Genetic justification of COVID-19 patient outcomes using DERGA, a novel data ensemble refinement greedy algorithm.

Complement inhibition has shown promise in various disorders, including COVID-19. A prediction tool including complement genetic variants is vital. This study aims to identify crucial complement-related variants and determine an optimal pattern for accurate disease outcome prediction. Genetic data from 204 COVID-19 patients hospitalized between April 2020 and April 2021 at three referral centres were analysed using an artificial intelligence-based algorithm to predict disease outcome (ICU vs. non-ICU admission). A recently introduced alpha-index identified the 30 most predictive genetic variants. DERGA algorithm, which employs multiple classification algorithms, determined the optimal pattern of these key variants, resulting in 97% accuracy for predicting disease outcome. Individual variations ranged from 40 to 161 variants per patient, with 977 total variants detected. This study demonstrates the utility of alpha-index in ranking a substantial number of genetic variants. This approach enables the implementation of well-established classification algorithms that effectively determine the relevance of genetic variants in predicting outcomes with high accuracy.

Advanced Tree-Based Techniques for Predicting Unconfined Compressive Strength of Rock Material Employing Non-Destructive and Petrographic Tests.

The accurate estimation of rock strength is an essential task in almost all rock-based projects, such as tunnelling and excavation. Numerous efforts to create indirect techniques for calculating unconfined compressive strength (UCS) have been attempted. This is often due to the complexity of collecting and completing the abovementioned lab tests. This study applied two advanced machine learning techniques, including the extreme gradient boosting trees and random forest, for predicting the UCS based on non-destructive tests and petrographic studies. Before applying these models, a feature selection was conducted using a Pearson's Chi-Square test. This technique selected the following inputs for the development of the gradient boosting tree (XGBT) and random forest (RF) models: dry density and ultrasonic velocity as non-destructive tests, and mica, quartz, and plagioclase as petrographic results. In addition to XGBT and RF models, some empirical equations and two single decision trees (DTs) were developed to predict UCS values. The results of this study showed that the XGBT model outperforms the RF for UCS prediction in terms of both system accuracy and error. The linear correlation of XGBT was 0.994, and its mean absolute error was 0.113. In addition, the XGBT model outperformed single DTs and empirical equations. The XGBT and RF models also outperformed KNN (R = 0.708), ANN (R = 0.625), and SVM (R = 0.816) models. The findings of this study imply that the XGBT and RF can be employed efficiently for predicting the UCS values.

Genetic prediction of ICU hospitalization and mortality in COVID-19 patients using artificial neural networks.

There is an unmet need of models for early prediction of morbidity and mortality of Coronavirus disease-19 (COVID-19). We aimed to a) identify complement-related genetic variants associated with the clinical outcomes of ICU hospitalization and death, b) develop an artificial neural network (ANN) predicting these outcomes and c) validate whether complement-related variants are associated with an impaired complement phenotype. We prospectively recruited consecutive adult patients of Caucasian origin, hospitalized due to COVID-19. Through targeted next-generation sequencing, we identified variants in complement factor H/CFH, CFB, CFH-related, CFD, CD55, C3, C5, CFI, CD46, thrombomodulin/THBD, and A Disintegrin and Metalloproteinase with Thrombospondin motifs (ADAMTS13). Among 381 variants in 133 patients, we identified 5 critical variants associated with severe COVID-19: rs2547438 (C3), rs2250656 (C3), rs1042580 (THBD), rs800292 (CFH) and rs414628 (CFHR1). Using age, gender and presence or absence of each variant, we developed an ANN predicting morbidity and mortality in 89.47% of the examined population. Furthermore, THBD and C3a levels were significantly increased in severe COVID-19 patients and those harbouring relevant variants. Thus, we reveal for the first time an ANN accurately predicting ICU hospitalization and death in COVID-19 patients, based on genetic variants in complement genes, age and gender. Importantly, we confirm that genetic dysregulation is associated with impaired complement phenotype.

Intelligent ground vibration prediction in surface mines using an efficient soft computing method based on field data.

Ground vibration induced by blasting operations is considered one of the most common environmental effects of mining projects. A strong ground vibration can destroy buildings and structures, hence its prediction and minimization are of high importance. The aim of this study is to estimate the ground vibration through a hybrid soft computing (SC) method, called RSM-SVR, which comprises two main regression techniques: the response surface model (RSM) and support vector regression (SVR). The RSM-SVR model applies an RSM in the first calibrating process and an SVR in the second calibrating process to improve the accuracy of the ground vibration predictions. The predicted results of an RSM, which are obtained using the input data of problems, are used as the input dataset for the regression process of an SVR. The effectiveness and agreement of the RSM-SVR model were compared to those of an SVR optimized with the particle swarm optimization (PSO) and genetic algorithm (GA), RSM, and multivariate linear regression (MLR) based on several statistical factors. The findings confirmed that the RSM-SVR model was considerably superior to other models in terms of accuracy. The amounts of coefficient of determination (R 2) were 0.896, 0.807, 0.782, 0.752, 0.711, and 0.664 obtained from the RSM-SVR, PSO-SVR, GA-SVR, MLR, SVR, and RSM models, respectively.

Development of GP and GEP models to estimate an environmental issue induced by blasting operation.

Air overpressure (AOp) is one of the most adverse effects induced by blasting in the surface mines and civil projects. So, proper evaluation and estimation of the AOp is important for minimizing the environmental problems resulting from blasting. The main aim of this study is to estimate AOp produced by blasting operation in Miduk copper mine, Iran, developing two artificial intelligence models, i.e., genetic programming (GP) and gene expression programming (GEP). Then, the accuracy of the GP and GEP models has been compared to multiple linear regression (MLR) and three empirical models. For this purpose, 92 blasting events were investigated, and subsequently, the AOp values were carefully measured. Moreover, in each operation, the values of maximum charge per delay and distance from blast points, as two effective parameters on the AOp, were measured. After predicting by the predictive models, their performance prediction was checked in terms of variance account for (VAF), coefficient of determination (CoD), and root mean square error (RMSE). Finally, it was found that the GEP with VAF of 94.12%, CoD of 0.941, and RMSE of 0.06 is a more precise model than other predictive models for the AOp prediction in the Miduk copper mine, and it can be introduced as a new powerful tool for estimating the AOp resulting from blasting.