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1.
J Zhejiang Univ Sci B ; 14(7): 578-85, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23825143

ABSTRACT

Ascorbate peroxidases are directly involved in reactive oxygen species (ROS) scavenging by reducing hydrogen peroxide to water. The tomato thylakoid-bound ascorbate peroxidase gene (StAPX) was introduced into tobacco. RNA gel blot analysis confirmed that StAPX in tomato leaves was induced by methylviologen-mediated oxidative stress. The sense transgenic seedlings exhibited higher tAPX activity than that of the wild type (WT) plants under oxidative stress conditions, while the antisense seedlings exhibited lower tAPX activity. Lower APX activities of antisense transgenic seedlings caused higher malondialdehyde contents and relative electrical conductivity. The sense transgenic seedlings with higher tAPX activity maintained higher chlorophyll content and showed the importance of tAPX in maintaining the optimal chloroplast development under methylviologen stress conditions, whereas the antisense lines maintained lower chlorophyll content than WT seedlings. Results indicated that the over-expression of StAPX enhanced tolerance to methylviologen-mediated oxidative stress in sense transgenic tobacco early seedlings, whereas the suppression of StAPX in antisense transgenic seedlings showed high sensitivity to oxidative stress.


Subject(s)
Ascorbate Peroxidases/biosynthesis , Ascorbate Peroxidases/genetics , Gene Expression Regulation, Plant , Nicotiana/physiology , Oxidative Stress , Paraquat/chemistry , Antioxidants/chemistry , Chlorophyll/chemistry , Chloroplasts/genetics , Electric Conductivity , Herbicides/chemistry , Solanum lycopersicum/enzymology , Malondialdehyde/chemistry , Oligonucleotides, Antisense/genetics , Phenotype , Plants, Genetically Modified/genetics , Seedlings/genetics , Stress, Physiological , Nicotiana/genetics
2.
BMC Genomics ; 10: 91, 2009 Feb 25.
Article in English | MEDLINE | ID: mdl-19243590

ABSTRACT

BACKGROUND: Baculoviruses are well known for their potential as biological agents for controlling agricultural and forest pests. They are also widely used as expression vectors in molecular cloning studies. The genome sequences of 48 baculoviruses are currently available in NCBI databases. As the number of sequenced viral genomes increases, it is important for the authors to present sufficiently detailed analyses and annotations to advance understanding of them. In this study, the complete genome of Clanis bilineata nucleopolyhedrovirus (ClbiNPV) has been sequenced and analyzed in order to understand this virus better. RESULTS: The genome of ClbiNPV contains 135,454 base pairs (bp) with a G+C content of 37%, and 139 putative open reading frames (ORFs) of at least 150 nucleotides. One hundred and twenty-six of these ORFs have homologues with other baculovirus genes while the other 13 are unique to ClbiNPV. The 30 baculovirus core genes are all present in ClbiNPV. Phylogenetic analysis based on the combined pif-2 and lef-8 sequences places ClbiNPV in the Group II Alphabaculoviruses. This result is consistent with the absence of gp64 from the ClbiNPV genome and the presence instead of a fusion protein gene, characteristic of Group II. Blast searches revealed that ClbiNPV encodes a photolyase-like gene sequence, which has a 1-bp deletion when compared with photolyases of other baculoviruses. This deletion disrupts the sequence into two small photolyase ORFs, designated Clbiphr-1 and Clbiphr-2, which correspond to the CPD-DNA photolyase and FAD-binding domains of photolyases, respectively. CONCLUSION: ClbiNPV belongs to the Group II Alphabaculoviruses and is most closely related to OrleNPV, LdMNPV, TnSNPV, EcobNPV and ChchNPV. It contains a variant DNA photolyase gene, which only exists in ChchNPV, TnSNPV and SpltGV among the baculoviruses.


Subject(s)
Genome, Viral , Lepidoptera/virology , Nucleopolyhedroviruses/genetics , Animals , Base Composition , Base Sequence , DNA, Viral/genetics , Deoxyribodipyrimidine Photo-Lyase/genetics , Genes, Viral , Larva/virology , Open Reading Frames , Phylogeny , Sequence Analysis, DNA , Sequence Deletion
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