparum/immunology , Plasmodium falciparum/metabolism , Protozoan Proteins/chemistry , Toxoplasma/immunology , Toxoplasma/metabolism
16.
Int J Parasitol ; 42(6): 567-73, 2012 May 15.
Article in English | MEDLINE | ID: mdl-22710063

ABSTRACT

Multiple and seemingly sequential interactions between parasite ligands and their receptors on host erythrocytes are an essential precursor to invasion by the obligate intracellular pathogen, Plasmodium falciparum. Consequently, identification and characterisation of the specific effectors that facilitate these recognition events are of special interest for the development of novel therapeutic and prophylactic solutions to malaria. There have been many recent advances regarding the identification of host-parasite receptor-ligand pairs, however the precise function and temporal aspects of these interactions are far from resolved. This review provides an update on the current details of these interactions to place them in sequence and super impose them upon the known kinetic events of invasion.


Subject(s)
Endocytosis , Erythrocytes/parasitology , Host-Pathogen Interactions , Plasmodium falciparum/pathogenicity , Animals , Humans , Models, Biological
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