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1.
Biochemistry ; 48(15): 3417-24, 2009 Apr 21.
Article in English | MEDLINE | ID: mdl-19265433

ABSTRACT

Superoxide dismutase (SOD) enzymes are critical in controlling levels of reactive oxygen species (ROS) that are linked to aging, cancer, and neurodegenerative disease. Superoxide (O(2)(*-)) produced during respiration is removed by the product of the SOD2 gene, the homotetrameric manganese superoxide dismutase (MnSOD). Here, we examine the structural and catalytic roles of the highly conserved active-site residue Tyr34, based upon structure-function studies of MnSOD enzymes with mutations at this site. Substitution of Tyr34 with five different amino acids retained the active-site protein structure and assembly but caused a substantial decrease in the catalytic rate constant for the reduction of superoxide. The rate constant for formation of the product inhibition complex also decreases but to a much lesser extent, resulting in a net increase in the level of product inhibited form of the mutant enzymes. Comparisons of crystal structures and catalytic rates also suggest that one mutation, Y34V, interrupts the hydrogen-bonded network, which is associated with a rapid dissociation of the product-inhibited complex. Notably, with three of the Tyr34 mutants, we also observe an intermediate in catalysis, which has not been reported previously. Thus, these mutants establish a means of trapping a catalytic intermediate that promises to help elucidate the mechanism of catalysis.


Subject(s)
Manganese/chemistry , Superoxide Dismutase/chemistry , Superoxide Dismutase/metabolism , Tyrosine/chemistry , Catalysis , Catalytic Domain/genetics , Conserved Sequence , Crystallography, X-Ray , DNA Mutational Analysis , Humans , Kinetics , Manganese/metabolism , Oxidation-Reduction , Structure-Activity Relationship , Superoxide Dismutase/antagonists & inhibitors , Superoxide Dismutase/genetics , Superoxides/metabolism , Tyrosine/genetics
2.
Biochemistry ; 43(22): 7038-45, 2004 Jun 08.
Article in English | MEDLINE | ID: mdl-15170341

ABSTRACT

The side chain of Gln143, a conserved residue in manganese superoxide dismutase (MnSOD), forms a hydrogen bond with the manganese-bound solvent and is critical in maintaining catalytic activity. The side chains of Tyr34 and Trp123 form hydrogen bonds with the carboxamide of Gln143. We have replaced Tyr34 and Trp123 with Phe in single and double mutants of human MnSOD and measured their catalytic activity by stopped-flow spectrophotometry and pulse radiolysis. The replacements of these side chains inhibited steps in the catalysis as much as 50-fold; in addition, they altered the gating between catalysis and formation of a peroxide complex to yield a more product-inhibited enzyme. The replacement of both Tyr34 and Trp123 in a double mutant showed that these two residues interact cooperatively in maintaining catalytic activity. The crystal structure of Y34F/W123F human MnSOD at 1.95 A resolution suggests that this effect is not related to a conformational change in the side chain of Gln143, which does not change orientation in Y34F/W123F, but rather to more subtle electronic effects due to the loss of hydrogen bonding to the carboxamide side chain of Gln143. Wild-type MnSOD containing Trp123 and Tyr34 has approximately the same thermal stability compared with mutants containing Phe at these positions, suggesting the hydrogen bonds formed by these residues have functional rather than structural roles.


Subject(s)
Hydrogen Bonding , Superoxide Dismutase/chemistry , Binding Sites , Calorimetry, Differential Scanning , Catalysis , Catalytic Domain , Crystallography, X-Ray , Glutamine/chemistry , Glutamine/genetics , Glutamine/metabolism , Humans , Manganese/chemistry , Manganese/metabolism , Mutagenesis, Site-Directed , Mutation , Protein Conformation , Spectrophotometry , Superoxide Dismutase/metabolism
3.
J Biol Chem ; 279(13): 12769-76, 2004 Mar 26.
Article in English | MEDLINE | ID: mdl-14688256

ABSTRACT

Mn-SOD serves as the primary cellular defense against oxidative damage by converting superoxide radicals (O(2)(-)) to O(2) and H(2)O(2). A unique characteristic of this mitochondrial anti-oxidant enzyme is the conservation from bacteria to man of a rapidly formed product inhibited state. Using site-directed mutagenesis, we have generated an active site mutant (H30N) of human Mn-SOD, which exhibits significantly reduced product inhibition and increased enzymatic efficiency. Overexpression of the H30N enzyme causes anti-proliferative effects in vitro and anti-tumor effects in vivo. Our results provide a teleological basis for the phylogenetically invariant nature of position His-30 and the evolutionary conservation of product inhibition. These data also provide more direct intracellular evidence for the signaling role associated with H(2)O(2).


Subject(s)
Mutation , Oxygen/metabolism , Superoxide Dismutase/genetics , Animals , Antioxidants/metabolism , Binding Sites , Blotting, Northern , Catalase/metabolism , Catalysis , Cell Division , Cell Line , Crystallography, X-Ray , DNA, Complementary/metabolism , Evolution, Molecular , Genetic Vectors , Green Fluorescent Proteins , Histidine/chemistry , Humans , Hydrogen Peroxide/pharmacology , Immunoblotting , Luminescent Proteins/metabolism , Mice , Mice, SCID , Mitochondria/metabolism , Models, Chemical , Models, Genetic , Models, Molecular , Mutagenesis, Site-Directed , Phylogeny , Plasmids/metabolism , Retroviridae/genetics , Signal Transduction , Time Factors , Transfection
4.
J Biol Chem ; 279(7): 5861-6, 2004 Feb 13.
Article in English | MEDLINE | ID: mdl-14638684

ABSTRACT

The side chains of His30 and Tyr166 from adjacent subunits in the homotetramer human manganese superoxide dismutase (Mn-SOD) form a hydrogen bond across the dimer interface and participate in a hydrogen-bonded network that extends to the active site. Compared with wild-type Mn-SOD, the site-specific mutants H30N, Y166F, and the corresponding double mutant showed 10-fold decreases in steady-state constants for catalysis measured by pulse radiolysis. The observation of no additional effect upon the second mutation is an example of cooperatively interacting residues. A similar effect was observed in the thermal stability of these enzymes; the double mutant did not reduce the major unfolding transition to an extent greater than either single mutant. The crystal structures of these site-specific mutants each have unique conformational changes, but each has lost the hydrogen bond across the dimer interface, which results in a decrease in catalysis. These same mutations caused an enhancement of the dissociation of the product-inhibited complex. That is, His30 and Tyr166 in wild-type Mn-SOD act to prolong the lifetime of the inhibited complex. This would have a selective advantage in blocking a cellular overproduction of toxic H2O2.


Subject(s)
Amino Acids/chemistry , Superoxide Dismutase/chemistry , Binding Sites , Calorimetry, Differential Scanning , Catalysis , Crystallography, X-Ray , Dimerization , Escherichia coli/metabolism , Histidine/chemistry , Humans , Hydrogen Bonding , Hydrogen Peroxide/chemistry , Kinetics , Models, Chemical , Models, Molecular , Mutation , Oxidation-Reduction , Protein Folding , Spectrophotometry , Time Factors , X-Ray Diffraction
5.
Biochemistry ; 42(10): 2781-9, 2003 Mar 18.
Article in English | MEDLINE | ID: mdl-12627943

ABSTRACT

Catalysis of the disproportionation of superoxide by human manganese superoxide dismutase (MnSOD) is characterized by an initial burst of catalysis followed by a much slower region that is zero order in superoxide and due to a product inhibition by peroxide anion. We have prepared site-specific mutants with replacements at His30, the side chain of which lies along the substrate access channel and is about 5.8 A from the metal. Using pulse radiolysis to generate superoxide, we have determined that kcat/K(m) was decreased and product inhibition increased for H30V MnSOD, both by 1-2 orders of magnitude, compared with wild type, H30N, and H30Q MnSOD. These effects are not attributed to the redox potentials, which are similar for all of these variants. An investigation of the crystal structure of H30V Mn(III)SOD compared with wild type, H30Q, and H30N Mn(III)SOD showed the positions of two gamma carbons of Val30 in the active site; Cgamma1 overlaps Cgamma of His30 in wild type, and Cgamma2 extends into the substrate access channel and occupies the approximate position of a water molecule in the wild type. The data suggest that Cgamma2 of the Val side chain has significantly interrupted catalysis by this overlap into the access channel with possible overlap with the substrate-product binding site. This is supported by comparison of the crystal structure of H30V MnSOD with that of azide bound to Mn(III)SOD from Thermus thermophilus and by visible absorption spectra showing that azide binding to the metal in H30V Mn(III)SOD is abolished. Moreover, the presence of Val30 caused a 100-fold decrease in the rate constant for dissociation of the product-inhibited complex compared with wild type.


Subject(s)
Amino Acid Substitution , Catalytic Domain , Histidine/chemistry , Superoxide Dismutase/chemistry , Valine/chemistry , Amino Acid Substitution/genetics , Azides/chemistry , Binding Sites/genetics , Carbon/chemistry , Catalysis , Catalytic Domain/genetics , Crystallization , Crystallography, X-Ray , Histidine/genetics , Humans , Manganese/chemistry , Mutagenesis, Site-Directed , Oxidation-Reduction , Substrate Specificity/genetics , Superoxide Dismutase/antagonists & inhibitors , Superoxide Dismutase/genetics , Thermus thermophilus/enzymology , Valine/genetics
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